Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                --------->At4g35610                          <---------ALFIN1                         --------->ZAT14                                           ------>ZmHOX2a(2)                     --------->ANAC46                                            --------->ARR11(3)         --------->ARR11(3)   <---------ZAT14                              --------->ALFIN1      <---         <---------ARR11(3)   --------->ZAT14                              <-----------RAV1(1)  <----        --------->YAB1   <---------ZAT14                       <---------ICU4    <---------ARR11(3)     --------->YAB1  --------->ANAC58                          --------->YAB1    <---------AGP1<----- ------->YAB1       --------->ZAT18                            <--------ATHB1    --------->ARR14(2) --->RAV1(1)    <------ZmHOX2a(1)      <-------TEIL           <---------ATHB12   <---------ARR14(2) --ID1 <---------YAB1--------->ANAC58--------->YAB1           <---------ATHB51  <---------CCA1(2)<---   aaaatagtgatgatattaggagcacgctgcactgctcaatgttcatagaaaacttcagacttcaataatgcctaaatgtgttggatcttgttttggagtt  23588700                                                                                                  <--                                                                                                -----                                                                                                -----                                                                                                -----                                                                                              <------                                                    --------->YAB1                         <------MYB83                                               <---------ATHB12                            ----------                                          --------->LBD16                                  <------MYB46(1)                                         --------->ANAC58                                <--------P  <---------WOX13(1)                     --------->ANAC58                              --------->MYB55(2) ---MYB46(1)              <---------YAB1 --------->ANAC46                              --------->ATHB12 -----MYB46(3)          <-----------GT1 <---------LBD16                                <---------MYB46(3) ---P                <---------ICU4   <---------ARR14(2)                              --------->ALFIN1 ---MYB83     ----------->HVH21       --------->ARR14(2)       <---------ATHB12       <---------AtMYB61   ggtgatagatgatgaaatgaccagtattactattacatagtatccgcaaatcaagaatgatgcaaatcaagagaaaacagtagcaagagtggttggacag  23588800                            <----------DOF2                      <---------ICU4                      -------->HAHB4                      --------->YAB1                      --------->ATHB12                     --------->ICU4                     <---------ATHB12 ------P        >>>>>>>>>RAP2.2 ---->ANAC58  <---------ARR11(3) ---->ANAC58  --------->ARR14(2)                                                   <-----------GT1 ------>GT1   <---------ARR11(1)     <-----------GT1                         ---------->ID1         - -----RAV1(2)<---------CCA1(2)    --------->YAB1        ----------------------->TaNAC69(2)        --- ->HVH21<-----------GT1     --------->TOE2(3)   <------ZmHOX2a(2)       ------->TEIL             <---   gtaagaactattaccatatctaaatgattactttaaaaataacaacttggatcaagatggtttttgttttcatgtatttgtcattttgctatctcataag  23588900                                              <---------ANAC46                                             <---------LBD16                                          <-------GAMYB                                         <-----------RAV1(1)                                         --------->MYB52(2)                                         <---------MYB46(3)         <------MYB83                    --------->MYB55(2)       --------->ATHB12         <------MYB46(1)               <---------MYB52(1)--------->ANAC46 -------->YAB1                       <---------ANAC58    --------->ANAC58   ---------->DOF2       <-- ------>GLK1(2)                 --------->TOE2(3)<---------ANAC46<---------YAB1      <----------DOF2 ------GLK1(2)    <---------LBD16    <---------ANAC58    --------->ANAC58 ------>ZmHOX2a(2)       <--   aatcttaagcttggtcagtctctgggtctctctacattagcgtttgttgcggtgtttacacaccaatatgatttgatctaaagactccttttgaagactg  23589000                                                                                 <<<<<<<<<TBF1                                                                              <<<<<<<<<TBF1                                                                           <<<<<<<<<TBF1     <<<<<<<<                                                                        <<<<<<<<<TBF1     <<<<<<<<<TBF1                                                                     <<<<<<<<<TBF1  <<<<<<<<<TBF1               --------->ANAC46                                   <<<<<<<<<TBF1<xxxxxxxxxxxxxxxxxxxxx            <---------ARR14(2)         <---------ALFIN1         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)            --------->ARR14(2)        --------->ZAT14          <<<<<<<<<TBF1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       --------->MYB52(1)             <---------ZAT14        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    --------->TOE2(3)                 <---------ZAT18       <<<<<<<<<TBF1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    --------->TOE1(3)        <-----------GT1              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    --------->ANAC46 <----------DOF2 <---------ALFIN1    <<<<<<<<<TBF1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) -------ANAC58 --------->ANAC58     --------->ANAC46   <------------------------ANAC81 <<<<<<<<<TBF1 -------ANAC58 --------->ANAC58   <-----------GT1   <----------DOF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   tcttacccttaacgaatacgcctcttttgtttaacttcaccacactctctctctctttcttcttcttcttcttcttcttcttcttcttcttcttcttctt  