Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            --------->YAB1                                                                         <---------ATHB12                                                                       --------->WOX13(1)                                                                     <---------YAB1                                                                    --------->TOE2(3)                                                                   <---------ICU4                                                                   --------->YAB1                                                <------ZmHOX2a(2) <---------ATHB12                 --------->WOX13(1) --------->AHL20(2)            --------->ICU4                   --       <---------ATHB12             --------->YAB1              --------->WOX13(1)        <---------GLK1(2)     --------->WOX13(1)           --------------------->WRI1 --------->ANAC58        --------->ANAC58    --------->MYB46(3) <-----------ARR10   ------->TEIL      --------->ANAC46        --------->ANAC46 --------->MYB46(3)<------ZmHOX2a(2)<---------AHL20(2)       --------->ANAC58        --------->ANAC58   ccaacaacaatcagtgtatcgatcaaatctaaactcaattatatgtatcgatcacgagtcaaaacgcaatcatcaatcaaaacacacacacaaattctca  23616100                                ----------->GT1                               <---------TOE2(3)                               <---------TOE1(3)                                                   --                              <-----------RAV1(2)                                         <---------ARR14(2)                         <---------ATHB12                                                 --------->ARR14(2)                         <------ZmHOX2a(2)            <---------At5g28300         --------->DAG2  <--            ---------->DOF2--------->WOX13(1)  --------->ANAC46 --------->TOE2(3)---------->DOF2-----    ---------->DOF2<---------ARR14(2)  --------->AHL20(2)  <----------DOF2   <----------ID1 ------>ZmHOX2a(2) ------->MYB46(3)  --------->ARR14(2)  <---------AHL20(2)--------->LBD16 ---------->DOF2----------->ARR10   aaccactaaagccctaaaccagaaccgatcattcaggttatataattctcccccattaccgcattacctctatattaaagagaaaaagcatagatcggca  23616200                                                                                               ------                                                                                             <-------                                                                                          <---------GLK1(2)                                                                                          <---------ARR14(2)                                                                                          --------->ARR14(2)                                                                                   ---------->DOF2                                                                                  <------ZmHOX2a(1)                                                                                  ===================                                                                                  ===================                                                                              --------->ALFIN1-------       --------->TOE2(3)                                                     <-----------HVH21<------       --------->TOE1(3)                                                  <---------LBD16============ ------->YAB1                                                            --------->MYB52(1)--------->GLK1(2) -------ATHB12       <---------ANAC55(2)                               --------->MYB46(3)============ ---->WOX13(1)       --------->ANAC55(2)----------->GT1              --------->WOX13(1)  <------ZmHOX2a(1)   atcagagaaccctaaatttcaacatgtaatcaacaattcgcaaggagaaaacaaaacatatatgatcaagacaatcaccggtgaggaaagaggattctgg  23616300                                 ------>ZmHOX2a(2)                                <<<<<<<<<GATA-4                           --------->REM1(2)                        <---------ANAC58            ------>ZmHOX2a(2)   <<<<<<<<<GATA-3           <------ZmHOX2a(2)    <---------GLK1(1)           --------->CCA1(2)    <------ZmHOX2a(2)          <---------ARR11(3)    <<<<<<<<<GATA-1          --------->ARR14(2)    <<<<<<<<<GATA-2          <---------ARR14(2)   <---------ARR14(2)          --------->AGP1<---------ANAC55(2)       --------->LBD16  <---------ANAC58   <---------ARR14(2)   <---------ANAC46    <-----------------AGL1   --------->ARR14(2)   <---------ANAC55(1)------>NtERF2   ------->TEIL         --------->O2     --------->MYB46(3) --->LBD16--------->ARR11(3)   <---------AGP1 --LBD16 --------->GLK1(1)--------->ALFIN1--------->ANAC46 =================HOX2a_HOX2a  <---------ARR11(3) ==================HOX2a_HOX2a --------->ARR14(2)       <------NtERF2 -->HSFB2a(2)           <---------O2   --------->ARR14(2)                 <----------DOF2 ---HSFB2a(2)      ---------->DOF2     <---------ARR14(2)              <-----------GT1   ------>MYB46(1) =================HOX2a_HOX2a  --------->ARR11(3) ---------->DOF2  ------>ZmHOX2a(1)     ------>MYB83 ==================HOX2a_HOX2a<---------CCA1(2)  ---------->DOF2  --------->TOE2(3)     ----------->RAV1(1)   gaatgaatccgagatctagtagaaagacgtgtagatctctctatccgcccctaaaggccccttctcttccttatttctttctgggtttaccaacaaaaat  23616400                                                                --------->ANAC46                                                              <---------ALFIN1                                                             <---------WRKY38(1)                                                             <---------WRKY12                                                            --------->PCF5                                                          <---------MYB46(3)                                                          <---------DEAR3(2)               <---------AHL20(2)                                                         <---------ANAC58              <---------AHL20(2)                                                         <---------RAP2.6(2)           --------->AHL20(2)                                                         <---------ANAC58     --------->YAB1 <-------                                                   --------->ATHB12 *TSS   --------->YAB1  <---------YAB1                       >>>>>>>>>TBF1             <-----------HVH21 ------->TEIL--------->AHL20(2)                 >>>>>>>>>TBF1                   <-----------TGA1 <---------ALFIN1  --------->AHL20(2)              >>>>>>>>>TBF1                     --------->ANAC58--------->ANAC58   <---------AHL20(2)        --------->ANAC58                        --------->ANAC58--------->ANAC58   --------->AHL20(2)        --------->ANAC58      --------->CCA1(2) --------->ANAC46--------->AtLEC2 --------->YAB1 <------ZmHOX2a(1)  >>>>>>>>>TBF1        ----------->GT1 <---------DREB2C(2) --------->AHL20(2)  <---   ggaggagaagacggaagaagaagaagaagaagagatgaaaacgaagttaaacgtcattggcggtccacgcacatcaaaaataaaaataattttttaattg  23616500                                                                                                <----                                                                                                -----                                                                                               <-----              <---------ZAT18                                                                 <------            --------->ANAC46                  <---------YAB1                               ------->GAMYB       --------->At4g35610                --------->TOE2(3)                                ----------    ---------->DOF2                   --------->ETT(2)        ---------->ID1              --------->MYB46(3)  --------->At4g35610             ------>ZmHOX2a(1)   <-----------GT1                    <---------At4g35610  <---------At4g35610    ------>ZmHOX2a(1)<---------DAG2--------->ZAT6             <----------DOF2 -----CBF --------->At4g35610    <---------ANAC58 <----------DOF2               <-----------GT1------ ------TOE2(3)--------->ZAT18    <---------ANAC58 <---------DAG2 ------>ZmHOX2a(1) <---------DAG2   aggcagaagagcagaggccacttgttcctctgtgtccttgtctaccttatgactttttacacttgtcctctcattcgcctattcacttttcatccgacgg  23616600                                                         <---------CCA1(1)                                                         <---------RVE1(1)                                                        <---------ARR11(3)                         --------->YAB1                 --------->ARR11(3) -----At4g35610         <---------YAB1                 --------->YAB1 ---->At4g35610     <---------AHL20(2)             <---------AHL20(2) ----DEAR3(2)     <---------AHL20(2)              <---------AHL20(2) <---------------AGL15 ---DEAR3(1)    <---------AHL20(2)         <---------AHL20(2)<---------AHL20(2) ->HVH21       <---------AHL20(1)<---------At4g35610 <---------TOE2(3) >NtERF2    --------->YAB1       --------->At4g35610--------->YAB1   --------------->AGL15    -------   ctcacattttgccatcatatatttttatgatagtttgctcaccatttttttttttaatgatattttatctactaatatttgaaaaatcgtagcatagagt  23616700                                                     ---------->DOF2                                                  --------->At4g35610       <---------ATHB12   <---------AHL20(2)   <---------ATHB12            ------------------------>ANAC81 <-----------GT1         --------->AHL20(2)  --------->WOX13(1) ------------------------>ANAC81------ ---->GT1     --------->ANAC46           <----------DOF2        ----------->GT1  --------->AHL20(2)   ttataacaaatcatctactcaactaaatttaaaagttttatttctttcaatcagccaaagtaagaagagaaaaaaaaaaaaaaaaaaataagaagagaat  23616800                                                                                      ----------->HVH21                                                <---------YAB1                  <-----------GT1                                           <---------ANAC58                    <-----------GT1          --------->YAB1                   <---------ANAC46                ------->TEIL         --------->AHL20(2)                <---------ANAC55(2)         <---------ARR11(3)         <---------AHL20(2)                --------->ANAC55(2)     --------->YAB1     --------->WRKY12    --------->At5g28300                    <---------ANAC55(1) <---------AHL20(2)   --------->At4g35610   ----------->GT1                         <---------ANAC58 XXXXXXXXXXXXXXXXXXXX>MIR857 --->GLK1(2)<---------YAB1            <----------DOF2      --------->AHL20(2) <---------AHL20(2)   atagacagtaatttataatggaaaactgcatagtcacaaacttttacgtgtttattgttttttatataatgaagatgtattttaacagttgacgaagaag  23616900                                                                                           ----------                                                                                           ------>NtERF2                                                                                          -----------                                                                                          <---------ETT(1)                                   --------->ATHB12                                     <---------ATERF1(1)                                  --------->ICU4                                      --------->ATERF1(1)                                  <---------YAB1                                 <---------MYB52(1)                             ----------->GT1       <---------ANAC58             <-------GAMYB       <-------MYC3 ----------->HVH21              <---------ANAC58        --------->WOX13(1)       ------->MYC3 --------->WRKY12     --------->At4g35610            --------->GLK1(2) --------->ANAC46     ------->TEIL --------->At4g35610    <---------At4g35610     ---------->DOF2<---------At4g35610   gggaatgcacatgaaaaaacagttgacgaagaggtgattattgagctcaatgggcttgggataatataaaagagaatcattcagttgggcctccgacagt  23617000  Previous    Next  AGI:  At5g58380.1    Description:  CIPK10 (CBL-INTERACTING PROTEIN KINASE 10); kinase. similar to CIPK2 (CBL-INTERACTING PROTEIN KINASE 2), kinase [Arabidopsis thaliana] (TAIR:AT5G07070.1); similar to CBL-interacting protein kinase 2 [Populus trichocarpa] (GB:ABJ91210.1); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 23614188    to: 23616468    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g58390.1    Description:  peroxidase, putative. Identical to Peroxidase 67 precursor (PER67) [Arabidopsis Thaliana] (GB:Q9LVL2); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT5G58400.1); similar to peroxidase precursor [Quercus suber] (GB:AAR31108.1); contains InterPro domain Plant peroxidase; (InterPro:IPR000823); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016) Range:  from: 23616793    to: 23618551    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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