Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 --------->TOE1(3)                                                                               --------->TOE2(3)                                                                            ------>MYB46(1)                                                                            ------>MYB83                                                                          <---------MYB59                                                                          --------->AtMYB61   <------                                                                         --------->MYB46(3)   <------                                                                       ------>MYB46(1)    <---------ZAT14                      ------>MYB46(1)                                  ------>MYB83       <---------ZAT18                      ------>MYB83--------->ICU4                     <---------MYB59      --------->ZAT18                    --------->AtMYB61 <------ZmHOX2a(1)           <---------ARR14(2)      --------->ZAT14 ------ZAT18        <---------MYB59 --------->MYB59               --------->ARR14(2) ---------->DOF2   accctagacatcaagaatagaaccaaaccctaagaaattaggaacagaaccagacccttagacatcaagaaccgaaccaaaccttaacaaagttcacttt  23408400                                                                                         <---------ANAC46                                                                      --------->ZAT14    --------->ANAC55(2)                             ---------->DOF2                          <---------ZAT14    <---------ANAC55(2)                         --------->ARR14(2)               --------->ZAT6          ---------->DOF2                         <---------ARR14(2)             --------->MYB52(1)   --------->GLK1(1)                        <------ZmHOX2a(1)       ------->TEIL       ------->GAMYB--------->YAB1 ----DOF2         ---------->DOF2          --------->At4g35610  ----------->RAV1(1)      <---------ANAC55(1) ---DAG2         <------ZmHOX2a(1)--------->WRKY18(1) <---------MYB52(2)----------->GT1 <------------   tggactctcgaatagtagaggaaagaggattcaaaggtcaagagtagatgaatcaaactaacagttcaacagaacagagaaatcaaaagttatgtgttaa  23408500                                            --------->ANAC58                                           ------->TEIL                                        --------->ANAC46   ------->GAMYB  --------->KAN4(2)                                        --------->ANAC58  <---------MYB52(2)                                 ----------->GT1     --------->ANAC58    --------->KAN4(1)                                <---------TOE1(3)    --------->ANAC46    <---------KAN4(1)                                <---------TOE2(3)    --------->ANAC58   <---------KAN4(2)          --                         <---------At4g35610--------->ANAC58           --------->YAB1              -- -----------TaNAC69(2)<-------TEIL      --------->ANAC58  --------->MYB46(3)                       --   acagaaacagagccaagagagaaattcatctactaaggttacacgaacgcaaaacacacaacaaaccattcaagaataatctcatcaaaaattcaaaata  23408600                                                                                   <---------ARR11(3)                                                                         ---------->DOF2                                                                       <---------------AGL15                                                                  <---------ANAC55(2)          ------                                                         --------->CCA1(2)         --------->GLK1(2)                                                        <---------ARR11(3)         --------->ARR11(3)                                                    ---------->DOF2   ----------------->AG     <-----                                                  --------->ANAC58<---------ANAC58 <-----------ARR10                                                  --------->ANAC58<---------ANAC58 <---------ARR14(2)           <-----------GT1                        --------->ANAC46--------->ANAC55(2)--------->YAB1 ------->TOE2(3)                            --------->CCA1(2)   <-----------GT1    --------->ARR14(2) ------->YAB1          ----------->HVH21 ----------->GT1--------->ARR11(3)--------->DAG2       <----- ------->TOE1(3)     --------->YAB1    XXXXXXXXXXXXXXXXXXXX>MIR835-3P-------->P   <---------GLK1(2)   atcttaagtcattctacaatctaacatgacagataatttggagaagataaacacgaaagatactagttacttaccaaaagttgagaatcttcatgggagt  23408700             --------->GLK1(2)             --------->ARR14(2)             <---------ARR14(2)            <---------GLK1(1)            --------->GLK1(1)          <------ZmHOX2a(1)    ==============================HOX2a_HOX2a    =============HOX2a_HOX2a    ------>ZmHOX2a(2)   ===============================HOX2a_HOX2a   ==============HOX2a_HOX2a   <------ZmHOX2a(2)  --------->ARR14(2)  <---------ARR11(3)  --------->ARR14(3)         <---------GLK1(1)                                   <---------ARR14(2)  <---------ARR14(3)         --------->GLK1(1)                                   --------->ARR14(2)  <---------AGP1            <---------ARR14(2)                                  <------ZmHOX2a(1)  <---------ARR14(2)        --------->ARR14(2)                        <---------ANAC58  --------->ARR11(3)--------->CCA1(2)                                 <---------ANAC46 --->At4g35610     --------->ARR14(2)                                 <---------ANAC58         ------ ----At4g35610     <---------ARR14(2)      --------->ZAT6         <----------DOF2<---------GLK1(2)  < --GAMYB<---------TOE2(3)  <------ZmHOX2a(1)            <----------DOF2      <-----------RAV1(2)-----   tgaagatcttgaggaaatctggatatggaggaaacccattttctaacaccatcttcttctttttttgtctttgcttgagtcaggattctacaaatgaaaa  23408800                                                                                        <-----------GT1                --------->ARR11(3)                                                    <---------REM1(1)                --------->GLK1(2)                                                    <---------------AtSPL8                --------->ARR14(2)                                                   <---------------AtSPL3                <---------ARR14(2)                                                   --------------->AtSPL8       <---------MYB52(1)                                                           <-------GAMYB     <---------ZAT6                                           <------------CBF     <-----------RAV1(1)     <---------ANAC58                                   <---------ZAT6   <---------ANAC58     <---------ANAC58                                 <---------ANAC58   <---------ANAC55(1) ---->DOF2     <---------GLK1(2)              *TSS<----------DOF2        --------->ANAC55(2)       <- ---------REM1(1)                      ------->TEIL   <---------ANAC46   <---------ANAC46    -------- ---->DAG2<---------ANAC46         <---------TOE2(3)  <---------ANAC58   <---------ANAC58    --------   agctgtagcgttatgtagaatcttcaacaatgtagttaatgtatgtgagagtctttgagtgtgagattgggttttgcgtgagtgtgtgttgtaccactca  23408900                                     <-----------HVH21                                     <-----------TGA1                                    --------->ANAC55(2)                                <---------AHL20(2)                                    <---------ANAC55(2)                          --------->ANAC58                                    --------->ANAC58                             --------->ANAC55(1)                                    --------->ANAC46                             --------->ANAC58                                    --------->ANAC58                             <---------ANAC55(2)                                    --------->bZIP60(2)                         <---------LBD16                                    --------->ANAC55(1)        <---------------AGL15  --------->ARR11(3)                                   <-------TEIL                --------------->AGL15  <---------ARR11(3)    <---------ZAT14                <-----------STF1           <-----------------AG    <---------AHL20(1)    --------->ZAT14--------->DAG2 --------->CCA1(2)           ======================================= --------ATHB12   ---------->DOF2--------->ARR14(2)           <-----------------AGL1--------->ARR14(2) ->ANAC58 ---------->DOF2        <---------ARR14(2)           <-----------------AGL2<---------ARR14(2) ->ANAC58<---------WRKY45        --------->ARR11(1)    <----------DOF2      --------->YAB1   aatcagtttagtcaaagtcataaagcaaatttttagatacgtcatttgcagagagagctttgatactggaattggcaataaacacggatatatttgcaga  23409000                                                                                   <---------YAB1                                                                               <---------TGA1a                                                                               <---------O2                                                                               --------->O2                                           --------------->AtSPL8              --------->TGA1a                                           <---------------AtSPL8              ======================                                    ----------->GT1                        <-----------HVH21---------                                >>>>>>>>>>>>>AGL25                        --------->O2  <------MYB46(1)                             ----------------->AGL1                       --------->bZIP60(2)                             --------------->AGL15   <---------AHL20(2)   <---------bZIP60(1)                             <---------------AGL15  <---------AHL20(2)    --------->bZIP60(1) <----------DOF2            ----------------->AGL2  --------->AHL20(2)<-----------HVH21 <------MYB83 ============================================MADS_MADS         <---------AHL20(2)  ----------->HVH21   gagctttgaaaaactttgtactagagagactcccaaaatagaaaatttgtacaaataaatgatataaaaatgggtcatgtcacttgtgataggtttgttt  23409100                                                                              <------ZmHOX2a(1)                                                                        <---------bZIP60(1)                                                                        --------->bZIP60(1)                                                                      <---------RAP2.6(3)                                                                      ------>NtERF2                                                                      <---------DDF1                                                                      ----------->RAV1(1)                                                                     --------->DEAR3(1) --------->ARR14(2)                                                  --------->DREB2C(2) <---------ARR14(2)                                                  --------->RAP2.6(2) --------->ARR11(3)     --------->YAB1                               --------->RAP2.3(3) <---------ARR11(3)    <---------ATHB12     --------->AHL20(2)       ----------->HVH21         <----- --------->GLK1(2)   --------->WOX13(1)  <---------ICU4             --------->DEAR3(2)         <----- ========================bZIP_DOF   --------->ZAT14<---------ARR14(2)<---------ETT(1)    <---------AHL20(2) >MYB52(2)    ---------->DOF2       --------->ARR14(2)    ----------------->AGL1         --------->AHL20(2)   caaaatctggtttcaaataagcccaatcataagacatgtatactcattaaacaaatatgggcctgtatgggccgacatcaggacaagagaataaaatatg  23409200                                                  ------->TEIL                                                  --------->ARR14(2)                                                  <---------ARR14(2)                                               --------->ANAC55(1)                    <---------TOE2(3)          <---------ANAC55(2)       ----------->HVH21                       --------->ANAC55(2)               --------->ZAT6   <---------ARR11(3)        ----------->GT1   --------->ANAC58                 <---------TOE2(3)   --------->ARR11(3)      ---------->DOF2     --------->ANAC58     --------->At4g35610 ----YAB1---------->ID1 ----------->GT1 --------->YAB1              <---------At4g35610 ----TOE2(3)        --------->DAG2      --------->TOE2(3) <----------DOF2      <-----------GT1   <---   gttgagaccttgacgttttaaaaaggttgtaaagaaaaacaatgttaacacgtatatgggctttattttgggctgagtttttaacattaggcctggctct  23409300  Previous    Next  AGI:  At5g57720.1    Description:  transcriptional factor B3 family protein. similar to transcriptional factor B3 family protein [Arabidopsis thaliana] (TAIR:AT3G06160.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82365.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) Range:  from: 23406971    to: 23408846    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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