23589100                                                                                       --------->ZAT18                                                                                       <---------ZAT14                                                                                       --------->ZAT14                                                                                      --------->ALFIN1                                                                                  <---------ZAT14                                                                                  --------->ZAT14                                                                      <------NtERF2 <---------ANAC46               <-------TEIL                                           --------->At4g35610          ----------->RAV1(1)                                         <---------At4g35610       --------->PCF2          <------------------------ANAC81      <---------ZAT18 <---------ANAC58     *TSS <---------ALFIN1     <----------DOF2       <---------YAB1 --------->ZAT18 <---------ANAC58 <TBF1 <---------ZAT18 <----------DOF2     <-----------GT1 <---------ZAT6    <---------ZAT14 xxsmallRNA(se3)      <---------DAG2    <----------DOF2<---------GLK1(2)     --------->ZAT14       <-   ctccactagtccccacatacattgccttttcttctttcttctctttcaccatttcaagattgtgttatagtccgctcaatgcagtagagtgcagaggtct  23589200                                                   --------->ANAC46                                                  --------->ZAT18                                                --------->PCF2                                                <---------ZAT18                                   <--                                             <---------ANAC58                             --------->LBD16                     <<<<<<<<<TBF1         <---------ZAT14                  -------->P    <---------TOE1(2)       --------->At4g35610             <---------ARR11(3)                <---------ANAC58 <---------TOE2(2)       <---------At4g35610 ------>ZmHOX2a(1) <---------ANAC58            <---------ANAC58<-----------RAV1(2) --------->ZAT18 --------->ARR11(3)    --------->ARR11(3)               --------->At4g35610      <--- --------ZAT18   <---------ARR11(3)  ----------->ARR10                  <---------At4g35610 <--------   gagcgctccatctgcataagttcttcttcctctattgctgagttcttcagtgcccacaattttcttacttcgctagcttacctctctactcccaggttct  23589300                                            <----------DOF2                                         <-----------GT1                     <------------------------ANAC81 --------DOF2  <----------DOF2       <----------DOF2 ---------------------ANAC81      ---------->ID1                                <---------YAB1 -GLK1(2) <<<<<<<<<TBF1          <-----------GT1                              --------->YAB1        <   ctttctctcttcttcttctttttggtttttgtatttttccttttaactttctgtaattgtctgtctctcattgttgggaattatacttaaaaatcgccat  23589400                                                      ----------->GT1                                                   <---------O2                                                   --------->O2                                                   <---------ANAC46                  <------ZmHOX2a(1)                --------->bZIP60(1)               <--------P                          --------->ANAC55(2)             <------MYB83                          <---------ANAC55(2)             <------MYB46(1)                       <---------bZIP60(1)            <---------MYB46(3)                     <---------ANAC55(1)            --------->MYB46(2)                     <---------TGA1a            --------->MYB111(2)                    <---------bZIP60(2)            --------->MYB55(2)                     <---------ANAC58            --------->MYB59                        <---------ANAC58            --------->MYB111(1)                   ----------->STF1                      <---------ANAC46           --------->ALFIN1                     ----------->TGA1                    ------->MYC3         <------MYB83                     --------->ANAC46                          <-------MYC3         <------MYB46(1)               <-------TEIL--------->TGA1a                 --------->ANAC46         <---------ZAT2======================================bZIP_DOF            <---------ALFIN1    --------->LBD16    <----------DOF2--------->CCA1(2)                          --------->REM1(1)    ------>NtERF2<------MYB83   =============================bZIP_DOF           <---------REM1(2)  <---------LBD16<------MYB46(1)<----------DOF2 ----------->HVH21           ------>NtERF2 <---------MYB46(3) -----------GT1==============================================MYC_MYB     --------->At4g35610     ----   tttctccggctaggtgggtaggaaactttcaagactttagatacaggctagtgacgtggtatattagttccaattcgctggctacacgttgtttgttcaa  23589500                                <----------DOF2                                                    <-                               <---------ICU4         <---------ZAT18                           -----                   --------->ANAC58          ----------->HVH21                           <---------ZAT6       --------->YAB1--------->YAB1   <---------AHL20(2)      <---------WOX13(1)<----------DOF2 <---- ----->MYB46(3)    --------->ANAC58   <-----------GT1 --------->ETT(2)     <---------At4g35610  <----   caactccgataaaaatcagacactcaaaactcatctttatttacttagtgacattgtccacatgatggacagacctctgcttctttctctagtgacaata  23589600  Previous    Next  AGI:  At5g58300.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G08680.2); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G08680.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80590.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21298.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18314.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Range:  from: 23589105    to: 23592310    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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