Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <----------ARF1                            --------->HSFB2a(2)                            <---------HSFB2a(2)                          =============================RAV                                     <-----                          ----------->RAV1(2)                                               <--------                      --------->ANAC58                                                      <--------                      --------->ANAC58  --------->ANAC58                               <---------ICU4               <---------DEAR3(1)       --------->ANAC46                              <---------ATHB12        <-------TEIL---------->DOF2     --------->ANAC58      ------->MYC3       <---------ATHB12      <---------ARR14(2)  --------->At4g35610          --------->TOE2(3) ---------->ID1--------->YAB1      --------->ARR14(2) --------->GLK1(2) ----------->RAV1(1)<-------MYC3<---------ANAC46  <--------   aaattgtggattcgtcgtctgcgaaagcatctgggagagaagaagccacagtcattttcttaaacgtgttcatttttcgtctaatcaaatcatggcgcat  23541300                                                                                       ----------->GT1                                                                                      ----------->GT1                                                                                      --------->HSFB2a(2)                                                                                      <---------HSFB2a(2)                                                                                  <---------ZAT14                      <---------ZAT14                                           <---------------AtSPL8                      --------->ZAT14                                         -------->ATHB1                  <---------TOE1(2)                                           --------->ATHB51                  <---------TOE2(2)                                           <---------ICU4 ----TOE1(2)     <---------MYB52(1)      <---------AHL20(2)                   --------->ATHB12 -ANAC58       --------->YAB1           --------->AHL20(2)                   --------->ICU4 -ANAC58      <<<<<<<<<ARR1        <<<<<<<<<GATA-1                           <---------ATHB51       - -ANAC46      <<<<<<<<<ARR2       <-----------GT1        <-----------GT1  ------------>ATHB5        -   gttctgttctactacaatcgtaagtttactgggttttatctatttattgtttattcattttacattgaaacatgtctgaattattgtactggaaaaattg  23541400             <---------AHL20(1)             --------->AHL20(1)             <---------AHL20(2)                                          --------->ANAC55(2)             --------->AHL20(2)                                          --------->ANAC58       ----------->GT1                                                   --------->ANAC46     <---------ANAC46                                                    --------->ANAC58         <--     ----------->GT1                                                     --------->ANAC55(1)      ---     <---------ANAC58                                                 <---------ZAT14           <----     <---------ANAC58                                                 --------->ZAT18           <----   <---------ANAC46         <---------YAB1               --------->YAB1 ------->TEIL<------ZmHOX2a(1) ---------->HVH21        --------->ICU4    ---------->DOF2            --------->ZAT14           <---- -------->ALFIN1 <-------TEIL  ----------->GT1          --------->ICU4<---------ZAT18           <----   atgtgaggggtgtaataaattcgtttgattatgaagaaaatttgtgaaagaagagggaatgatgaacaagagtgcacgtattaagaggaaacagagttgt  23541500      <---------WRKY18(1)     ----------->HVH21     --------->WRKY12    ------>ZmHOX2a(1)   <---------ANAC58   <---------ANAC58 -------AtMYB61                                                             --------->LBD16 ------>ALFIN1                                                            <---------LBD16 -------RAV1(1)             <-------TEIL   --------->ATHB12         <---------TOE1(2) -----ANAC58          --------->DAG2      <---------YAB1        ------>ZmHOX2a(1) -----ANAC58         ---------->DOF2      --------->ICU4    --------->ARR14(2) -----ANAC46   ----------->GT1         <---------YAB1       <---------ARR14(2)              ------>NtERF2   gtggtccttgaccttgagggtgaaaaagggtccatgtgagtttgattattgatagcgatgtctatcctcccaggcttccgcatcgctcatttgcagcctc  23541600                                                                  <---------ANAC46            <----------DOF2       <---------AHL20(2)           <---------MYB52(1)       <---------WOX13(1)         --------->AHL20(2)       <---------ZAT18  <---------WOX13(1)     --------->ATHB12          --------->YAB1              <---------ZAT14 <------------CBF    <---------YAB1            --------->AHL20(2)           --------->ZAT14--------->ATHB12    --------->ICU4 --------->YAB1 --------->YAB1 --------->HSFB2a(2)     <---------AHL20(2)   <------  --------->YAB1 --------->AHL20(2)              <---------HSFB2a(2)     <---------YAB1   <---------CCA1(2)   agaaacatgattgtctttttaaaataactcaaataataatataactgggttttggaaacagtacagttgtgttttttaattggtctatctctctatcttt  23541700                                                                                 <---------AHL20(2)                                                                                <---------AHL20(1)                                                                                --------->AHL20(1)                                                                             --------->AHL20(2)                                                                             <---------AHL20(2)                                                                       <------MYB46(1)                                                                      --------->MYB46(2)                                                                      <---------MYB46(3)                                                                      --------->MYB111(1)                                                         --------->DAG2----------->GT1                           <---------ZAT14              ---------->DOF2<------MYB83                           <---------ZAT18        <---------ZAT2      --------->MYB111(2)       <----                           --------->ZAT14        --------->ZAT2    <---------MYB52(1)      ---------              <----------DOF2                     <---------At4g35610<--------P<---------AHL20(2) <--      <----------DOF2    --------------->AtSPL8   --------->At4g35610<---------MYB55(1)     <-------- ----DOF2    *TSS ---------->DOF2               <-----------RAV1(2)<---------MYB46(3)      --------->AHL20(2)   ctcatcgtctttgctccttttaaagactgtgtactatatttccatgagttgcagctgataaagctactctggttggtatatatatatttttcatttattt  23541800                  <---------ANAC55(1)                  <---------ANAC58                  <---------ANAC46                                                      <---------ANAC46                  <---------ANAC58                                                   <---------MYB52(1)                  --------->ANAC55(2)                            <----------DOF2 ------>MYB83      <-----------GT1                         <---------------AGL15      --------->HSFB2a(2)   --------->ANAC46                           --------------->AGL15      --------->HSFC1(1) -----AHL20(2)   <---------TOE2(3)      ---------->DOF2    <---------ICU4<---------HSFB2a(2) >AHL20(2)      <---------DOF5.7(2)<---------ANAC58       --------->AHL20(2)     ------>MYB46(1) ---------GT1 --------->DOF5.7(2)  <---------ANAC58       --------->ICU4 <---------HSFC1(1) -AHL20(2)   <----------DOF2 --------->ATHB12 <----------DOF2 <-----------GT1------->TEIL   tatctacttcaccttctttaacgtgttttgttgatttgcttctaaagacttttaatggcatttattactttgtttctcgaacctacagttgtgtctgcct  23541900                                    --------->ATHB12                         <---------ANAC46                       <---------ANAC58            <---------ANAC58       <---------YAB1            <---------ANAC58<---------ANAC46        <---------MYB59<---------ANAC58            <---------ICU4                 ---------->DOF2 <----------DOF2    <-----------RAV1(1)            --------->YAB1        ---------->DOF2   cttctttctatctaacttgtctatgtggtgtctggttttgatttgcagactattcattactctgtttcgccataagaaagagaataaagaaacgttatgg  23542000                                                                 --------->ARR11(3)                                                         ------>ZmHOX2a(2)                                                        <------ZmHOX2a(2)                                                        <<<<<<<<<GATA-1                                                        <---------GLK1(1)                                                        <<<<<<<<<GATA-2                                                        <<<<<<<<<GATA-3                                                        <<<<<<<<<GATA-4                                                       <---------ARR14(2)                                                       <---------AGP1                                                       --------->ARR14(2)                                                       --------->ARR11(3)                                  --------->LBD16      <---------ARR11(3)                           <---------WOX13(1)         <---------CCA1(2)<-----------GT1                      <----------DOF2       <---------ANAC55(2)  <---------ARR11(3)             <----                      --------------------->WRI1 ------->TEIL    <---------GLK1(2)              -----               <---------ALFIN1 <---------LBD16 <---------DOF5.7(2) <-----------GT1   ---------->DOF2   agaggccaagagcccctccatctcctttgaatgatgcggagtcattaagtgaacgtagatctcttgagattttcaacccttcgagtggaaaagagacaca  23542100                                                                                      <---------YAB1                                                                                      <---------TOE2(3)                                                                                      <---------TOE1(3)                                                                                  --------->LBD16                                           ---------->DOF2                        <---------At4g35610                                        ----------->RAV1(1)                       --------->At4g35610                                       --------->REM1(1)                      --------->ARR14(2) <------ZmHOX2a(2)---------->DOF2      --------->MYB46(3)                     --------->GLK1(2) =================================HOX2a_HOX2a                                <---------ARR14(2)    <- ---MYC3     <<<<<<<<<TBF1           ----------->RAV1(1)                     --------->ARR14(2)    -- -->MYC3  <<<<<<<<<TBF1    ------>ZmHOX2a(1) <---------TOE2(3)               <---------GLK1(2) ------   tggatcaacttcttcttcttcaaagcctcctcttgatggcaacaacaaaggtagtagtagtaagtggatggagtttcaagattccgctaagattacagaa  23542200  Previous    Next  AGI:  At5g58140.1    Description:  PHOT2 (NON PHOTOTROPIC HYPOCOTYL 1-LIKE); kinase. Identical to Phototropin-2 (PHOT2) [Arabidopsis Thaliana] (GB:P93025;GB:O81204;GB:Q8RWE6); similar to PHOT1 (phototropin 1), kinase [Arabidopsis thaliana] (TAIR:AT3G45780.2); similar to PHOT1 (phototropin 1), kinase [Arabidopsis thaliana] (TAIR:AT3G45780.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47561.1); similar to phototropin-2 [Solanum lycopersicum] (GB:ABS57001.1); similar to phototropin [Phaseolus vulgaris] (GB:BAD89968.1); contains InterPro domain PAC motif; (InterPro:IPR001610); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contain Range:  from: 23541713    to: 23550337    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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