Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           --------->ANAC58                                                                                         --------->ANAC58                        --------->At5g28300                                      <---------AHL20(1)                        <---------MYB52(1)                       <---------ICU4  --------->ARR11(3)               --------->YAB1                  --------->At4g35610               <---------AHL20(2)              <---------YAB1                   <---------At4g35610               --------->AHL20(2)           <---------AHL20(2)        <---------AHL20(2)         <---------YAB1   --------->AHL20(1)           --------->AHL20(2)   ------>ZmHOX2a(1)             <---------ICU4     <---------ARR11(3)       <---------YAB1  --------->LBD16         --------->ZAT2--------->ICU4     --------->AHL20(2)   <----------DOF2     ----------->GT1         <---------ZAT2<---------YAB1 --------->AHL20(2)   <---------DAG2  --------->ANAC46 --------->AHL20(2)    <-------TEIL      <---------AHL20(2) <----- >AtSPL8  <---------WOX13(1)   --------->TOE2(3) --------->CCA1(2)    <---------ANAC46 ---------->DOF2   accctctttttgattaattataagccggtaattccttatttaatctctgagctacgagagttcatgattatcgcttatataaatatattcaaagcaaaca  23445400                                                                                                   <-                                                                                                   --                         <---------ARR11(3)                           ------>ZmHOX2a(2)          ----                         --------->ARR11(3)                    --------->MYB52(2)              <-----                  --------->GLK1(2)----------->HVH21      <---------TOE2(2)                   <------                  --------->ARR11(3)                   --------->ANAC46                  <---------DAG2  ------>ZmHOX2a(1)      <-----------ARR10 <---------ANAC58   <-------TEIL               <----------DOF2 ----ALFIN1       <---------ARR11(3)       <---------ANAC58 <---------GLK1(2)<----------DOF2 <-------   cttcctagcaaacacatgaaaatctaaaatctccctcttgacagtgcgagtcgatacacacaggttcgtcgatctctctcttttgtttctgcttttttcc  23445500                                                                                  <------------CBF                                                                               >>>>>>>>>>>>>>>>>LFY                                                                               ------>ZmHOX2a(1)                                                                            <------ZmHOX2a(2)                                                                           --------->ARR14(2)                                                                           <---------ARR14(2)                                                                           --------->ARR11(3)                                                                        --------->SPL7                                                                        <---------TOE2(2)                                                                        <---------TOE1(2)                                                                      --------->TOE1(2)                                                                      <---------SPL7        <---------ANAC58                                             <---------ANAC58 --------ARR14(2)                                                    <---------ANAC46 ------->ARR14(2)                           --------->ANAC46        --------------->AtSPL8 ----->LBD16   <---------WOX13(1)   --------->GLK1(2)               --------------->AtSPL3 ----LBD16  <---------YAB1         <---------GLK1(2)                <---------------AtSPL3 -----GT1------>ZmHOX2a(1)       ----------->ARR10   <------------CBF<---------ANAC58 ----GT1<---------ANAC58 <----------DOF2   <---------LBD16          <---------------AtSPL8   ggtttcgattccttatgaatgactaagctttaactgagattcttctacggtagactattgtttttcgaatttcgtacgatcctccattgttttgagtttt  23445600                                                  ------>MYB83               <---------MYB59                                        <-----------GT1       <---------ANAC58                         --------->TOE1(3)      <---------MYB59              --------->TOE2(3)                --------->LBD16     <----------DOF2      --------------->AtSPL8------>MYB83                ------>ZmHOX2a(1)   <---------DAG2------>MYB46(1) <---------ANAC58     <----------DOF2     --------->TOE2(3)--------->ANAC46    <---------ANAC58 ------>MYB46(1)  <-----------GT1----------->GT1 <-----------GT1--------->TOE2(3) <---------ANAC58   tttttttctttctaattcctggttaaaccctaattttactttttactcaacctaatttcttcgtacttgcttcgccaaacctaatttcttcgttcacaag  23445700                  <---------ANAC58                  <---------ANAC58                       ---------->ID1                  <---------ANAC46           <---------WRKY18(1)                                -----            <----------DOF2           ---------->DOF2<----------DOF2                          <------           <----------DOF2    --------->ANAC58      <---------ANAC58                      <---------HSFC1(2)           <---------DAG2     --------->ANAC46      <---------ANAC58           <---------YAB1 <------    ---------->DOF2           --------->ANAC58  <----------DOF2             <----------DOF2   <------   tttcaaaatagcgccttttggcttatgcctacaagtcaaacaaagcttgactttgctttgttttttttgtttgtttgtcttttgattacagacgtttcgt  23445800    <---------ANAC58              --------->ANAC58                                  --------->At5g28300    <---------ANAC46            ---------->DOF2                                    ----------->GT1    <---------ANAC58       <---------ARR14(2)                                  --------->ARR14(2) ----->ID1                 --------->ARR14(2)                                  <---------ARR14(2) ---ANAC58           ------->TEIL --------->ANAC58                       --------->ANAC58       <---- ---ANAC58   <---------------AtSPL3                                      --------->ANAC58    -------- ---ANAC46   <---------------AtSPL8   ---------->DOF2                  ---------->DOF2---------->DOF2   cttcttgtgtgtgagtgagtacgaacatggattcgaaagcaaaagacgatgaaaaaactctaaacatggattccaaagcaaaatacggtaaagaagctct  23445900                                                                     ----------->RAV1(1)                                                                   --------->LBD16                                                                  --------->ANAC58                                                                  --------->ANAC58                                                                  --------->ANAC46                                                                 <---------LBD16                                                               <---------ARR14(2)                                                               --------->ARR14(2)                                                             --------->At4g35610                                                             --------->HSFC1(2)                                                             <---------At4g35610                                                             <---------HSFC1(2)                    ------->GAMYB                        --------->HSFB2a(2)         ---------->DOF2         --------->GLK1(1)       <---------HSFB2a(2)   <---------At4g35610 -----HSFB2a(2)  ----------->RAV1(1)                    <---------LBD16        --------->At4g35610 ->ARR11(3)     --------->REM1(1)<---------GLK1(1)     <---------LBD16 --------->MYB46(3)     -------   agacatgctcttaaagcttcaacagagagttgatgaaatccattctgagttgcaatcttcgggagcatccgcaacaacttcatctgatattcaaaacatc  23446000                                                                 <-----------HVH21                                                                 <-----------TGA1                                                                <---------bZIP60(1)                                                                <---------TGA2(1)                                                                --------->bZIP60(1)                                                                <---------ANAC58                                                                <---------ANAC58                                                     --------->LBD16                                                   ------>ZmHOX2a(2)                                                  --------->ARR14(1)                                                  <------ZmHOX2a(2)                                                  --------->CCA1(2)                                                 <---------ARR11(3)          ----------->HVH21                                                 --------->AGP1 --------->TGA2(1)                                                 --------->ARR11(3)         <---------HSFB2a(2)                          --------->ATHB12       --------->ARR14(2)  --------->ANAC55(2)                          <---------ICU4 ------>NtERF2    --------->DAG2   --------->ANAC46            --------->MYB46(3)          --------->ANAC58 <---------ZAT14<---------GLK1(2)     --------->GLK1(1)   <---------YAB1 --------->ANAC58 --------->ZAT14<---------ARR14(2)      -----   ------->GAMYB       <---------At4g35610       <---------ARR14(2)  <---------ANAC55(2)        ===== -->ARR11(3)<---------MYB111(2)         --------->ANAC46 ---------->DOF2--------->ARR14(2)  <--------   tacaacgaaatccaacaacttctacagatgattactaagaagacgcctcaagatccgagtaaagtgtcgtcacatattcgcgacggtatcaattctgatc  23446100                                                               ===============================HOX2a_HOX2a                                                               ------>ZmHOX2a(2)                                                              <------ZmHOX2a(2)                                                              ================================HOX2a_HOX2a                                                             --------->AGP1                                                             <---------AGP1                                                             --------->ARR14(2)                                                             <---------ARR14(3)                                   <---------CCA1(2)         --------->ARR14(3)                          ------>ZmHOX2a(1)                  <---------ARR14(2)                     <---------GLK1(1)   ---------->DOF2     <-----------ARR10                      - ->ZmHOX2a(2)        --------->GLK1(1)--------->TOE2(3)      --------->ARR11(3)                <----- ================================HOX2a_HOX2a                 <---------ARR11(3)        <------ZmHOX2a(1) -YAB1      <----------DOF2  ------>ZmHOX2a(1)              <---------CCA1(2)  <-----------RAV1(1)  <   ccaaaacttggaaactttgtttgatttcctccttctcttatctcaaagtttttgtattttgcagatcttgacatggtgtttgtgttggaggaagttggac  23446200                                    <---------HSFB2a(2)                                  <------ZmHOX2a(2)                                 --------->ARR11(3)                                 <---------ARR14(2)                                 --------->ARR14(2)                                <------ZmHOX2a(1)                              <---------TOE1(3)                              <---------TOE2(3)                       ------>ZmHOX2a(2)                                               <---------ANAC46                      =================HOX2a_HOX2a                                     <---------ANAC58                      <------ZmHOX2a(2)                                                <---------ANAC58                     --------->AGP1------>ZmHOX2a(2)                           <---------ANAC58                     <---------ARR14(2)                                        <---------ANAC58                     --------->ARR14(2)                                        <---------ANAC46                     --------->ARR11(3)                         <---------ANAC58  --------->At4g35610                     --------->ARR14(3) --------->RAP2.6(3)     <---------ANAC46  <---------At4g35610       <---------ANAC46================HOX2a_HOX2a              <---------ANAC58--------->ZAT18   --------->SPL7    <---------ARR11(3) --------->SPL7 <---------ANAC58       <-------TEIL --------->TOE1(2)   <---------ARR14(3)<---------ARR14(2)  <---------ANAC58  --------->ALFIN1 -------->TGA1a     <---------GLK1(1)  --------->ARR14(2)  <---------ANAC58<---------ANAC46         < ----ZAT18          --------->GLK1(1)  --------->MYB52(1) --------->ATHB12 <---------ANAC58        -- ---------TGA1a    ----------->ARR10--------->HSFB2a(2)<---------ANAC58    <---------ANAC58  <-------   actcgtgcgacttgtgccagagagatcttgctaaggatccagaacggcctaatgcttccttgagtggcttacaagaggcgtgcgtgctgtcttgtggtca  23446300  Previous    Next  AGI:  At5g57820.1    Description:  protein binding / zinc ion binding. contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 23445827    to: 23446572    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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