Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->AHL20(1)                      <---------ARR11(3)                           ----------->GT1                 --------->AHL20(2)                           --------->AHL20(2)        <---------ANAC55(2)         --------->ARR11(3)       --------->AHL20(2)        --------->ANAC55(2)         --------->ARR14(2)       <---------AHL20(2)                    <-        <---------ANAC46            <---------ARR14(2) <---------ANAC58                          ----        <---------ANAC58          --------->ARR11(3)   <---------ANAC55(1)                  ---------        <---------ANAC58          <---------ARR11(3)   <---------ANAC46                     <--------     ----------->HVH21--------->ARR11(3)               --------->ANAC55(2)               --------->YAB1 --------->ARR11(3)  --------->AHL20(2) ------>ZmHOX2a(1) ------->TEIL    --------->ANAC58 <---------AHL20(2) <---------ARR11(3)--------->AHL20(2)  --------->ANAC46<---------ANAC55(2)--------->ANAC58 --------->AHL20(2) -->ATHB12 ------->TEIL           --------->AHL20(1)   <---------ANAC58 --------->ZAT6<---------AHL20(2)   tgagaccttgacgtatcaaaaaaatatatactaaaatatatcctccatttttcacttacgtatataaattagtaacacgaacaaatattaaaaataattt  23560800                         <---------AHL20(2)                        <---------AHL20(2)              <---------AHL20(2)             --------->AHL20(2)             <---------AHL20(2)         --------->AHL20(2)         <---------AHL20(2)        --------->AHL20(2)                                                    --------->HSFB2a(2)    <---------AHL20(2)  --------->AHL20(2)                                    <---------HSFB2a(2)    --------->AHL20(2)  <---------AHL20(1)                                   <---------LBD16   --------->YAB1  --------->AHL20(2)               ---------->DOF2      <---------ARR11(3) --------MYB52(1)  <---------AHL20(2)       ----------->HVH21            --------->ARR11(3) ------->GT1 --------->AHL20(1)            <---------MYB59   <---------MYB52(1) >AHL20(2)   <---------AHL20(1) <-----------GT1   ----------->HVH21  ---------->DOF2 -ICU4--------->YAB1<---------AHL20(2)    ----------------->AGL1<-----------------AGL1  --------->MYB46(3)   cgttatattaataaataaaattttaatttttttttttctatatggcctaaccctgaaaggtcccttaactaaaaaggtctctggaattcaacaacgattc  23560900                                                <---------ANAC58        <---------ALFIN1                                           --------->At4g35610       ----------->HVH21                                           <---------At4g35610      <-----------HVH21                                  ------>ZmHOX2a(2)                 --------->At5g28300                                <---------ARR14(2)                 --------->LBD16            ------->TEIL        --------->ARR11(3)                --------->LBD16      <---------ANAC58     ====================================HOX2a_HOX2a          ------>NtERF2            <---------ANAC58     ------>ZmHOX2a(1)        --------->ETT(2)  <---------ANAC58 <---------LBD16<---------CCA1(2) <--   aactctcctctctgcatctatacatcgtattgtcgatctcgtctcatctgtcttgtctactctctgccccggtaacacctctctatcttgcttcttctct  23561000                                      <---------ALFIN1                                 <---------HSFB2a(2)                               --------->At4g35610                           --------->ARR11(3)                           <-----------ARR10                           --------->ARR14(2)                           <---------ARR14(2)                          <---------CCA1(2)<----------DOF2  <---------At4g35610 <-----------GT1 --------->ZAT6                                             ---- --------DOF2      --------->YAB1--------->HSFB2a(2)                       ---------->DOF2<----------   ctttagcttcttctctgtctcttataacatatctgctcgaacactctttatctcgtctactctctccttgttgtttcaaaagctatgttttttttcgagt  23561100                ----------->GT1         >>>>>>>>>ARR1                          <----------DOF2      <---------At4g35610         <------------CBF                       ----------------------->TaNAC69(2)         >>>>>>>>>ARR2                   <------------AtMYB77--------->ANAC55(2)        --------->ATHB12                ------>MYB46(1)     <---------TOE2(3)                       < ----->GLK1(2)  --------->YAB1          ------>MYB83---------->ID1 <-----------GT1                 -- -GT1  <---------YAB1                 --------->MYB46(3)   <-----------GT1 ----------->GT1    -------   ttctgtcttatgattgtatagtaacaaaattagtctctcaccaactgtgactttgttttttttacgtttttagctcatagtaaaataaactcactggaac  23561200                                                                                   --------->ARR14(2)                                                                              --------->ANAC58                                                                              --------->ANAC58                                                                              <---------ANAC55(2)                                                                              --------->ANAC46                                                                        --------->LBD16                                                                       --------->LBD16                                                                       --------->ANAC46                                                   <---------ANAC58   <---------HSFB2a(2)         <--                                               <---------ANAC58       --------->HSFB2a(2)   ---------               <---------YAB1           <------ZmHOX2a(2)           <------ZmHOX2a(2)   <---------MYB52(1)   <---------MYB46(3)                  <---------ARR11(3)       <---------ZAT18    ------->TEIL   <-- ------------CBF--------->ATHB12       --------->ARR11(3)    <---------TGA1a --------->TOE1(2)------>ZmHOX2a(1) ------->ATHB12--------->ICU4     --------->ICU4   <---------ANAC58 =================================HOX2a_HOX2a -->ARR14(2) --------->YAB1   <-----------HVH21<---------ANAC58 --------->ZAT18    <---------ARR14(2)   ttcattggttctgtttcatgattcagaacccttgtcatgaagatcactgccttgctcgttctcaagtgcgatcccgaaacacgcgaacccgttatcctgg  23561300                                  <----------DOF2                            --------->KAN4(2)                                     <---------ZAT6       <---------ETT(1)    <---------HSFC1(2)                                     ===================    <---------ARR14(2)     <---------HSFB2a(1)                                    <-----------RAV1(1)    --------->ARR14(2)     --------->HSFB2a(1)                                  --------->SPL7   --------->DOF5.7(2)     --------->HSFC1(2)                         <---------ICU4          ------- -------WRKY12 <-----------------AGL1       <----------DOF2           --------->ATHB12  <---------HSFB2a(2) -->RAV1(2)    <-----------------AG    <-----------GT1        --------------------->WRI1--------->HSFB2a(2) -------WRKY38(1)      ----------->GT1<-----------GT1       <-------TEIL      <---------SPL7  <------   ccaacgtttccgacctctcacaattcggaaaattctctttttatcgctctaacttcgaagagttcattgtattcattgcccgtactgttgccagaagaac  23561400               <---------ARR14(2)           ------>NtERF2         --------->At4g35610         <---------At4g35610         <------NtERF2        <---------ATERF1(1)    --------->HSFB2a(1)       <---------WRKY12        --------->HSFC1(2)       <---------DEAR3(1)      <---------HSFC1(2)       <---------WRKY38(1)     <---------HSFB2a(1)       ---------->CDC5        <---------TOE1(2)     <-----------HVH21        <---------TOE2(2)                 <-----------HVH21    --------->ANAC46       --------->ANAC58                   ==========================HOX2a_HOX2a    --------->bZIP60(2)    --------->ANAC58                   ------>ZmHOX2a(2)   --------->LBD16 --------->LBD16        <----------DOF2    <---------At4g35610  <-----------RAV1(2)      --------->ANAC46                 --------->ARR14(2)         <---------AHL20(2) =============RAV  <-----------HVH21 <<<<<<<<<TBF1          <---------AGP1             <---------YAB1 -->ARR14(2)   --------->ARR14(2) <-------TEIL              <---------ARR14(2)   ------>ZmHOX2a(1)<-- ---ARR14(2)  --------->WOX13(1) --------->ARR14(2)        <---------CCA1(2)   <---------ANAC46<-----   ccctccaggtcagcgccaatccgtcaaacacgaaggttcttcttctttttttttggctcttggatctgtcatatatatgtgtcctgtttataattttgta  23561500                                                                    <------ZmHOX2a(1)                                                                  <---------TOE2(2)                                                                  <---------TOE1(2)                                                                --------------------->WRI1                                                                <---------SPL7                                    --------->ANAC58           <---------ANAC46                                    --------->ANAC58         ------>NtERF2                                 --------->ZAT18            --------->ANAC46                                 <---------ZAT14         ---------->CDC5                                 --------->ZAT14        ----------->RAV1(2)                                 <---------ZAT18        --------->At4g35610                             --------->DAG2             <---------At4g35610  --------->bZIP60(1)  ----------->GT1        --------->TOE2(3)--------->DEAR3(1) -------WOX13(1)       <---------ANAC46    =========================RAV<-------TEIL ----YAB1 --------->ALFIN1  ---------->DOF2----------->RAV1(1)<------NtERF2                  --------   attgacatcgctgtgttgatatgtagagtataaagtgcacgcttacaacataaatggcctctgcgccgtaggattcatggacgaccattatcccgttcga  23561600                                                                                  <---------MYB52(1)                                                                                 <-------GAMYB                                                                                <---------ANAC58                                                                                <---------ANAC58                                                                          <-----------GT1                                                                        <---------AHL20(2)                                 --------->GLK1(2)                   --------->AHL20(1)                       <-------TEIL                                  --------->ARR11(3)                    ----------->GT1            --------->SPL7        <---------AHL20(1)                   --------->MYB59           <---------SPL7          <---------ARR11(3)               --------->WOX13(1)<-----------ARR10                 --------->ARR11(3)             <---------------AGL15         <---------HSFB2a(2)     <---------AHL20(1)   <----------DOF2 <---------------AtSPL8  --------->HSFB2a(2)     <---------ARR11(3)  <---------DAG2 <---------ATHB12<---------ARR11(3)           ----------->GT1<----------DOF2      >>> ->SPL7     <-----------------AGL1         <---------------AtSPL3  --------->AHL20(1)            ----   agtgccttttctcttctcaatcaggtacaaaacaaaatctaacttctggtacggtcttgtttgaaggaaaatattttttctttcgttggcattctgtttt  23561700  Previous    Next  AGI:  At5g58180.1    Description:  ATYKT62. Identical to VAMP-like protein YKT62 (YKT62) [Arabidopsis Thaliana] (GB:Q9LVM9); similar to YKT61 (similar to yeast SNARE YKT6 1) [Arabidopsis thaliana] (TAIR:AT5G58060.1); similar to NTGP1 [Nicotiana tabacum] (GB:AAD00116.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Synaptobrevin; (InterPro:IPR001388); contains InterPro domain Longin; (InterPro:IPR010908) Range:  from: 23561237    to: 23562383    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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