Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               --------->AHL20(2)                                            --------->AHL20(2)                                            <---------AHL20(2)                                         <---------AHL20(2)          ------>ZmHOX2a(2)             --------->AHL20(2) ------->GAMYB                          <---------AHL20(2) -------->ANAC46            ------>ZmHOX2a(1)<---------AHL20(2) -------->ANAC58    <---------YAB1    --------->YAB1                                  <---------DAG2 -------->ANAC58   <-----------GT1  ------->TEIL                          --------->At4g35610 -->WOX13(1)  --------->AHL20(2) <---------YAB1   --------->YAB1          <---------At4g35610 -YAB1    =========================HOX2a_HOX2a    <---------ICU4     <---------AtLEC2 <----------DOF2   caacgccattgatctataaattttcatttcctcttatgaatattaattttattcattacaacttcttgtatgcatgagatgacaaacactttttatttct  23354700                                                                                                  <--                                                                                                 <---                                                                                                 ----                                                                                               ------                                                                                            <--------HAHB4                                                                                            ---------                                                                                            <--------                             <------ZmHOX2a(1)                                              ---------                         <---------ANAC46                                      --------->YAB1 -------                         <---------ANAC58                                     <---------YAB1---------                  <---------YAB1                                          <----------DOF2  --------->ICU4     <-----------GT1     <---------ANAC58           ---------->DOF2    <-----------GT1     --------->AHL20(2) --------->YAB1<---------MYB52(1)         --------->GLK1(2)     <---------MYB52(1)--------->YAB1<----   caaaaataaacttctcagttatgttttgcgaggaacaaaacaaaattctgtttttaaagtgaatcggatagtttttctttataatcatattgaataatta  23354800 --------->AHL20(2) ----ZmHOX2a(1) ------YAB1 ------->GT1 --->YAB1                   <---------ATHB12 >YAB1                    --------->WOX13(1) -ICU4                  <---------ATHB12   <---------ARR11(3) >ATHB12               --------->ANAC58    --------->ARR11(3) -->ICU4           --------->ANAC58       --------->YAB1                          --------->YAB1 >ATHB51<-------TEIL   --------->ANAC58 <---------WOX13(1)                     --------->YAB1      <- -----TOE2(3)      --------->ANAC58  <---------YAB1  ----------->GT1    <----------ID1  <---------AHL20(2)   ggataaaatgttcatatagctaagcactcaatcaactatatgaatgatatttaagaagttaatatacacacatagagacaaaaatcatattaaaacccct  23354900                    -------->P                    ------>MYB46(1)                    ------>MYB83                   --------->MYB55(1)                                                             ---                  <---------MYB46(2)                                                         <-------               <-----------GT1  --------->MYB52(1)                                     ----------->HVH21           --------->WOX13(1)  ---------->DOF2           --------->TOE1(3)     <------------CBF  ----         <---------YAB1      --------->MYB46(3)          --------->YAB1  --------->ANAC58    --------       --------->YAB1      <-----------GT1  ---------->DOF2              --------->ANAC58   <--------      --------->ICU4--------->MYB52(1)  --------->YAB1   --------->TOE2(3)  ----------->RAV1(1) ----- --------WOX13(1) <---------MYB59  ----------->GT1 ----------->GT1       --------->ANAC46   ---------   aattgacaattatcaattaacctaccgtttaaccaaagggaaacataaaagagtggtaaccataatcgaacatggaagccacattgtagttgacatatcc  23355000                                                                                   --------->ANAC58                                                                                   --------->ANAC58                                                                              --------->ANAC46                                                                              ----------->RAV1(1)                                                                             --------->MYB46(3)                                                                             <---------MYB55(2)                                                                            ------>MYB83 ------->DOF2     <---------AHL20(2)         <---------ICU4                 *TSS ---------->DOF2 --ARR14(2)       <---------AHL20(1)         --------->YAB1                 ------>MYB46(1) -->ZmHOX2a(1)    --------->AHL20(2)        <---------AHL20(2)            --------->DEAR3(1)     ---- ->ARR14(2)   <---------AHL20(2)        <---------YAB1                    <---------ALFIN1     ------ -CCA1(2)   --------->TOE2(3)           --------->AHL20(2)                --------->AtMYB61    <----- ---->TOE2(3) --------->AHL20(2)        ----------->TBP                  --------->MYB46(3) ------>NtERF2 >GLK1(1) <-------TEIL                --------->YAB1    ---------->DOF2--------->REM1(1)   <---------ETT(2)   taaaggtccaaattcattaattaattcatgaattcatcacttataaataatcactcaccaaagtcatttcccttcaccacccacaaagccatggcgacca  23355100                                                                                             --------                                                                                             <-------                                                                                            <--------                                                                                         <------NtERF2                                                                                        ------>NtERF2                                                                                        --------->MYB52(1)                                                       --------->ANAC46               --------->ZAT18                                                       --------->ANAC58               <---------ABI4(2)                                                 <----------DOF2                      ----------->HVH21                                                <---------ANAC58                    --------->ANAC46                                             <--------P--------->ANAC58           --------->At4g35610                                            <---------ANAC58                  <-----------HVH21             --------->ANAC58               <-------GAMYB                     <-----------TGA1 ----->bZIP60(2)                            <---------ANAC58                <-----------------AGL1 --->AtMYB61 --------->ANAC58              <---------MYB46(3)              <---------At5g28300      < ----ALFIN1  --------->ANAC46   <-----------GT1 <---------ANAC58--------->AtLEC2  <---------At4g35610   cttcatcgacaaaacaagtcattgtcttcacaatttcccttctcttggttgctttccaagcagtccatgcagactattaccgtcagaggccaccggttac  23355200                              ------>MYB46(1)                              ------>MYB83                             <---------ALFIN1                            --------->MYB46(3)                      --------->ANAC46                                ------>MYB83         <---------ANAC58 --------->SPL7                              ------>MYB46(1)      ------>NtERF2      <---------MYB52(1)<---------SPL7                                -------->P        --------->ZAT2 ------>MYB83         --------->ANAC58                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) -------->P           --------->ANAC58                              <---------MYB46(2)  --------->At4g35610 ------>MYB46(1) --------->ANAC58                 --------->ANAC58  <---------MYB111(2) ----------->RAV1(2) ->ARR14(2)      --------->ANAC46                 --------->ANAC58  <---------MYB111(1)--------->ANAC46 --ARR14(2)    ------>ZmHOX2a(1)   <---------ANAC58              --------->AtMYB61    --------->MYB46(3) ---HVH21<---------ANAC58 --------->PCF2        <---------ALFIN1 <---------ALFIN1   <---------REM1(2) ---------ALFIN1 --------->ANAC58  <---------ANAC58             --------->MYB46(3)  -------->P   ccctaccccttacgttcctaagccacggtacccacttccgagcccgagccccaagcctgtttatcgaccacctactacccctagtctacccgctggctca  23355300                                     <---------LBD16                           ------->GAMYB                        ---------->DOF2--------->LBD16                        --------->MYB52(1)                                        ----------->GT1                     --------->ANAC46--------->SPL7                        <---------ANAC46       ---                  ------>ZmHOX2a(2)  <-----------------AGL1       --------->AHL20(2)             <---            --------->TOE2(3)      <---------SPL7  --------->AHL20(2) --------->AHL20(2)      <------            <---------ANAC58      <---------DEAR3(2)              <---------AHL20(2)       <---------YAB1            <---------ANAC58 <----------DOF2       <---------AHL20(2) <---------AHL20(2)<---------TOE2(3)   atcgctagactattccttgatccacataacgctcttcggtccggactaggtatttatttgttagaaatataaatatttagtgtattgtataatgttattg  23355400                                                                           --------->ANAC58                                                                           --------->ANAC55(2)                                                                           --------->ANAC58                                                                           <---------ANAC55(2)                                                                       --------->ZAT2                                                                       <---------At4g35610                                                                       --------->At4g35610                                                                     <---------ZAT18                                          ------>NtERF2              --------->ZAT18                                  <------MYB83                      <---------ANAC58                                  <------MYB46(1)                   <---------ANAC58                <                                 <---------TOE2(3)         --------->At5g28300----------->RAV1(1)   < ------>ATHB12               ------>ZmHOX2a(1)            ----------->GT1  --------->ANAC46 -------->P ------YAB1                ----------------->AG         --------->SPL7 <---------ZAT2 --------->ZAT18 ---YAB1          ------->TEIL   --------->MYB59--------->ATHB12   --------->STY1(2)  <---------ZAT18   ttattggttttgatgaaatgaatttcatttcctattaggtttgcctccattgatttgggacggtaaactagcgagctacgcaacatggtgggctaaccag  23355500                                                                                               <-----                                                                                            ---------                                                                                            <--------                                                                                        <---------DEAR3(1)                                                                               <-----------RAV1(2)                                                             --------->ATERF1(1)   <---------ARR14(2)                                             --------->ARR11(3)               <------NtERF2 <--------               ------>ZmHOX2a(1)     --------->SPL7    --------->LBD16       ----------->RAV1(1)              --------->TOE2(3) <------------------SPL14     <---------At4g35610   --------->ARR14(2)          <---------At4g35610<---------MYB55(2)        <---------LBD16<---------At4g35610   ---------     <---------YAB1          --------->DEAR3(1)       <---------ANAC46--------->ZAT2   <---------LBD16 ---------ANAC58             --------->MYB46(3)       <---------HSFB2a(2)  <---------ZAT18 --------->ALFIN1 ---------ANAC58            --------->DEAR3(2)       <---------LBD16  <---------ZAT2  <---------ANAC46   aggcgttacgactgctccttaacccattccaccggcccatacggtgagaacttgttctggggaagcggctcgagctgggcaccaggtttcgcggtgcagt  23355600  Previous    Next  AGI:  At5g57625.1    Description:  allergen V5/Tpx-1-related family protein. similar to allergen V5/Tpx-1-related family protein [Arabidopsis thaliana] (TAIR:AT4G25790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43309.1); contains InterPro domain Allergen V5/Tpx-1 related; (InterPro:IPR001283); contains InterPro domain SCP-like extracellular (InterPro:IPR014044); contains InterPro domain Ves allergen (InterPro:IPR002413) Range:  from: 23355076    to: 23356033    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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