Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <----------DOF2                                                    <-------TEIL                                                   --------->ARR14(1)                             <---------AtMYB61     --------->CCA1(2)                <---------GLK1(2)                 --------->ANAC58                 <---------GLK1(2)                 --------->ARR14(2)      <---------AHL20(2)     ------------------------>ANAC81                        <---------ARR14(2)      --------->AHL20(2)   <---------At4g35610    --------->ARR11(1)             <---------ANAC55(2)      --------->AHL20(1)   --------->At4g35610    --------->ARR14(2)             --------->ANAC55(2)      <---------AHL20(1) <-----------RAV1(2)      <---------ARR14(2)       <---------AHL20(2)     --------->YAB1    <-----------HVH21        ----------->ARR10    <---------ANAC55(2) --------->AHL20(2) ---------->DOF2           ---------->DOF2   <---------ICU4  <---------LBD16 --------DOF2    --------->ANAC58     ----------->GT1   <---------DAG2     --------->AHL20(2)   ctttttaatataatccctcaagaaaagtcagatggtggaagagaaaaaaaaagattcgccttttagttattacttaaaaaaatacggattttgcagaaaa  23470400                                                                      --------->TOE2(3)                                                                     <---------ANAC55(2)                                                                     --------->ANAC55(2)                                                                     <---------ANAC46            --------->HSFB2a(2)                                      <---------bZIP60(1)            --------->HSFC1(1)                                 <---------YAB1            <---------HSFB2a(2)                          --------->ARR11(3)            <---------HSFC1(1)                           --------->GLK1(2)           <---------LBD16                               <---------ARR11(3)        <---------GLK1(1)                               --------->CCA1(1)      --------->ATHB12                                  --------->RVE1(1)   <---------ANAC58                                   --------->AHL20(2)    ----------->GT1 <--------   <---------ANAC58                            <---------AHL20(2)  <-----------GT1    <---------WOX13(1)   ctctgtcttgatttctggaaactggtgcaaggttttagttttcttctatataaaaaaaaaatcttcttattacgtcaattgttaaaagattgccatctct  23470500                                                             <---------ANAC46                                                             <---------ANAC58                                                             <---------ANAC58                                                       <---------DAG2   <-------TEIL                              <---------TOE1(3) ------->MYC3                   --------->AHL20(2) <---------ATHB12 <-------MYC3       <---------MYB52(1)       <---------TOE2(3)              <---------YAB1 -CCA1(2)          <-----------HVH21 ---------->DOF2   <----------DOF2   <---------YAB1            <-   tcacatgcattccatttactctgttaccccaaaaaaaaataaagtttaaggcaatgactttttgcgttcacatcgatgattctagtgtgtttaatgcatc  23470600                           ----------->GT1                           --------->YAB1                          <---------ATHB12                --------->At4g35610                              <---------ZAT14                <---------At4g35610                         --------->ZAT14                <---------ZAT2                 --------->ICU4    --------->ZAT14                --------->ZAT2            <------MYB46(1)   <---------At4g35610     <---------At4g35610                ----------->RAV1(2)       <------MYB83      --------->At4g35610    --------->MYB52(2)              <-----------RAV1(2) --------->DAG2            <---------ZAT14      <---------MYB52(1)            <-----------HVH21    ---------->DOF2            --------->ZAT2  --------->MYB52(1)       ----------->HVH21  --------->ICU4 --------->MYB59--------->ANAC46<------------AtMYB77 --------MYB52(1)  --------->At4g35610   <---------AtMYB61  <---------ZAT2  ------------>AtMYB77 <---   agttagtcagtgaccatcagctgatgcaatggtgaaaaagggtttggtcacaattaacacacagctctgtagtaactgtaacggttagcttcttcatttt  23470700                                                                         ------>MYB46(1)                                                                         ------>MYB83                            <---------AHL20(2)                           <---------ARR14(2)                           --------->AHL20(2)                            --------->ARR14(2)      ----                       --------->ANAC55(2)                             <---------MYB59           <---                       <---------ANAC55(2)                         ----------->HVH21             <---               --------->YAB1              --------->ARR14(2)      --------->WRKY12         ---------    <----------DOF2  <-----------GT1       <---------ARR14(2)     <---------MYB52(2)    <---------YAB1 --------GT1  <---------TOE2(3)           <------ZmHOX2a(1)      <---------At4g35610  <---------AHL20(2)   cacgagctttgtttctatggtagtcacgttttaattcatgggaaggatttgtttggattcaagatgccactgacctatcttctcttatttattcttgcaa  23470800                                       <---------DAG2                                       <----------DOF2                                <---------ANAC58                   <---------YAB1   <-----------GT1                       <-----------RAV1(1)            <---------YAB1    <---------YAB1                              --------->ALFIN1  --------->YAB1 <---------ICU4   <---------AHL20(2)                 --------->ICU4   <---------ANAC58 ----->ARR14(2)  --------->YAB1<---------ICU4                      --------->YAB1 <---------ANAC58 ------ARR14(2) <---------ATHB12  --------->AHL20(2)      --------->ARR11(3)      <---------ANAC58 ------GLK1(2)--------->YAB1--------->YAB1                <---------ARR11(3) <---------MYB46(3)   <-- >AtLEC2 <---------YAB1  *TSS --------->ICU4           <---------GLK1(2)<---------ANAC46          <--   attctcatcatatgattaatcatcacagaaacataattaaacttttttgtataaccagaatgtcttcagtaatgatgtgttgttgtttgcttctcttgtt  23470900                                       <-----------ARR10                                       --------->GLK1(2)                                   <------NtERF2                                  --------->ANAC58             --------->GLK1(2)                                  --------->ANAC58         --------->HSFB2a(2)                                  ----------->GT1     <---------HSFC1(2)                              <---------MYB46(3)      <---------ATERF1(1)                     -------                              --------->MYB55(2)      --------->HSFB2a(1)                 <----------   <-------GAMYB             --------->ALFIN1         <---------HSFB2a(1)                --------->YAB1  --------->MYB52(2)      <-----------RAV1(1)         --------->HSFC1(2)                <---------ATHB12  <---------MYB46(3)   <---------ARR14(2)       <-------MYC3  <---------GLK1(2)       --------->MYB52(1) ----MYB46(1)          --------->GLK1(2)        ------->MYC3--------->LBD16  --------->ZAT6 <-------- ----MYB83            <---------GLK1(2)<---------ARR14(2)  <---------HSFB2a(2) --------->ANAC46   tggtttgttgtctgaaggtagagagattctggtgggaggcaaatctaacacatggaaggctccagaatctagagatgaaacactaaaccaatggtcaggc  23471000                    --------->GLK1(2)                <-------TEIL             ---------->DOF2      --------->CCA1(2)                        <----------DOF2            --------->YAB1   ---------- -->AtLEC2         --------->ARR14(2)    --------->CCA1(2)               --------------->AGL15 -HVH21<-------TEIL<---------GLK1(2)  <---------TOE2(3)                  <---------------AGL15 ---RAV1(2)        <---------ARR14(2) ----------->ARR10         <---------MYB52(1) <-------TEIL   agaacaagattcaaaattggagattctctctgtaagtaataagatttgactttggtacatggctctgttttgtttctcataaaagttcattttgtctttc  23471100                                                                                              -------                                <-----------RAV1(1)                                        --------->CCA1(2)                         --------->ATHB12                                                 <---------ARR14(2)                        --------->ICU4                                   <------ZmHOX2a(2)--------->ARR14(2)                 <---------ANAC46                                        =======================HOX2a_HOX2a                <---------LBD16 --------->ALFIN1         <---------ANAC55(2)            ----------->GT1  --------->ALFIN1--------->LBD16               --------->MYB52(1)----------->HVH21 --------->YAB1 >ID1----------->GT1    <---------YAB1     <----------ID1<---------YAB1 <-----------HVH21<------ZmHOX2a(1)   aacagtgtggaaatacaatgcggagaatgattcagtgttgcaagtgagacaaacagattacgagagatgtgacagatcagagccaataagaggatacaaa  23471200                                                                                            <--------                                                                                       <---------ANAC46                                   <----------DOF2                                     <---------ANAC58                                   ------>ZmHOX2a(1)                                   <---------ANAC58                              <---------At4g35610                                  --------->HSFB2a(1)                 <---------At4g35610                                               <---------HSFB2a(1)       --------->ANAC58      --------->MYB59                                       <---------HSFC1(2)       --------->ANAC58     <-----------RAV1(2)                             <------ZmHOX2a(1)     <-- <-----------HVH21        <-----------HVH21       --------->ALFIN1    ---------->DOF2 <-------TEIL<-- --->DOF2        --------->At4g35610   <-----------GT1       <------ZmHOX2a(1)     --------->HSFC1(2)   gatggtcacacgaatatagagctgaagaggtcaggtcctttttacttcataagtggagaagaaggacattgccaaagaggagagaagcttcgtgttgttg  23471300  Previous    Next  AGI:  At5g57920.1    Description:  plastocyanin-like domain-containing protein. similar to plastocyanin-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G25060.1); similar to phytocyanin-like arabinogalactan-protein [Gossypium hirsutum] (GB:ABI96983.1); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) Range:  from: 23470825    to: 23471623    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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