Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <------ZmHOX2a(2)                      <---------ARR11(3)                      --------->ARR11(3)                      --------->ARR14(2)                 ------>NtERF2                --------->ATERF1(2)                --------->LBD16                                                                    --                <---------ATERF1(2)             <---------MYB46(3)                                ---               <---------ANAC58                <---------AtMYB61                                 <---              <---------LBD16                  <---------DEAR3(1)                             -------           <---------ANAC58                    --------->ALFIN1                               <------           <-------GAMYB------>ZmHOX2a(2)    <------MYB46(1)              <----------DOF2    --------           <---------ANAC58                  <------MYB83         --------->ANAC46           <-------         <---------AtMYB61                  <---------AtMYB61     ----------->HVH21          --------      <----------DOF2 <---------ARR14(2)   <--------P           <---------ALFIN1             <------- ------ARR14(2)<---------ANAC58      --------->MYB52(1)        <------NtERF2               ---------- ----->MYB52(1)<---------ANAC46 --------->HSFB2a(2)           <------NtERF2         --------->GLK1(2) ---AtLEC2<---------MYB46(3)    <---------HSFB2a(2)          --------->PCF2    ----------->GT1-------   aactgaaacttttggttgcgggcagatcgtagtactggaaaacgggaaggtggtggaacaaggcccccacgacgagctattgggaaaatcagggagatat  23584200  <---------At4g35610  <---------ZAT2                <---------GLK1(1)  --------->ZAT2                --------->GLK1(1)  --------->At4g35610          <---------ARR14(2) ------->LBD16                 --------->ARR14(2) ------>ANAC46               ----------->ARR10 ------LBD16              <---------ANAC58 -->GLK1(1)               <---------ANAC58   --------->At4g35610 ---GLK1(1)           --------->ZAT2<---------ANAC58 ->ARR11(3)           --------->At4g35610    <---------At4g35610 --ARR14(2)           <---------At4g35610<---------REM1(1)            ---------->CDC5 ->ARR14(2)        ---------->DOF2<---------YAB1                    --------->TOE2(3) --ARR11(3)       --------->MYB52(1)<---------ANAC58                --------->TOE1(2)      --------->AHL20(2) ->ARR10  --------->ANAC46<---------ANAC46  ------->TEIL          ------->TEIL             <---------AHL20(2) -->CCA1(2)  ----------->RAV1(1)--------->CCA1(2) --------->YAB1<---------ZAT18   ----------->GT1<---   gcgcagctatggacacaacaaaacagcagcgtggatatgcttgatgcagctatcaaattggaatagtgaacctcagagccaaatgtgtaaaatttatatt  23584300                                                                    <---------AHL20(2)         ------                                                                 --------->YAB1              <-------                                                                --------->ICU4             <---------AHL20(2)                                                            ----------->GT1               --------->YAB1    <---------WOX13(1)     ----------->GT1              ---------->DOF2           --------->YAB1   <------------CBF   <-----------TBP             --------->ANAC46 --------->AHL20(2) <---------AHL20(2) --------GT1       <---------At4g35610    ---------->DOF2--------->MYB52(1)     <---------WOX13(1)   tatctcattgattttctatggagcttatatagttaatagagtcccaaagaacacaaaacaaagggaataataaatagtggtgaatgatataattttaaca  23584400                                            <---------AHL20(2)                      <---------AHL20(2)                                   --------->ICU4                                   --------->AHL20(1)                        <---------YAB1      --------->AHL20(2)                      <---------AHL20(1)                      --------->MYB52(1)    --------->AHL20(1)                      --------->AHL20(2)                     --------->TOE1(2)     --------->AHL20(2)                   --------->AHL20(2)                     --------->TOE2(2)------------>CBF                         <---------YAB1 --->ZAT6     --------->ANAC58 <---------AHL20(2)             --------->ARR14(2)<---------AHL20(2) ----GT1      --------->ANAC58 --------->AHL20(2)    ---------->DOF2      ----------->GT1   cgagtttttgttgagcaagtaaacttacgataaaaaaatgatcaattttattagttaaagcccaaataggcccaactagttattaattaattaacaagaa  23584500                                                                                         <---------ZAT2                                                         --------->ZAT14            --------->ANAC58                                                         <---------ZAT14            --------->ANAC58                                                 <------ZmHOX2a(1)               --------->ZAT2                                               <---------TOE1(2)                 --------->At4g35610     <---------MYB52(1)                        <---------TOE2(2)                 <---------ZAT2    --------->LBD16                           --------->HSFB2a(2)                <---------At4g35610   <---------ANAC58                           ------>ZmHOX2a(1)       <---------ANAC46   --------->ZAT2   <---------ANAC58                           <---------HSFB2a(2)     <---------ANAC58  --------->ANAC58   <---------ANAC55(2)                     ------>ZmHOX2a(1)          <---------ANAC58  --------->ANAC58   --------->ANAC55(2)              <----------DOF2      ------------>CBF     <------ZmHOX2a(1)   gaagtccgtgatttcgaaattcaaacgaagcgccatttctttctcctcctaggaaactctgcaatggccatggcctatgaggaagctcgcaagctccgtc  23584600                                              <---------ARR14(2)                                              --------->ARR14(2)                                             <---------CCA1(2)                                            <----------DOF2                                   -------                                       <---------DOF5.7(2)                              --------->ATHB12                                       <---------At5g28300                             --------->ICU4            --------->ANAC46         --------->DOF5.7(2)     ------>ZmHOX2a(1)         <---------YAB1            --------->ANAC58       <---------ICU4 <<<<<<<<<TBF1                     <---------YAB1 <-            --------->ANAC58  ----------------------->TaNAC69(2)                  --------->YAB1  <--        --------->YAB1   <-----------GT1  --------->LBD16 ------>ZmHOX2a(1) <-----------GT1  <-------   ttcaagagaatcacaagcgatttcaagttacccttcatcgttaccgcgtttcttcttctcctccttctctgattcgtttatcaattttgattattgaatc  23584700                                                                 <---------ANAC58                    --------->GLK1(1)                            <---------ANAC55(2)               <---------LBD16                                   <---------ANAC46           <---------HSFB2a(1)                                   <---------ANAC55(1)        <------ZmHOX2a(1)                            --------->ANAC58 <------ZmHOX2a(1) <---------GLK1(2)                 --------->ANAC46                  --------->At4g35610 >TEIL<---------TOE2(3)                      ---------->DOF2     --------->ANAC55(2)   <---------At4g35610 --------TOE1(2) <---------TOE1(2)     <---------At4g35610       <---------ANAC58  <---------ARR14(2) -------LBD16<-----------GT1 --------->GLK1(2)       --------->ANAC58    <-----------GT1         ---- --GLK1(2) --------->HSFB2a(1)         --------->At4g35610<-----------RAV1(2)      --------->ARR14(2)   tcaggatttaggaatttcccagatttctaagactctgactcagattacaaagaaaacgcctcaggtttcgtgttttttccttccatttctgcttcattcc  23584800                                         --------->At4g35610                                      <---------ZAT2                                      --------->ZAT2                                      <---------At4g35610                   --------->TOE2(3)  --------->At4g35610              <----------DOF2 <---------GLK1(2)                            <---------At4g35610          ---------->ID1     --------->At4g35610                --------->DAG2   --------->At4g35610 -->ZmHOX2a(1)<---------DAG2 <---------At4g35610--------->YAB1 ---------->DOF2   <---------At4g35610   tagtccaattttgtagctttaccacaatttcagcttcttcagcagcgtaatcacaaacccatcgataaagccctcttagctactgctgaaccaagacgct  23584900               <---------MYB52(1)              --------->At5g28300             <---------ANAC55(2)             --------->ANAC55(2)             ----------->GT1           --------->SPL7         <---------SPL7        <---------ANAC58        <---------ANAC58                                                                 --------->WOX13(1)       --------------->AtSPL3                     --------->At4g35610                  <---------ATHB12       <---------------AtSPL3                     <---------ZAT2                      --------->ANAC58       --------------->AtSPL8                     --------->ZAT2                      --------->ANAC58   --------->LBD16                                <---------At4g35610    <---------ARR11(3)     -----  <---------ANAC46                   ----------->GT1<----------DOF2      --------->ARR11(3)   -------  --------------------->WRI1      --------->ICU4 <---------TOE1(2)       <---------GLK1(2) <---------ATHB12  --------->ANAC55(2)     ------>ZmHOX2a(1)  <-----------GT1     --------->HSFB2a(2) --------->WOX13(1)   cttcccgtgttcgtaccgtaatttcttcctatcgcgatgatgtaattttcccagctttctcttacttctgtaatagatttttcacagcaatcaatcaacc  23585000                                                                                           <---------ANAC58                                                                                           <---------ANAC58                                                                                         <---------ZAT18                                                                                  --------->bZIP60(1)                                                                                  --------->O2                                                             ----------->RAV1(1)  --------->ANAC58                                                        <---------ARR14(2)        <---------ANAC46                                                        --------->ARR11(3)        <---------O2<------                                                       <---------GLK1(1)          <---------bZIP60(1)                                              --------->GLK1(2)                   <---------TGA1a                                              <---------ARR14(2)                  --------->ANAC58                                              <-----------ARR10                   --------->TGA1a                       <---------ANAC46       --------->ARR14(2)                 <------NtERF2-------                    <---------DEAR3(1)        ------->TEIL------>ZmHOX2a(2)     ------>NtERF2<-------       ---------->ID1 <------NtERF2    --------->SPL7  --------->GLK1(1)       <---------DEAR3(1) -->GAMYB  <----------DOF2           <---------SPL7  <------ZmHOX2a(1)  <---------REM1(2)--------->ZAT18 ->P   <---------CCA1(2)           --------------->AtSPL3<------ZmHOX2a(2)     ----------->HVH21   caatcccttgtctcttttcaggtcgtcgtagacactggtcgtacttcgaatctgaggagatcgcgacatagctctacatgggcgacgtaagtgccctgct  23585100  Previous    Next  AGI:  At5g58270.1    Description:  STA1 (STARIK 1); ATPase, coupled to transmembrane movement of substances. similar to ATM1 (Arabidopsis thaliana ABC transported of the mitochondria 1), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT4G28630.1); similar to ATM2 (ABC TRANSPORTER OF THE MITOCHONDRION), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT4G28620.1); similar to hypothetical protein OsJ_019168 [Oryza sativa (japonica cultivar-group)] (GB:EAZ35685.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21284.1); similar to ATP-binding cassette transporter, subfamily B, member 9, group Range:  from: 23579368    to: 23584416    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g58280.1    Description:  transcriptional factor B3 family protein. similar to DNA binding [Arabidopsis thaliana] (TAIR:AT3G19184.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21292.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) Range:  from: 23584564    to: 23585896    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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