Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <---------ARR14(2)                               --------->ARR14(2)                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                         --------->ANAC46                         --------->ANAC58               --------->AHL20(2)       <---------YAB1               --------->AHL20(1)     <---------ICU4               <---------AHL20(2)    --------->ICU4            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                     <---------ANAC58        -------         XXXXXXXXXXXXXXXXXXXX>MIR417 <---------YAB1      --------->ZAT6                       ------- ---->RAV1(2) <---------AHL20(2)  <---------YAB1 <----------DOF2      <---------ANAC58        ------- -->At4g35610 --------->AHL20(2)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                       ------- -ALFIN1----------->GT1  --------->ANAC58   <-----------GT1           <---------ANAC46        -------   gagttttgaaaggtaaataatttgttcaaggcagttctgattattgttactctttgtttacactaattagtttcgtcttcaattctcaaaactctcacga  23609900                                                                                                    x                                                                     --------->At4g35610       ------                                                 <---------------AGL15                        -------                                                 --------------->AGL15                       <xxxxxxx                                                 <----------DOF2     <---------At4g35610   <xxxxxxxxx                                                --------->TOE2(3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                              <-----------GT1    <------ZmHOX2a(1)       ----------->GT1                                          <----------DOF2    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)-----                                      --------->YAB1         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  - -->O2                             --------->WOX13(1)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)----- -->ANAC58                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)            xxxxxxxxxxxxxxxxxx -->ANAC58                        <-------TEIL---------->ID1 --------->TOE1(2) xxxxxxxxxxxxxxxxxxxxxx -->ANAC46                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) <xxxxxxxxxxxxxxxxsmallRNA(i) - -->TGA1a      <---------YAB1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<---------GLK1(1)  xxxxxxxxxxxxxxx   ctcttaacaaatagattataaatgagtttcttaacatccatcatctttttcctttatattgaaactaggatagctgcaattgaaacagaaattgaaaaaa  23610000                           xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                          --------->ALFIN1                        xxxxxxxxxxxxxxxx>smallRNA(i)               xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)               xxxxxxxxxxxxxxxx>smallRNA(i)               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)              <---------ZAT2----------->TGA1              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)              xxxxxxxxxxxxxxxx>smallRNA(i)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             --------->ANAC58             ------>MYB83 xxxxxxxxxxxxxxxx>smallRNA(i)             ------>MYB46(1)----------->HVH21             --------->ANAC58           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)           xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)           <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)          <xxxxxxxxxxxxxxxxsmallRNA(i)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)         <xxxxxxxxxxxxxxxxsmallRNA(i)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)        <xxxxxxxxxxxxxxxxsmallRNA(i)        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)        <xxxxxxxxxxxxxxxxsmallRNA(s)       <xxxxxxxxxxxxxxxxsmallRNA(i) --------->ANAC58      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      <xxxxxxxxxxxxxxxxsmallRNA(i)  --------->ANAC58     <xxxxxxxxxxxxxxxxsmallRNA(i)  --------->DAG2     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)     <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    xxxxxxxxxxxxxxxx>smallRNA(i)  ---------->DOF2    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   ---------->DOF2      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   --------->REM1(1) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) --->DAG2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                 --------->TOE2(3) --->DOF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   <---------ANAC58 xxxxxxxxxxxxxxxxxxxsmallRNA(le3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                      <-------- xxxxxxxxxxxxxxsmallRNA(s2)xxxxxxxxxxxxxxxx>smallRNA(i)       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ---->ANAC58<xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  <---------ANAC58                          --------->ZAT18 -------->ANAC58  <xxxxxxxxxxxxxxxxsmallRNA(i)  <---------ANAC46                   --------->ANAC46 ---->ANAC58xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) <xxxx xxxxx>smallRNA(i2)    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <-----------GT1        --------->ANAC58 x>smallRNA(i2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    <------ZmHOX2a(1)          --------->ANAC58 < -------->ANAC58  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)----------->GT1        xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxx>smallRNA(i2) xxxxxxxxxxxxxxxx>smallRNA(i)  <xxxxxxxxxxxxxxxxxxsmallRNA(fl3)   xxxxxxxxxxxxxx   gcaagcaaagacaccaagcaggtatacagtgtgacgaaaagctacaattttcttggaaggataaacctcatttgtttttgactataagcaagtggtctgt  23610100              --------->AHL20(2)              <---------AHL20(2)            --------->ICU4            <---------YAB1         <---------YAB1                                                            <---------YAB1        --------->ARR11(3)                                                <---------DAG2 --------->GLK1(2)                                                        <----------DOF2 -ANAC46<---------ARR11(3)                                             <-----------GT1 xxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                  --------->AHL20(2)    <---------AHL20(2) ---------GLK1(2)    --------->At4g35610                          <---------AHL20(2)<---------AHL20(2) xxxxxxxx>smallRNA(le3)           ------>ZmHOX2a(2)          ------>ZmHOX2a(2)    --------->AHL20(2)<   aagaatctaatatcatttttatgagttgaaatttgatctatttgaattagttttcaaatttgatctatttaaattacttttcatttttattttttgaact  23610200                                                                                              <------                                                                                              -------             --------->LBD16                                                                <-------MYC3           <---------LBD16                                                                  ------->MYC3       ------>ZmHOX2a(1)                                                            <----------ID1      --------->TOE2(3)                                                     --------->DAG2  ------->MYC2      <---------------AGL15                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     ----------------->AG                                     ------------>CBF    ---------->DOF2     ----------------->AGL1          <---------At4g35610   --------->WOX13(1)----------->GT1<-------MYC2     <-----------------AGL1    <-------TEIL              ------------>CBF ---------->DOF2  <---------ANAC58 ---------ICU4              <---------MYB46(3)    <------------CBF      <---------YAB1     <---------ANAC58   aaaaatttcctaaaccggaataagtgtttgtggttcgtctgctattacaaaagattgaagccaatccaatacatatgaaaggtgaaaagacaaacgtgcc  23610300                                     <---------AHL20(2)                            <------NtERF2                           <---------ATERF1(1)                           --------->ABI4(1)                          <---------ATERF1(2)                          --------->DEAR3(1)                          --------->RAP2.3(2)                          --------->RAP2.3(3)                          --------->ANAC46                         --------->ORA47(2)                         --------->RAP2.3(1)                         --------->DEAR4(2)                                    <---------ANAC46                         --------->ATERF1(1)                                   <------MYB46(1)                        <---------ATERF1(1)                               <-----------RAV1(1)       <        --------->MYB46(3)--------->RAP2.6(2)    --------->ANAC55(2)<---------At4g35610             - ------>ZmHOX2a(1)     --------->ANAC46    *TSS<-----------GT1      --------->At4g35610            -- ---ZAT18  --------->ANAC46------>NtERF2   <----------DOF2        <---------ZAT18                  -- -->ZAT18<---------ALFIN1--------->ERF1 <-----------GT1  <-----------RAV1(1)   <------MYB83     <----   ctcctcttcatccaccctaattctctcgccgcctctcatttttttcttttcacgtttttttgttgttgtgagcttcttgttgggtttaagactgttttcg  23610400                                                                                            <--------                                                                                      <---------AHL20(2)                                                                                     --------->AHL20(1)                                                                                     <---------AHL20(1)                                                                                     <---------AHL20(2)                                                   <---------TOE2(3)                 --------->AHL20(2)    <---------MYB52(2)                 <---------HSFC1(2)                <---------ANAC58 <---------ANAC58 ---------At4g35610                    --------->HSFC1(2)        --------->ANAC46 ------>MYB46(1) -------->At4g35610                    <---------ZAT2       <---------DAG2        ------>MYB83     -- ------->ANAC58                        --------->HSFB2a(1)  <----------DOF2     ------->GAMYB      -- ------->ANAC58--------->GLK1(1)       --------->ZAT2    <-----------GT1 <---------ANAC58 <---------ANAC58 -------TGA1--------->LBD16    <---------ATHB12  ---------->DOF2---------->ID1  <---------MYB59    --   tcagcaactaaaccctggtatccatttcttccaattatccaagcttcccctcaaaggtttcactttttcgccattgcttcaaccaaatttattcgtgtta  23610500                        <----------DOF2                   <---------ANAC46                   ----------->GT1                  --------->ALFIN1              <---------ANAC46             <---------MYB52(1)                                                   <---------ARR11(3)            <-------GAMYB      --------->MYB111(2)                                --------->ARR11(3) -ZAT6     <-----------RAV1(1) --------->MYB111(1)                             <---------GLK1(2) ------->ANAC58 <---------ANAC58     <---------ZAT6                      <---------YAB1          <--- ------->ANAC46 <---------ANAC58<------MYB83                           --------->YAB1     <---------GLK1(2) ------->ANAC58 <---------ANAC46<------MYB46(1)<---------MYB52(1)      <---------ICU4<----------DOF2-   aacggaatcgatgctgttgtgtggtgatttaagttggtagagttctacagttgtttcttctgtttcagcacgattatcacagaatgtctttagatacttc  23610600                                                                          <-------TEIL                                                                        --------->ARR14(2)                                                                        <---------ARR14(2)                                                                        --------->ARR11(3)                                                                        <---------ARR11(3)      <----                                                                        --------->AGP1          -----                                                          ---------->DOF2<------ZmHOX2a(2)    <------                                                      <---------------AGL15                   -------                                                      --------------->AGL15                  <-------                   --------->DAG2                     <---------YAB1  ----------->ARR10      --------              --------->ANAC58                       ================================================         <---------At4g35610             --------->At4g35610   ---------->DOF2             --------->YAB1         --------->At4g35610 <----------DOF2         <-----------------AGL1               --------->ICU4 -------DOF2  --------->ANAC58           <---------At4g35610<---------TOE2(3)         ------->GAMYB-- -------->MYB59  ---------->DOF2--------->YAB1       <-----------------AGL3          --------->ANAC46   tttaggtcttaagctcaagaaaaggctgaagctttcatcgtttagctccaattcttcttataaaggaaagagtagatccattactcaacgcagtgatgat  23610700                                                          <---------TOE2(3)                                                        <---------ATHB12     --------->ZAT6                                 <---------------AGL15 -----bZIP60(1)                                    ----------------->AG ---->bZIP60(1)          <---------ANAC58          <-----------------AGL1 ---ICU4                 <---------ANAC46          ================================================== -->YAB1              --------->ARR14(2)           <-----------------AG <-----------GT1         <---- --YAB1               <---------ARR14(2)          --------->ANAC46      --------->YAB1       -------- ->ICU4 <---------LBD16  <---------ANAC58    <-----------ARR10       --------->YAB1          -------- ===================================================================MADS_MADS         <---------GLK1(1) ------->ZAT6      <---------TOE2(3)>>>>>>>>>TBF1-------->P       --------->YAB1      --------->GLK1(1)   gacactaactctcggaagactacggtttcgtctatgaagaagaagagggtctaccccaataaggctaagcataataaccatgtgaatgaaatccctcgca  23610800  Previous    Next  AGI:  At5g58370.1    Description:  GTP binding. similar to GTP binding [Arabidopsis thaliana] (TAIR:AT5G11480.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21326.1); contains InterPro domain GTP-binding; (InterPro:IPR005289); contains InterPro domain GTP-binding protein, HSR1-related; (InterPro:IPR002917) Range:  from: 23610343    to: 23613171    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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