Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       --------->ANAC58                                     --------->ANAC58                               --------->LBD16                              --------->ANAC55(2)                          ------>ZmHOX2a(2)                         <------ZmHOX2a(2)                        --------->ARR11(3)                        <---------ARR14(3)                        <---------ARR14(2)                        --------->ARR14(3)                        <-----------ARR10                        --------->ARR14(2)                        <---------ARR11(3)                       <------ZmHOX2a(1)  --------->REM1(1)             <---------AtMYB61--------->ANAC46         <---------At4g35610  --------->ANAC58         --------->At4g35610  --------->ANAC58                    <-------TEIL          <---------ICU4      --------->At4g35610<---------HSFB2a(1)                 --------->SPL7      <---------ZAT6      <---------At4g35610--------->HSFB2a(1)               <---------SPL7     --------->ATHB12      - -------->DOF2<---------ZAT18<---------LBD16         --------->At4g35610     <---------YAB1         <   taaaagtcatcagcagtggtcttcaggatcttccgcaatacgcttcaacatgaatagcagccatacggtccatgaagtgatcagtggtaatcactgcaag  23363100            --------->ARR14(2)            <---------ARR14(3)            --------->ARR14(3)                                        <---------ICU4            --------->GLK1(2)                            --------->ZAT14       --------->YAB1            <---------ARR11(3)             --------->TOE2(2)         --------->At4g35610            <            --------->ARR11(3)             --------->TOE1(2)       --------->YAB1     ------>ZmHOX2a(1)  ------>ZmHOX2a(2)                        --------->TOE2(3)      <---------YAB1--------->MYB59    -- -------->ARR11(3)                   <------ZmHOX2a(2)   <---------ZAT14--------->At4g35610        <- ---------ARR11(3)           --------->ANAC46            --------->ZAT18<---------At4g35610        --   atgatcttcaacaaaatcttcaatcttcttccagtcacgatcaaacctaagaaacagagagcagtagtatcatcagcacaatcaggtcctgctaaaatca  23363200                                 <---------ICU4                                 -------->ATHB1                                 --------->ATHB51                                <---------AHL20(2)                                --------->ICU4                  ------>ZmHOX2a(2)                                --------->AHL20(2)             <------ZmHOX2a(2)                                <---------YAB1                --------->ARR11(3)                                --------->AHL20(1)            <-----------ARR10                             --------->AHL20(2)               --------->AGP1            --------->WOX13(1)                            --------->AHL20(2)                <---------ARR14(2)      <------ZmHOX2a(2)                   --------->ANAC58                           --------->ARR14(2)      <--------------      <----------DOF2    --------->YAB1                       <---------AGP1         <---------ARR11(3) --------->YAB1    --------->ANAC46                           <---------ARR11(3)     --------->ARR11(3) ---------YAB1<-----------GT1<---------AHL20(2)              <---------CCA1(2)   ---------->DOF2 ------->AHL20(2)  --------->ANAC58                  <---------HSFB2a(2)     --------->YAB1       --- --------AHL20(1)--------->AtMYB61 <---------YAB1 <----------DOF2      <---------At4g35610 --------->AHL20(2) ------->AHL20(1)----------->RAV1(1)<-----------GT1  --------->HSFB2a(2)    <---------ATHB12      ---   atataatacttttaaaaaaccacacaagtataaaattattacagttgaagtgcttcaagaagcagatctatttagctaatcaaaaaagatcaattaactc  23363300          <----------DOF2         ------>ZmHOX2a(2)        <---------RVE1(1)        <------ZmHOX2a(2)       --------->ARR14(3)       <---------AGP1       --------->AGP1       <-----------ARR10       <---------ARR14(3)       --------->ARR11(3)       --------->ARR14(2)                                                        ----------->HVH21       <---------ARR14(2)                                                      <---------ANAC58       <---------ARR11(3)                                                 <---------At4g35610      <---------CCA1(2)                      --------->YAB1              <---------ARR14(2)      <---------ARR14(1)               --------->ZAT6                    ------->TEIL   <---------At4g35610             <---------MYB59                       --------->ARR14(2) -------WRI1             <-----------GT1    <---------YAB1              <---------CCA1(2) ------>ANAC58   --------->At4g35610 ------>MYB46(1)                  --------->ANAC55(2) ------>ANAC58   <---------At4g35610 ------>MYB83              <---------ZAT18 <---------ANAC58 <----   aaggaagcagatcttttttagcttaagttactactgacctaacactatcataaacttccctctcgttcacttatgtatctgccttgacatatcagtttat  23363400                             ------>ZmHOX2a(2)                             ==================HOX2a_HOX2a                            ===================HOX2a_HOX2a                 <---------YAB1                 <---------AHL20(2)                 --------->AHL20(1)                --------->AHL20(2)                --------->YAB1          <------ZmHOX2a(1)               <---------ATHB51       <---------TOE2(3)           <------NtERF2    <------ZmHOX2a(2)          --------->ANAC58 --------->ARR11(3)                 --------->ANAC58               <-------          --------->ANAC58 --------->ARR14(2)                 --------->ANAC46               <-------      --------->ANAC58     <---------ARR14(2)                 --------->ANAC58              <--------      --------->ANAC46     <---------AGP1                   <---------ANAC58              --------->YAB1      --------->ANAC58     <---------ARR11(3)               <---------ANAC58           ------>MYB46(1)    ---------->DOF2       <------ZmHOX2a(1)           <-------TEIL--------->WOX13(1)   ------>MYB83 -----CCA1(2)  <---------ATHB12  --------->ZAT6      --------->AtLEC2        <---------GLK1(2)   atccctaaaagccagcaataatattgaaggatctaacactaaggaaaactaaaacatgcattgctcgccaatccaaacagaaactcaccaaatcgtaagt  23363500                              <---------LBD16                                            ------------                             ----------->RAV1(2)                                         <-----------   <---------ARR11(3)        <---------ANAC58                   ------------>CBF        ------------>CBF --TOE2(2)           <------------CBF                 <------ZmHOX2a(1)                 ------------- --TOE1(2)      ------>MYB83 <---------ANAC58        ----------->GT1              ---------->DOF2 -MYB52(1)      ------>MYB46(1)                     <---------TOE2(3)           <---------YAB1    <--   ttcgatatcatccaaaccaaacaaattgaatgcctggggagagagagtcttactgaggaaaaatgcttcaattagcccaaatattaaagtcccaatataa  23363600                                                                                                   --                                                                   <---------AHL20(2)         -------                                                          <---------ARR11(3)           --------->ANAC58                                                          --------->AHL20(1)           <---------ANAC55(2)   <----------DOF2                                        <---------AHL20(1)           --------->ANAC58   <---------DAG2                                    ------------>CBF                 <---------LBD16 --->AGL15                                          --------->ANAC58               <-----------HVH21 ----AGL15                                 <---------AHL20(2)     --------->AHL20(2)----------->HVH21 ---->AGL3 <---------AHL20(2)  --------->YAB1       --------->ANAC58           <---------ARR14(2)  -- ----ZmHOX2a(1)            --------->AHL20(2)  --------->YAB1 <---------YAB1   --------->ARR14(2)  <-   ggagactttttgttaaatttttagcccgattaaacataacattttttaatcagcatgcaatattttcatttaatgtgctcggttctgtcacggacactga  23363700                                                                 ---------->ID1        <-----------RAV1(1)       <-----------GT1                                       <----------DOF2          <---------YAB1-    --------->ICU4                                         ========================================== --------->GT1  <---------LBD16                            --------------->AGL15     <------------CBF ---->HVH21    <-----------GT1                             <---------------AGL15 <---------YAB1------ ------->ANAC55(2)                  ------------>CBF <-----------GT1          --------->ICU4   ------ --------ANAC55(2)  <-----------HVH21             <---------AHL20(2)--------->ICU4 <---------AHL20(2)   catgtaatttttcattttcacgggtgagataattttcagacaatattagaatttttttcttccctttgtagttattcgaaattatgttattgttgggaag  23363800                                                       <---------------AGL15                                                      <-----------------AGL3                                              --------->ATHB12       --------->YAB1                                         --------->YAB1------>ZmHOX2a(1)                                      --------->TOE2(3)--------------->AGL15                                   ------>MYB83       ----------------->AGL2                                   ------>MYB46(1)    ----------------->AGL3                                 <---------MYB59      --------->TOE2(3)       <---------At4g35610                                --------->ANAC55(2)  ------>ZmHOX2a(2)        --------->At4g35610   -                                <---------ANAC55(2)  =======================HOX2a_HOX2a         <---- ---------->GT1               <-----------GT1<---------AHL20(2)      <------ZmHOX2a(1)         <----- ======================================================================MADS_MADS           --------->ANAC55(2) --->ANAC58                <---------AHL20(2)<---------YAB1         ----------->GT1        <---------ANAC55(2) --->ANAC58               --------->AHL20(2)<---------AHL20(1)   ---------->DOF2           ----------   taatgaaaaaaaactcaacaaaattcgatttaatacctatccataatattattgatcctaaaaatagaaaaggataattttgctgagtcagaaacgtgat  23363900               --------->LBD16  --------->SPL7              <---------HSFB2a(2)              <---------ANAC46<---------SPL7           <-----------GT1    --------->TOE2(2)  ----------->HVH21           --------->TOE1(2) <---------HSFB2a(2)        <---------------AtSPL3 -------->ANAC46   ---------->DOF2                           --------->ANAC58 ------TaMYB80--------->HSFB2a(2)       <----------DOF2      --------->ANAC58                   ----- ----ARR11(3)<---------LBD16--------------->AtSPL3     <---------AHL20(2)               ----------->GT1 ->GT1 <---------MYB52(1)  <---------DOF5.7(2)        --------->AHL20(2)         <-----------HVH21   attcgcgacgttgtttccggataaagagtaaacgtacgactgctttaactcacctataaaatcacgaccgtcgatttcatttatgtcaaggggcaaaact  23364000  Previous    Next  AGI:  At5g57650.1    Description:  eukaryotic translation initiation factor-related Range:  from: 23363023    to: 23363511    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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