Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                ----------->HVH21                                                              --------->ANAC58                                                              --------->ANAC46                                                              --------->ANAC58                                                            --------->CCA1(2)                                                     <-----------RAV1(2)                                               ==================================HOX2a_HOX2a                                               ------>ZmHOX2a(2)                                              <------ZmHOX2a(2)           <------ZmHOX2a(1)                            <---------YAB1    ===================================HOX2a_HOX2a                   <------MYB83              <---------ARR14(2)    --------->At4g35610                   <---------ANAC46          <---------ARR11(3)    <---------At4g35610                   <------MYB46(1)           --------->AGP1--------->ARR14(2)                   ----------->GT1           --------->ARR14(2)    <-------GAMYB                  --------->MYB46(2)         --------->ARR11(3)----------->RAV1(1)            <---------MYB52(1)               <---------AGP1<---------ARR14(2)                       -   <---------YAB1 --------->MYB111(2)       <---------CCA1(2)--------->SPL7                       <-- ------->DOF2 --------->MYB52(2)     --------->ICU4  ======================RAV                   <---   aaatgctgattgtagttagtttggtgaaatctcattgtaatgtttcagatctagagcaggcgatacgacagttgaaggagacgactaagttgtcgattcc  23568900                           --------->At4g35610                           <---------At4g35610                           <---------ZAT2                ------->MYC2                ------->MYC3                ------->PIF5                <-------PIF5                <-------MYC3                <-------MYC4                <-------MYC2                ------->PIF4     <---------ANAC46    <------ZmHOX2a(1)    <---------GLK1(1)     <---------YAB1--------->YAB1       ---------->DOF2               ----------->GT1               < -------->MYB52(2)<-------TEIL     ------->GAMYB              <---------ZAT6 -------->P          ---- -------MYB52(1)<-------PIF4   ----------->HVH21 ----------->GT1    <---------ARR11(3)      --------- -------DOF2<---------ZAT18--------->ZAT2     --------->GLK1(1)     --------->ARR11(3)   ------->TEIL   tttagttgtgtttgggcacatgcataaggagctgcaacgggggaaaggaaatcggaaaatggtagtgcaagatagtgacaaccagactgtgtatgtgaac  23569000                                          <---------At4g35610                                          --------->ZAT2                                          --------->At4g35610          <---------ARR11(3)           -                                          <---------ZAT2 <---------MYB46(3)             ----------->ARR10                                       --------->At4g35610             --------->ARR11(3) <---------ARR11(3) ---------ZAT18           ---------->DOF2----------->RAV1(1) <------NtERF2         <---------MYB46(3) ------->GT1      ---------->DOF2    <------ZmHOX2a(1)  --------->ALFIN1          <---------AtMYB61-- -->HVH21     ----------->GT1  ---------->DOF2          <---------AtMYB61 <----------DOF2 --------->ARR11(3)   ggtgcaatagttccaagggttaaagaggcaaagaaaagaggagcagcagagtctgagagtggtggcacaacaagagctttcacattggtggagattttag  23569100           --------->AHL20(2)  <-------TEIL                      <------ZmHOX2a(1)         --------->ANAC58   <---------ANAC58                    ----------->GT1         --------->ANAC58   <---------ANAC58            >>>>>>>>>ARR1                     -----------         ----------->GT1   <---------------AtSPL8       >>>>>>>>>ARR2                <---------REM1(1) ---------->GT1         >>>>>>>>>CBP60g               <---------YAB1                <-----------ARR10 --------->GT1          >>>>>>>>>SARD1                <---------TOE2(3)  <----------DOF2<-----------GT1   atgggaaaatcaagaaaatagcagaaatttgggtacatgtaaatggaagtatggctaagattgtggaggaaaatactttgtttgaagatgtaacctgatt  23569200                                                                                             <-------                                                                                         <---------AHL20(2)                  <---------HSFB2a(2)                                                    <---------AHL20(1)                 <---------LBD16         --------->YAB1                                  --------->AHL20(2)                <---------LBD16          --------->AHL20(2)                              --------->AHL20(1)            <---------AHL20(2)    <-----------GT1                          ---------->DOF2   --------    --------->AHL20(2)           --------->ICU4                         <---------HSFB2a(2) <--------    <---------AHL20(2)      ----------->GT1         <---------ANAC58    --------->HSFB2a(2) --------- >RAV1(2)   --------->AHL20(2) --------->YAB1       <---------ANAC58 <----------DOF2    --------->AHL20(2)   tgaaatttaaacaattaattcgggacaagactgtaataactaattatacatttgtcttggcgaacaagtcccttttagaaagcatagctattaaattaat  23569300                                                               <---------ANAC58                                                               --------->DEAR3(1)                                                               <---------ANAC46                                                               <---------ANAC58                                                              --------->ATERF1(1)                                                              <------NtERF2                                                             <---------ATERF1(1)                                                             <---------RAP2.3(1)                                                             ------>NtERF2                                                            <---------DEAR3(1)                                                            --------->DEAR3(1)                                                           --------->ATERF1(1)                          ----------->GT1                  --------->RAP2.3(1)                         --------->MYB59                   <------NtERF2                      *TSS<------MYB83                    <---------DEAR4(2)                     --------->ATHB12                     <---------ATERF1(1)                     --------->ATHB51                     <---------RAP2.3(1)                     --------->AHL20(2)                   <---------ORA47(2)                     <---------AHL20(2)                   <---------DEAR3(2)                    <---------AHL20(2)                   <---------DEAR3(1)               --------->ANAC58                          <---------DEAR4(1)         --------->AHL20(2)                              <---------MYB46(3)         <---------AHL20(2)                              <---------RAP2.3(3)        <---------AHL20(2)<------MYB46(1)                <---------DREB2C(2)  ----------->GT1   --------->ICU4                      --------->SPL7--------->HSFB2a(2) --AHL20(2)    --------->ANAC46                         <---------ORA47(1) ->AHL20(2)    --------->ANAC55(2)                     <---------MYB52(1) -AHL20(2)     --------->ANAC58    --------->GLK1(2)   <-----------HVH21 >AHL20(2)   <-----------GT1  ---------->DOF2       <---------LBD16   <---------HSFB2a(2)   agtagggaaaattatttacgaaattatttggtaaaagaatttgggagaacaaactccggtcggcgccgtgttttagaaccctacttgttgttcttccttc  23569400                   <---------ANAC58                   --------->DEAR3(1)                   <---------ANAC46                   <---------ANAC58                  --------->ATERF1(1)                  <------NtERF2                 <---------ATERF1(1)                 <---------RAP2.3(1)                 ------>NtERF2                <---------DEAR3(1)                --------->DEAR3(1)               --------->RAP2.3(1)               --------->ATERF1(1)               <------NtERF2              <---------DEAR4(2)              <---------ORA47(2)              <---------DEAR3(2)              <---------RAP2.3(1)              <---------ATERF1(1)             <---------DREB2C(2)             <---------DEAR3(1)             <---------DEAR4(1)                                      ------->GAMYB             <---------MYB46(3)                                    ------>MYB46(1)             <---------RAP2.3(3)<---------CCA1(2)                  ------>MYB83            <---------ORA47(1)<---------ANAC58                    ----------->RAV1(1)            --------->SPL7  <---------ANAC58                      --------->MYB52(1)           <---------MYB52(1) <---------ANAC58                   --------->AtMYB61           <-----------HVH21<---------ANAC58                    --------->MYB46(3)        <---------LBD16   <-----------GT1                    <---------ETT(1)     <----------DOF2 -------------->OsCBT                 <-----------GT1          ----------->GT1   ttaatcgctctccggtcggcgccgtgtttttcgcgtctctctcaaactccaattctctattttccgaccaacagagagtagcgactggttattttctgta  23569500                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   <-                        <-----------RAV1(1)                                                       <--                       <---------LBD16       <---------ANAC58                     --------------->AGL15                <---------DAG2               <---------ANAC46                     <---------------AGL15                <----------DOF2              <---------ANAC58             <---------YAB1          ---            ---------->ID1           <---------TOE1(3)                    --------->ICU4      -------           <-----------GT1           <---------TOE1(2)                    <---------ANAC46    <------          <-----------GT1            <---------TOE2(3)           <---------YAB1  <-----------------AGL2   aatttctgatatttatcgctttttctctgggggttttctaaggttttacttggaatccaaatcgatgtttattgtgatgtttagctagttatggaattgt  23569600       <---------MYB46(3) --------->ALFIN1 -----MYB83                                       <---------YAB1 --------ANAC58                <---------ZAT18    --------->ICU4 --------ANAC58    <---------bZIP60(2)          --------->YAB1             <-----------GT1 --------ANAC46    <---------ANAC58            --------->ICU4  <---------At4g35610 -----MYB46(1)     <---------ANAC46        <---------ZAT18     ----------->RAV1(2) -------MYB46(3)   <---------ANAC58        --------->ZAT14     --------->ZAT2 ------>MYB55(2)  <-----------------------TaNAC69(2)           <---------ZAT2 -->ATHB12      ----------->TGA1           --------->ZAT18     --------->At4g35610               <--- -----RAV1(1)   ----------->HVH21          <---------ZAT14  <---------At4g35610      ---------->DOF2   tgggtggagttgttcgcagtgacgtagaagtagcatactctcgagtgcagtgatgattctgaagcagctgaaacaatttacctgtaacaaagctaaaccc  23569700                                                               --------->bZIP60(1)                                                               <---------bZIP60(1)                                                          --------->TOE2(3)                  --------                                                        ------>MYB46(1)                     <--------          <-----------GT1                          <-----------GT1                          --------- <-----------GT1                    <---------At4g35610 ------>MYB83             --------->At4g35610 -------DOF2  <----------DOF2       --------->At4g35610 -------->P               <---------At4g35610   tttttactcatgtttcctttcaatgtctgaaacttgtttgctgaatgtttttttttccaaccttgatgtcattttgcagtgtctgctactcgcagaaatg  23569800  Previous    Next  AGI:  At5g58200.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO22752.1) Range:  from: 23566860    to: 23569278    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g58210.1    Description:  hydroxyproline-rich glycoprotein family protein. similar to DNA binding [Arabidopsis thaliana] (TAIR:AT3G52170.1); similar to trans-sialidase, putative [Trypanosoma cruzi strain CL Brener] (GB:XP_802427.1) Range:  from: 23569322    to: 23571628    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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