Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          ----------->GT1                                   <---------YAB1                                 --------->YAB1    <---------YAB1                                 <---------ICU4  --------->YAB1               <-------TEIL --------YAB1                 --------->YAB1    --------->ICU4                ------->TEIL  <-------- ----DOF2        <----------DOF2--------->ICU4  <---------ATHB12          --------------->AtSPL8   tatatttgggaatttctcactttgtgaaactttcatcatgaatagtacaaatgatgatatatactactaaattcaaaatgtacataatcgaattgatgtt  23626500                                                                             -------->ATHB1                                                          <---------ALFIN1   --------->ATHB12                                                        <-----------GT1      --------->ATHB51                                                    <--------ATHB1          --------->AHL20(2)                                                   --------->ICU4           <---------AHL20(2)                                              --------->ANAC46              <---------ATHB51                    <---------AHL20(2)        --------->ANAC58              --------->ICU4  ---------                    --------->AHL20(2)        <---------ANAC55(2)     --------->ANAC58      <--------        <---------YAB1                        --------->ANAC58        --------->ANAC46      <--------        --------->ICU4                        --------->ANAC55(2)     --------->ANAC58      --------- -TOE2(3)--------->ATHB12                    <---------LBD16       --------->MYB46(3)       ---------   atattttgacatgatttcatatttaaataagaaacagaattagtgactacggaataattcacaccctcatccactcaaattattgatatttgaaaatctg  23626600                                                                                          <----------                                                                                         <---------MYB59                                                                                  <------------CBF                                                                                 --------->ATHB51        <----------ID1                                                           <------------ATHB5        <------ZmHOX2a(1)                                                        --------->ATHB12      --------->ANAC58                                                           -------->HAHB4      <---------------AtSPL8                                  ------>ZmHOX2a(1)  <---------ICU4      --------->ANAC58                                 ------>NtERF2             <--------ATHB1 >ARR14(2)                                         --------->ANAC58             --------->AHL20(2) -ARR14(2)                                 <-----------TBP ------>MYB83         <---------AHL20(2) -ARR11(3)                      <----------DOF2    --------->ANAC58             <---------ATHB51 ---- >GLK1(2)                   <------ZmHOX2a(1)--------->YAB1------>MYB46(1)    --------->YAB1     ---- >ARR11(3) --------->MYB46(3)<---------ARR14(2)    --------->ANAC46         --------->ICU4===========   ggtctgataaggaacaaactaaaatatagaggaacttttgtgaatatttataaacgcgaccttcctcttagttgggccataaataattgggcctaaatta  23626700                                                                                          ------>NtERF2                                  ---------->TaMYB80                                    --------->ATERF1(1)                                  ----------->ARR10                                     --------->DEAR4(2)                              <------MYB46(1)                                   <---------GLK1(2)----                              ----------->GT1                            --------->ATERF1(1)---------                             <---------MYB46(3)                          <------NtERF2 --------->ABI4(1)                             --------->MYB55(2)                         ------>NtERF2  <---------ATERF1(1)                      <---------ICU4                                    <---------ATERF1(1) <--------                      --------->ATHB12                                 <---------DEAR3(1)------->GAMYB                      --------->ATHB51                                 --------->DEAR3(1)<---------ALFIN1            --------->MYB52(1)<------MYB83                            <------NtERF2    ------>NtERF2         --------->YAB1<------------CBF                               --------->RAP2.3(1)--------->DEAR3(1)    ------------>CBF  -------->ATHB1                                  --------->ATERF1(1)--------->DREB2C(2)  <---------ARR14(2) --------->ICU4    --------->ANAC46              <---------RAP2.3(1)<------NtERF2  --------->ARR14(2) <---------ATHB51  <---------ETT(1)              <---------ATERF1(1)--------->ORA47(2) --------->GLK1(1)   <---------YAB1 <---------ARR14(2)           --------->ANAC46     --------->DEAR3(1) -----AGL15 <---------ICU4  <---------ANAC46         <-----------GT1 ------>NtERF2 --------->ANAC58 ----->ANAC58     <-----------------AGL3           <----------DOF2  <---------DEAR3(1)<---------ALFIN1 ----->ANAC58     ------------>ATHB5--------->ARR14(2)     <----------DOF2 ------>NtERF2--------->MYB46(3) ===================================MADS_MADS<---------GLK1(2)   ----------->HVH21 --------->ANAC58   agcaaatccaatactaatggcccattattggtgggtaatatccgacaaattctctttacctctttctacgacggcgacgactgaatcgccaccgccttcc  23626800                                                      ----------->HVH21                                                    <---------At4g35610   ------>NtERF2              <----------DOF2       --------->At4g35610  --------->DEAR3(1)    <-----------GT1             ----------->RAV1(2) ----->ANAC46          --------->ZAT14     <------ZmHOX2a(2)                                     ---- >DEAR3(1)        ----------->RAV1(2)     <-----------HVH21                                      ---- --DOF2         <---------ALFIN1     <---------WRKY18(1)    <----------DOF2       <------ZmHOX2a(1)   cgctccgactcttgacttccacctgtttactcctttgctagaccgatcagacccatctgaagcttttctgtctagagtagagaaggagatgggcaaaccc  23626900                           <-------TEIL                  ---------->DOF2     <-----------RAV1(2)      --------->At4g35610------->PIF5--------->ZAT2     --------->GLK1(2)   <-------PIF5<---------ZAT2    <----------DOF2     --------->AHL20(2)   --------->GLK1(1)    --------->ANAC58           ---------->ID1          <---------AHL20(2)  <-----   <---------GLK1(1)    --------->ANAC58     --------->ICU4             --------->TOE2(3)   <-------- ----->MYB52(1)--------->ANAC58      <---------At4g35610              <---------TOE2(3)  <----------DOF2 ------>DOF2   --------->ANAC58      --------->At4g35610              <---------TOE1(3)  <---------DAG2   aaaggagatgctgcaagaagcaaagcacgtccatctagcagcaggtcatatttgttcctttaatctcttcttaacgtttaatttcttccgactttatctt  23627000                                                                                                  <--                                                                                                  <--                                                                                                 <---                                                                                              <------                                                                                              -------                                                                                             --------                                                                                             <------NtERF2                                                                                           --------->RAP2.6(2)                                                                                           --------->RAP2.3(3)                                                                                          --------->RAP2.6(1)                                                                                          --------->RRTF1(1)                                                                                          --------->DEAR3(2)                                                                                          --------->MYB46(3)                                                                                          --------->RAP2.3(1)                                                                                          --------->ERF1                                                                                         <---------At4g35610                                                                             <---------MYB52(1)  <---                                                                             ----------->RAV1(2)<----                                                                            <---------RAP2.6(3)<-----                                                                            <---------SPL7--------->ATERF1(1)                           <------MYB46(1)                                 <---------ANAC58--------->RAP2.3(2)                           <------MYB83                                    <---------ANAC58------->GAMYB                          --------->MYB59                      <---------GLK1(2)         <---------ATERF1(1)                          --------->MYB52(2)                  --------->At4g35610        --------->At4g35610                          --------->MYB46(2)                  <---------At4g35610        <---------ZAT2                      --------->MYB55(2)                      <---------HSFB2a(1)     <---------ZAT14                      <------MYB46(1)                         --------->HSFB2a(1)     <---------At4g35610                      <------MYB83                            --------->HSFC1(2)      --------->At4g35610                      <---------MYB46(3)                      <---------HSFC1(2)      --------->ZAT2                      --------->MYB52(2)                      <---------ZAT2------>NtERF2--------->ZAT2                      <---------DEAR3(2)              --------->ZAT2  <-------GAMYB   --------->ZAT14                     <---------TOE1(2)        <---------At4g35610    <-----------RAV1(1) ------>NtERF2 -----DOF2           <---------TOE2(2)        --------->At4g35610    ====================RAV------>NtERF2 -ARR11(3)          <---------MYB52(1)  <---------At4g35610   <------NtERF2<---------ANAC46--------->DEAR3(1)   ttgttttttgagtctatgcttcgttggttcggtactgaattgagcttcttctgaacagcttggcagcttctctgttgccgtctggctctgcagccgccgt  23627100                    <---------At4g35610                  <--------P                 <-------GAMYB                 <---------MYB52(1)                                                             <----       ------>NtERF2--------->At4g35610                                                         <---- ----MYB83      <---------DEAR3(2)                                                          <-------- ----MYB46(1)  <<<<<<<<<<DREB2A                                                             <-------- ------TOE2(2) <<<<<<<<<<DREB1A                                                             <-------- ---ANAC46     <---------DREB2C(2)                                                     --------->At4g35610 -->DEAR3(1)   <<<<<<<<<<AtTINY2                                                       <---------At4g35610 ->RAP2.3(1)   <---------At1g77200                                                --------->TGA1a ------TOE1(2) <<<<<<<<<<DREB1B                           <---------At4g35610     =================== -----MYB52(1) <<<<<<<<<<DREB1C                           --------->At4g35610     <---------TGA1a ----SPL7     --------->DDF1              <-----------HVH21        --------------------->WRI1   <----   aggttttgggggctatgtcggtagctctagattccaaacttctctgtcaaacgaagactctgcttccttcttggtatgtttctcccgtctgcttacttgt  23627200                                                                                           ----------                                                                                          --------->REM1(1)                                                                                        ------>ZmHOX2a(1)                                                                                      ------>ZmHOX2a(2)                                                                                     <------ZmHOX2a(2)                                                                                    --------->ARR14(2)                                                                                    --------->ARR11(3)                                                                                    <---------ARR11(3)                                                                                    <---------ARR14(2)                                                                                   <------ZmHOX2a(1)      --------->WOX13(1)                                                          --------->HSFB2a(1) -----ANAC46                        <---------ARR14(2)                            --------->HSFC1(2) -----ANAC58                       <------ZmHOX2a(1)       <---------ALFIN1       <---------HSFB2a(1) -ANAC46                    <---------ANAC46             <---------ALFIN1         <---------HSFC1(2) -ANAC58              <---------AHL20(2)         <---------bZIP60(2)         --------->ANAC58 -ANAC58             <---------AHL20(2)         <---------TOE2(3)            --------->ANAC46   <---- ===========================bZIP_DOF--------->ARR14(2)   ----------->RAV1(1) --------->ANAC58 ------- -----ANAC58     <----------DOF2 <---------TOE1(2) <--------P           <----------DOF2--------->TOE1(2)   gtgtttgccaatctctcatcttttttaatggattgtaggatttggatagtgaggttgcccaacacttgcaaaggctttcaaggaaggatcctacaacaaa  23627300      <----------DOF2                                                                             ---     <---------ANAC58                                                                    <---------ANAC58     <---------ANAC58                                                                    <---------ANAC58 ->RAV1(1)            <---------ATHB12          <---------YAB1      <----------DOF2<---------ARR11(3) -----TOE2(3)   <-----------GT1            --------->ATHB12    <-----------GT1     --------->ARR11(3) --->DOF2  <---------YAB1                 <---------YAB1 --------->MYB52(2)    ---------->DOF2  <----   ggtaatggcttctctgattatccaatcgactacaagagctgttcttgattgtgatttgtttgtttcaacccttttacagattaaagctcttgcttcccta  23627400  Previous    Next  AGI:  At5g58410.1    Description:  binding / protein binding / zinc ion binding. similar to hypothetical protein OsI_005292 [Oryza sativa (indica cultivar-group)] (GB:EAY77445.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21352.1); similar to hypothetical protein OsJ_004856 [Oryza sativa (japonica cultivar-group)] (GB:EAZ15031.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 23626889    to: 23634612    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version