Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            --------->ANAC58          >>>>>>>>>MYB98          ------>MYB83          -------->P          --------->ANAC58    --------->SPL7                                                                              -----    ------->TEIL                                                                                -----   ------>MYB46(1)                                                                              <----   ------>MYB83                                                 -------->ATHB1             --------->ZAT2 --------->DEAR3(1)                                             --------->ATHB51           <---------ZAT2 <---------MYB52(2)                                             <--------HAHB4             <---------At4g35610 -------->ANAC58                                                <---------ICU4             --------->At4g35610 -------->ANAC55(1)                        --------->WRKY38(1)  --------->YAB1          <---------ANAC58 -------->ANAC46                ----------->HVH21               --------->AHL20(2)  --------->At4g35610 -------->ANAC58               ------>ZmHOX2a(2)               --------->ICU4       <---------ZAT2 -------ALFIN1                <------ZmHOX2a(2)                <---------YAB1       <---------At4g35610 >AGL15   ------>MYB46(1)    --------->ARR14(2)                <---------ATHB51<----------DOF2  <---- ->AGL3  <---------ALFIN1    <---------ARR14(2)     --------->DAG2 --------->AHL20(2)   <---------ANAC58 ->AGL2 <---------ALFIN1   --------->DEAR3(1)      ---------->DOF2<---------YAB1    --------->ZAT2---   acaccgaaccccaacccatctcaggctcgccgatctgactcttcgttcaccaaaaaagctatacaattattaaacactgagctttgagctgcgagcttag  23524500                                                                                                    -                                                                                                  <--                                                                                                  ---                                                                                                 ----                                                                                                 <---                                                                                             --------                                                                                             --------                                                                                             --------                                            ------->MYC3                                     --------                                            <-------MYC2                                     --------                                            ------->MYC2                                     <-------                                            <-------PIF5                                     <-------                                            <-------MYC3    <----------DOF2                  --------                                          ------------>OsbHLH66        ==============================                                       --------->ANAC58     <---------DAG2                   ========              *TSS                     --------->ANAC46<---------At4g35610                   --------             <---------HSFB2a(2)       --------->AtLEC2------>NtERF2   ------->GAMYB         -------- ---->At4g35610           <-----------TBP<------------OsbHLH66       ================================ ---->ZAT2   --------->HSFB2a(2)  --------->RAP2.6(2)<---------RAP2.6(2)      <----------ID1 ======== -----ZAT2 ------>ZmHOX2a(1) ---------->DOF2------->PIF5    ========================================= -----At4g35610        <------MYB83------>NtERF2   --------->ALFIN1  -------->P              <------- ------------>AtSPL8   <------MYB46(1) --------->ANAC58--------->At4g35610  --------->MYB52(1)   ----   ctggtactatttcctccagaccagtgggttttaaagcggccacgcacgagcgagtgccgctgctttttggcaaccccataacgacaaaaaatgacacgta  23524600    --------->ANAC46 -------->CCA1(2) -------At4g35610 ------>At4g35610 ----->ANAC58 -----------OsCBT ->TGA1a ->ANAC55(2) ->ANAC55(1) ->ANAC46 ->O2 --O2<-----------HVH21 --ANAC55(2) ->ANAC58 ==MYC_MYB                                                                                          - ============================bZIP_DOF                                                           <---- ->bZIP60(2)                                                   <---------TOE2(3)                ----- ->ANAC58                                                      <---------ANAC55(2)              ----- ==MYC_MYB                                                     <---------ANAC46                 <---- ============================bZIP_DOF                ---------->DOF2  <-----------RAV1(1)       <---- ==bZIP_DOF                 <---------ZAT14<------MYB46(1)     --------->ANAC55(2)       --------->ANAC58 --TGA1a             ---------->DOF2       <------MYB83       <---------LBD16<----------DOF2   <----- ----->ANAC58     <----------DOF2         --------->MYB59 <---------ICU4--------->ALFIN1 --------->ANAC58   agctacgcgtcaaacgatgtctttaaagtctaaactgttttagttcggtcttctcaaaagtcattacggataatgtgggcttttgtatcacaggcccata  23524700           --------->WOX13(1)       --------->YAB1                                       <---------TOE2(3) ---------->GT1                                             --------->DAG2 -----ARR14(2)                                        <---------TOE2(3)                  <---------ANAC58 ---->ARR14(2)                      --------->ZAT18   --------->ANAC55(2)                <---------ANAC58 ---->ARR11(3)                      <---------ZAT14   <---------ANAC46                   <---------ANAC46 -----ARR11(1)                      --------->ZAT14   <---------ANAC55(2)       --------->ANAC58    - -----ARR11(3)                      <---------ZAT18  <---------LBD16<----------DOF2   <---------CCA1(2) ----CCA1(2) <---------ATHB12 <----------DOF2    <---------ICU4--------->ALFIN1 --------->ANAC58  ---   tcttgaaaataatcaatcagtttatattgtctctttagtgctctcatagagtcattacggataaggtgggcttttgtatcgcaagcccatttcttgaaaa  23524800               <---------YAB1              <---------AHL20(1)              --------->AHL20(2)              --------->AHL20(1)              <---------AHL20(2)                --------->YAB1                                     --             --------->YAB1               --------->YAB1                                         ----             --------->AHL20(2)        <------------CBF         <----------DOF2                  ----    <---------ATHB12                  --------->ATHB12 --------->YAB1              --------->ARR11(3)  --------->WOX13(1)            <---------AHL20(2)    <---------ATHB12          *TSS             ---- ----------->CBF     ------------>CBF<-------TEIL   --------->WOX13(1)       <-------GAMYB   -------- ------>YAB1<---------YAB1      --------->AHL20(2)------------>CBF          <---------MYB46(3)-------   taatcaatcagtttattatattagtcaatgttatttaaattcattgaaaataatcaatcagtaagacttttttttttttggttgagaacttgagacggta  23524900  <---------AHL20(1)            --------->GLK1(2)  --------->ARR11(3)           --------->GLK1(1)  --------->AHL20(1)           <---------GLK1(1)                         --------->ALFIN1 ------->AHL20(2)         ---------->DOF2                   --------->ZAT18 ----->ANAC58          <------NtERF2                        <---------ZAT14          <---------ANAC58 ----->ANAC58         <------NtERF2            --------->ANAC58        --------->ALFIN1 ------->GT1          --------->LBD16          --------->ANAC58    ----------------->AGL1 --->GT1             --------->RAP2.6(2)       ----------->GT1    >>>>>>>>>>>>>>>>>LFY <---------SPL7 -->At5g28300       <---------LBD16 <---------LBD16         --------->ZAT14          <---------ANAC58   agaaaatattggctaatcgaaggccggaaaaagaaatctgtggaaagacaagaaaaaacgagcacagtggccagtgtgggaatttttgctggacgagaga  23525000                                                                  <---------ANAC46                                                                 <---------ZAT2                                                                 --------->ZAT2                                                            <-------TEIL                                                           --------->ARR14(1)                                                           --------->CCA1(2)                                                           --------->GLK1(2)                                                          <---------ARR14(2)                                                          --------->ARR14(2)            --------->ZAT2                                                          <---------GLK1(2)             <---------ZAT2                                                          --------->ARR11(1)     <---------MYB52(1)                                                         <---------HSFB2a(1)  <-------TEIL                                                         --------->GLK1(1)    ------>ZmHOX2a(2)                                         >>>>>>>>>TBF1   --------->HSFB2a(1) <------ZmHOX2a(2)                                      >>>>>>>>>TBF1      <---------GLK1(1)  <---------ARR14(2)                                   >>>>>>>>>TBF1        ----------->ARR10   <---------GLK1(2)                          <---------HSFB2a(2)         --------->LBD16       --------->AGP1                          --------->HSFB2a(2)        <---------ANAC46       --------->ARR14(2)              <----------DOF2<------ZmHOX2a(1)      <---------LBD16       ----------->ARR10      ----   gcaaaaccctactgcgatttatcgactactaggagaagaagaagaagaagacgatgcggagattcggggctgggaacagatccgtttccaagctcgtact  23525100                             <---------MYB52(1)                         <------ZmHOX2a(2)                     --------->SPL7                   <---------SPL7                                                         <---------At4g35610                 <---------------AtSPL3  <-----------HVH21                                --------->At4g35610                 =============================HOX2a_HOX2a                                 <---------ZAT2                 ------>ZmHOX2a(1)      <-----------RAV1(1)                         --------->ICU4                 --------->LBD16       ------>ZmHOX2a(2)                            <---------YAB1                 ===============HOX2a_HOX2a                           ------>MYB46(1)     --------->ZAT2 ----->ANAC46  ----------->RAV1(2)<---------TOE1(2)                   ------>MYB83 <---------TOE2(3)   caccatttgtgtagctatcctggtacgatcccttcgttcgatctgtcgcaagattagtatttgatcaaaaccaaatttgaaaattgatgatgagctgcga  23525200                                                                                 <---------ANAC46                                                                                 <---------ANAC58                                                       <---------ANAC58          <---------ANAC58                                                       <---------ANAC46     <---------ANAC58                                          <---------------AGL15      <---------WOX13(1)                                          --------------->AGL15    --------->ATHB12                       <-----------GT1<----------DOF2  --------->ANAC55(2)  <---------ANAC58             <----------DOF2    <----------DOF2        <---------ANAC58--------->ATHB12      <---------MYB52(1)       <---------DAG2          <---------ANAC55(2)  <---------ANAC46   tgttatctgttaatgcttttgtttttaaactcacctttctctttctcaattgagtttgcgtaatttgtttgattgatttcgtggcttagttcataccatc  23525300                            --------->SPL7                                       --------->ARR11(3)                          --------->LBD16                                        <---------ARR11(3)                        <---------LBD16                                          <---------GLK1(2)                      <---------ARR14(2)                             ----------->GT1          --------->At4g35610     <------NtERF2                 --------->YAB1   --------->ARR14(2)          <---------At4g35610   <---------DEAR3(1)    <---------ANAC58           <---------ARR14(2)   <---------SPL7     --------->ARR14(2)              <---------ANAC58    ---------->DOF2    --------   tctatcgtatggagcttcacaagggaaccggaagacggcgaagtcttctgtgttttccttgttcaatcttagggataaaagcagattttggagcgagtct  23525400  Previous    Next  AGI:  At5g58090.1    Description:  glycosyl hydrolase family 17 protein. Identical to Putative glucan endo-1,3-beta-glucosidase 6 precursor [Arabidopsis Thaliana] (GB:Q93Z08;GB:Q9FGT5); similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT4G31140.1); similar to Os02g0139300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045844.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45492.1); similar to hypothetical protein OsI_005648 [Oryza sativa (indica cultivar-group)] (GB:EAY84415.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490); contains InterPro domain X8 (InterPro:IPR012946); contains InterPro domain Range:  from: 23522592    to: 23524514    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g58100.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45500.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD19375.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ76415.1) Range:  from: 23524880    to: 23532246    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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