Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               --------->HSFB2a(1)                                             <---------HSFB2a(1)                                             <---------HSFC1(2)                                             --------->HSFC1(2)                                           ---------->DOF2                                          --------->LBD16                                        ------>ZmHOX2a(2)                 <----------DOF2 <----------DOF2                       <------ZmHOX2a(2)            <---------YAB1  --------->ANAC58 ---------DAG2       <---------CCA1(2)--------->ARR14(2)          <-----------GT1   --------->ANAC58 --->NtERF2<-----------GT1      <-----------RAV1(1)    <----------DOF2 <---------YAB1 ------ALFIN1     <-----------GT1     <---------ARR14(2)         <---------YAB1   ---------->DOF2   -   cacctttctatatttactattttctatcttcaatttgttggatccgaaagttccttccttttttgtttttattattctttattcaaaagccagtttttgt  23401600                                           <----------DOF2         <----------DOF2                                      <-----------GT1       <-----------GT1                                   --------->YAB1      <----------DOF2                                   <---------ICU4<---------CCA1(2)--------->TOE2(3)        <---------GLK1(1)         <---------ATHB51--------->ARR11(3) ----->ZmHOX2a(2)                 <---------ATHB12<---------ARR11(3)<---------MYB52(1)   gatccatttgaaatcccaatttgtctacttctcccaataataactctttttatatctctttttttcttcctttacttcagaaaacaagtctaccttcttc  23401700                                                               <------------CBF                                                             --------->ARR11(3)                                                         --------->ALFIN1                                                        <---------MYB52(1)                     <-----                                                       <---------DEAR3(2)                      ------                                                      <---------DREB2C(2)                     <------                                      <----------DOF2 <---------MYB46(3)                --------->ARR11(3)                                     <---------DAG2   <---------DEAR3(1)                <---------ARR11(3)                                ---------->DOF2       --------->MYB55(2)                --------->GLK1(2)                            ------>MYB83             <---------ORA47(1)            ------->GAMYB                            ------>MYB46(1)   <---------AHL20(2)                  --------->MYB46(3)   tcttcttctaccttcttctcttataaaacctatctaaagccttttcatttttttggccggtgggatattgtttgaatgagttcaaccaaaaatcttatat  23401800                     --------->YAB1                    <------ZmHOX2a(2)                   <-----------HVH21                 --------->LBD16                                ------>MYB46(1)                --------->HSFB2a(2)                             ------>MYB83                <---------HSFB2a(2)                           <---------MYB59       ====================HOX2a_HOX2a                       --------->ANAC58       ------>ZmHOX2a(1)                                     --------->ANAC58       ---------->ID1       <----------DOF2                                --------->AHL20(2)           <-----------GT1 ----AHL20(1)  <---------LBD16                        <---------AHL20(2)    ------------>CBF --->ARR11(3) <-----------GT1                      --------->AHL20(2)       <-------TEIL ---CCA1(2)  <-----------GT1                       --------->ATHB51   ---------->DOF2     <----------   attcttatccttttttttcccgatcagaactcagttcataaaacttgtctgaataatttaagaacccaactcaaaagattcaatttttcgtttttccatt  23401900                                  <---------YAB1                                 --------->AHL20(2)                                 <-----------TBP                           <-------TEIL        <---------AHL20(2)                          --------->ARR14(1)  --------->AHL20(2)                          --------->CCA1(2)-------->ATHB1                         <---------ARR14(2)<--------HAHB4                         --------->ARR14(2)--------->ATHB51 <---------YAB1                         <---------GLK1(2) --------->AHL20(2)        ---------->DOF2                         --------->ARR11(1)<---------AHL20(2) <------------CBF                   ----                     ---------->DOF2      <---------ATHB51  --------->AHL20(2)                -------    ---------->DOF2 <---------AHL20(2)    --------->ICU4    <---------AHL20(2)               -------- -GT1               --------->AHL20(2)------------>CBF----------->RAV1(1)                --------->ZAT6   ttccttcaaagtcttagcctaataaaagattcgatttttatacaattatttaatacccacatataattgaagaaagagagacagagagataacacaaaag  23402000                                                                  <---------ALFIN1                                                             --------->ATERF1(1)                                                            <---------ATERF1(1)                                                          <------NtERF2                                                          --------->ATERF1(1)                                                         <---------SPL7                                                         --------->LBD16                                                       <------NtERF2                             <---                                                       <---------LBD16                           ----                                                       --------->ATERF1(1)                     ------                                                      ------>NtERF2                          --------                                               --------->GLK1(2)<---------ATERF1(1)       --------->DEAR3(1)                                              <---------GLK1(2) ------>NtERF2          ------->GAMYB                                   <---------YAB1 ----------->HVH21------>NtERF2      --------->MYB46(3)                              <---------------AtSPL3  <---------RAP2.3(1)           --------->WOX13(1)                              <---------------AtSPL8 <---------TGA1a<------NtERF2 <---------ATHB12                      --------->ZAT2        ------->GAMYB<---------ATERF1(1)     ------>MYB83<-------     <---------DOF5.7(2)      --------------->AtSPL3 ==========================================MYC_MYB ----->ALFIN1         <---------At4g35610   ===================MYC_MYB      <-----------GT1<---------ATERF1(1) -->DAG2              <---------ZAT2       --------->MYB46(3)--------->At4g35610 ------>MYB46(1)----- -->DOF2              --------->At4g35610 <---------At4g35610<---------At4g35610--------->WOX13(1)   tggaagtaaacgaagaacgatgagagctggtttaagtacgattcaacagactctgacgccggaggctgccaccgttttaaaccaatcaatcgccgaagcc  23402100                                         <---------ALFIN1                                 <-------MYC3                                                  ------                                 ------->MYC3                                              ------>ZmHOX2a(2)                                <---------O2                             ------>NtERF2     ==========         <---------ICU4         --------->O2                            ----------->HVH21 ===========  <------NtERF2                 --------->ANAC46                  <---------GLK1(1)      <-----------ARR10 ------LBD16                  <---------ALFIN1              --------->ZAT2          <---------ARR14(2) -->NtERF2<---------At5g28300<---------REM1(2)              <---------ZAT2          --------->ARR14(2) --->ATERF1(1)             --------->ANAC46              ----------->RAV1(2)       <---------CCA1(2) ->ARR14(2)               ------>ZmHOX2a(1)<---------ALFIN1 <---------At4g35610<---------ANAC58------ --ARR14(2)         --------->AtMYB61   --------->MYB46(3) ------>ZmHOX2a(1)   <---------ANAC58------ ---->DEAR3(1)     --------->MYB46(3)  ------>NtERF2<---------GLK1(2)   --------->DEAR3(1)<------ZmHOX2a(2)   gcgcgtcgtaatcacggccaaaccactcctctccacgttgcagccactcttctagcttctcctgctgggtttctccgacgagcttgtatccgatctcacc  23402200                                                                                           --------->KAN4(1)                                                                                           <---------HSFB2a(1)                                                                                           --------->HSFB2a(1)                                                                                           <---------KAN4(1)                                                                                     <---------LBD16                                                                                    <---------ANAC46                                                                                    <---------LBD16                                                       ---------->DOF2             <---------LBD16                       <---------ANAC58            <------NtERF2               <---------ALFIN1                       <---------ANAC58           ------>NtERF2                --------->AtMYB61                     --------->REM1(2)         <-----------HVH21              --------->MYB46(3)   --                     <-----------HVH21         <---------ATERF1(1)     --------->At4g35610 --------->ICU4 --->ANAC58  <----------DOF2                 <---------At4g35610     --------->MYB46(3)   <---------KAN4(2) ===================HOX2a_HOX2a          <----------DOF2   <---------ANAC58--------->REM1(1)   ------ ===================HOX2a_HOX2a        --------->At4g35610 <---------ANAC58--------->MYB46(3)  ------ --->ANAC46  ------>ZmHOX2a(1)    --------->ZAT2 --------->DEAR3(1)--------->MYB52(1)--------->LBD16 --->ANAC58 --------->TOE2(3)     <---------ZAT2--------->ATERF1(1)----------->RAV1(1)--------->LBD16   ccaattcttctcatcctttacagtgtcgagccctcgagctctgcttcagcgtcgccttagagcgtctcccaacagctacaaccactccggggaatgatcc  23402300                          <----------DOF2                        ------>NtERF2                       <---------ANAC46                      <------NtERF2                      --------->ATERF1(1)                      --------->RAP2.3(1)                     <---------RRTF1(1)                     ------>NtERF2--------->At4g35610                     <---------ERF1                     <---------DEAR4(2)                     <---------RAP2.3(1)                     <---------ORA47(2)                                                        <-----                     <---------ATERF1(1)                                                       <-----                     <---------RAP2.6(1)                                           <-----------RAV1(1)                    <---------RRTF1(2)                       <---------LBD16       <---------MYB46(3)                    <---------DREB2C(2)                    <---------SPL7         <---------MYB52(1)                    <---------RAP2.3(2)                 <-------GAMYB          --------->MYB46(3)                    <---------ATERF1(2)                <---------MYB46(3)      <------------AtMYB77                    <---------RRTF1(3)                --------->ALFIN1      --------->MYB46(3)-------       ---------->DOF2--------->DEAR4(2)             --------->LBD16       --------->At4g35610<------   ------>ZmHOX2a(2)--------->ATERF1(2)             --------->DEAR3(1)    ------->GAMYB     ---------  <------ZmHOX2a(2) <---------RAP2.6(2)             <---------ANAC46   ----------->RAV1(1)  <-------- ------->DEAR3(1)   <---------RAP2.3(3)           ------->GAMYB--------->LBD16-------->P   --------->At5g28300 >ZmHOX2a(2)        <---------DEAR3(1)           --------->DEAR3(1)   --------->MYB46(3)   <-------GAMYB --->MYB46(3)    <-----------RAV1(1)             --------->ANAC46   ----------->RAV1(1)   <---------MYB46(3)   accgatctcaaacgcgcttatggcggcgcttaaacgagctcaagctcatcaacgccgtggttgtccggagcaacaacagcaaccgttgttggccgttaaa  23402400                                                                                       <---------DOF5.7(2)                                                                                       ---------->DOF2                                                                                     <---------MYB52(1)                                                                                     --------->DOF5.7(2)                                                                                    --------->At5g28300 ----TOE2(3)                                                                      <------NtERF2 ----TOE1(3)      --------->ARR11(3)         --------->MYB52(2)                  ------>NtERF2------- --->DOF2         <---------ARR11(3)     <---------ZAT6                          --------->LBD16 ---DOF5.7(2)    <---------ICU4     ------>ZmHOX2a(2)                           --------->ANAC46 >DOF5.7(2)<---------At4g35610    --------->ARR14(2)          --------->GLK1(2)<---------LBD16<------ -MYB52(1) --------->At4g35610    <---------ARR14(2)   <---------YAB1<----------DOF2<-------GAMYB   gttgagcttgaacagctcattatctcgattttggatgatccgagtgttagtcgggttatgagagaagctagcttttcaagtcccgccgttaaagctacaa  23402500  Previous    Next  AGI:  At5g57710.1    Description:  heat shock protein-related. similar to heat shock protein-related [Arabidopsis thaliana] (TAIR:AT4G30350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66544.1); contains InterPro domain Clp, N-terminal; (InterPro:IPR004176) Range:  from: 23402020    to: 23405579    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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