Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    --------->YAB1                  <---------ICU4                 <---------YAB1               --------->YAB1              <---------YAB1                      <----------DOF2            --------->YAB1                  <------NtERF2                                       -----  <---------AHL20(2)                      <---------DEAR3(1)                       <---------ARR11(3) ------AHL20(2)<---------ICU4          <---------ETT(2)                            --------->ARR11(3) --AHL20(2) <---------ICU4 --------->YAB1<------NtERF2                  --------->TOE2(3)       <---- -YAB1<-----------GT1--------->YAB1 <-----------RAV1(1)   <---------YAB1>>>>>>>>>RAP2.2      <-------   ttatattttttccatcatcatcatcaaaatcaaaacctctgtcgtcgtcgctctttctctattatttcttccaatctaaaatcgaaatctttcttctttt  23342100                              <---------GLK1(1)                                                  ----                           <---------TOE1(2)                                                     <---                          --------->LBD16                                                   <--------                          ------>ZmHOX2a(1)    <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)          --------->LBD16 ---->AHL20(2)          ----------->RAV1(2)   ----------->RAV1(1)                 --------->AtLEC2 -----AHL20(2)   <---------CCA1(2)  <----------DOF2               --------->GLK1(1)       <---------ANAC55(2) ---DOF2 <---------ALFIN1<---------LBD16<---------CCA1(2)         <---------GLK1(1)       --------->ANAC55(2)   aattccaatctccactcttaaatctctcctgggtttctctttatatcccaacaaatttcccaattcagatttcttcttgagtccattcaaacccgtgatt  23342200                                                                                           <---------ANAC46        --------->ANAC58              <-------TEIL                                       <---------ANAC46        --------->ANAC55(2) --------->ARR14(2)    <---------At5g28300                 <----------DOF2        --------->ANAC58    <---------ARR14(2) <-----------HVH21                   <---------ARR11(3)        <---------ANAC55(2)<---------GLK1(1)  <----------DOF2      <---------WOX13(1)------>ZmHOX2a(2) ----->AHL20(2)         <---------TOE1(2)---------->ID1           <------------CBF --------->ARR11(3) ------AHL20(2) <---------AHL20(2)  <---------ARR14(2)   --------->GLK1(2)       <---------YAB1 -MYB52(1)      --------->AHL20(2)  --------->ARR14(2)  <---------GLK1(2)     <---------AHL20(2)<----   tatatagattacgcatttttaaatcgagggtttctgcaaattcgtctcctttcaccgagattctaggtaattgattcaaatttatgatcttttgtgtata  23342300                                                                                            <--------                                                                                          <---------MYB52(1)              --------->ATHB12                                                        <---------At4g35610           <------------CBF                                                    <--------HAHB4        <---------TOE1(2)  ------->TEIL                                        <---------ICU4      <---------ANAC58  --------->ANAC46                                       --------->YAB1      <---------ANAC58  --------->ANAC58                                       --------->ATHB12    --      <---------ANAC46  --------->ANAC58                                ----------->GT1   <---------YAB1 --------CBF<---------WOX13(1)              --------->LBD16 <----------DOF2  --------->GLK1(2)     <-   ttgttgttccttggattgatttgtttacgcatgtctgtgttatctccagataagtgctaatgcttttgtgagaatggagaatcatttcaactgttattgt  23342400                                                                                               ------                                                                                              -------                                                                                              <------                                                                                           <---------ICU4                                                                                           --------->ATHB51                                                                                           <--------HAHB4                                                                                           <--------ATHB1                                                                                           --------->YAB1                                                                                          --------->ICU4                                                                                          --------->AHL20(2)                                                                                          <---------YAB1                                                                                          <---------ATHB51                                                                                        --------->YAB1                                           <------MYB46(1)                             <---------YAB1                                           <------MYB83                              --------->YAB1     --------->AtMYB61                     <---------ANAC58                         <---------YAB1  <    --------->MYB46(3)                     <---------ANAC58                       <----------DOF2   -  --------->ANAC58                        --------->MYB111(1)                <---------ANAC58<-------  --------->ANAC58            <---------TOE1(2)   --------->ARR14(2)         <---------ANAC58-------- ----CBF     ----------->GT1  <---------TOE2(2)   <---------ARR14(2)        --------------->AtSPL3--- ------->At4g35610     <---------YAB1   --------->CCA1(2)                   --------------->AtSPL8<-- --------At4g35610 <------------CBF  <---------TOE2(3)   ---------->DOF2 <---------MYB46(3)-------->HAHB4   cagcaaaccactgccaagttatattgtcatcgtgggtttgagatttggtgcgaaactgagaaagacttatcttggtgattcgtactttgataataattaa  23342500          <---------ARR14(2)    --------->YAB1    <---------ICU4                                   ----------->RAV1(2)   --------->ICU4                                    --------->At4g35610 --------->YAB1                                      <---------At4g35610 <---------ICU4                               <---------ZAT14 --->YAB1 <------------CBF                    --------->ZAT14 -->AHL20(2)                                  <---------ZAT18                                    ---- ---AHL20(2)                               <---------ANAC46                                      <--- ---------YAB1                          <---------ARR14(2)                                     <----- -------->ICU4                          --------->GLK1(2)                                 --------->RAP2.6(2) --YAB1   --------->ARR14(2)            --------->ARR14(2)           <---------ZAT6       --------->RAP2.3(2) ->ICU4--------->YAB1                  <---------GLK1(2)         <---------ZAT14          --------->DEAR3(1) ------>YAB1                         <---------TOE2(3)    --------->ZAT6<---------ANAC46 --------->RAP2.3(1) -------ICU4                        <-----------RAV1(2) <-----------HVH21               --------->At4g35610   taataataatcagattgggagggagattagctatggattcaggttctgtgaactcatctgtcactagtctagtgtcgagtttgaacgatgagccgcatcg  23342600                                           ================================RAV          --------->ALFIN1                 <-----------RAV1(2)     <------MYB83  <------ZmHOX2a(1)        ------>ZmHOX2a(1)   --------->ARR11(3)                     <------MYB46(1) <---------AHL20(2)         <---------ARR14(2)   ----------->GT1   <---------MYB46(3)     <---------ZAT6 ------->GT1                --------->ARR14(2)<------ZmHOX2a(1)   <---------AtMYB61   <---------YAB1 ------ZAT6              ----------->GT1  ------>ZmHOX2a(1)    <-----------RAV1(1)<---------ARR14(2) ----ANAC46   <---------At4g35610    --------->bZIP60(2)  <---------TOE2(3)--------->CCA1(2)   tgttaaattcctgtgtagcttcttagggagtatattgcctcgtcctcaggatgggaaattgaggtatgttggtggagagacgaggattgtgagtgtgaat  23342700                                                                                       ------>ZmHOX2a(2)                                                                                      <------ZmHOX2a(2)                                                                                     <---------ARR14(2)                                                                                     <---------ARR11(3)                                                                                     <---------AGP1               <------ZmHOX2a(1)                                                     --------->ARR14(2)       <------MYB46(1)                                <---------At4g35610            <---------ARR14(3)       <------MYB83                                   --------->At4g35610            --------->ARR14(3)       <---------ANAC55(2)                   --------->YAB1            --------->ZAT2<-----------ARR10      --------->MYB59                       <---------YAB1--------->ALFIN1           --------->ARR11(3)      --------->MYB111(1)               <---------DAG2<---------ZAT2   <---------At4g35610       <---  --------->CCA1(2)                     <----------DOF2   <---------ZAT6             --------->GLK1(2) <---------ARR11(3)          --------->At4g35610      --------->ZAT2   --------->At4g35610     <----- --------->ARR11(3)          <---------At4g35610     ----------->RAV1(1)            <------ZmHOX2a(1)   agagatattaggtatgaggagttgatgagtaagatgagagagctttatgatggtgcagcagtgttgaagtatcagcagcctgatgaggatcttgatgctt  23342800                                                                                         <----------DOF2                                                                                        ------>ZmHOX2a(2)                                                               ================================HOX2a_HOX2a                                                               ===============================HOX2a_HOX2a                      <---------bZIP60(2)                      <------ZmHOX2a(1)        =============                      <---------bZIP60(1)               <------MYB83                    =============                      --------->bZIP60(1)               <------MYB46(1)                ==============                 --------->YAB1                        --------->MYB111(1)             <------ZmHOX2a(2)                <---------YAB1                         --------->MYB46(2)              ==============                --------->ICU4                         --------->MYB59                --------->ARR14(2)         <---------YAB1 ----------->HVH21<------ZmHOX2a(1) <-------TEIL               --------->ARR11(3)       <---------MYB46(3)     <---------ARR14(2)     <---------MYB52(1)               <---------ARR11(3)     <-------GAMYB <---------YAB1<---------YAB1--------->YAB1 --------->LBD16         <---------ARR14(2) ------AtMYB61--------->YAB1  --------->ARR14(2)     <<<<<<<<<MYB98                   <-----------ARR10 -----DOF2   --------->ICU4<---------ANAC46   <---------YAB1<-----------RAV1(2)      <------ZmHOX2a(1)   tggtctcggttgtgaatgatgatgatgtgacgaatatgatggaggagtatgataagttaggttcaggagatgggtttactaggcttaggatctttctgtt  23342900                    --------->MYB52(2)                --------->HSFB2a(1)                <---------MYB46(3)                <------MYB83                <------MYB46(1)                <---------HSFC1(2)                                 --------->CCA1(2)                --------->HSFC1(2)                                --------->ARR11(3)                <---------HSFB2a(1)                               --------->ARR14(2)             <------ZmHOX2a(1)                                    <---------ARR14(2)         <---------ZAT2                                           <---------ARR11(3)         --------->At4g35610                                    ----------->ARR10         --------->ZAT2                   <---------YAB1       =====================================HOX2a_HOX2a      ------>ZmHOX2a(1)              <---------ANAC58  --------->At4g35610                   ------>ZmHOX2a(2)      --------->LBD16<----------DOF2 <---------ANAC58  <---------At4g35610           <---------ICU4    ----------->RAV1(2)              <---------ANAC46 --------->GLK1(2)              <---------AHL20(2) ===================HOX2a_HOX2a    <---------ANAC46   <---------ARR14(2)             <--------ATHB1 ============HOX2a_HOX2a      <---------ANAC46        --------->ARR14(2)             --------->AHL20(2) ===================HOX2a_HOX2a --------->ALFIN1     <---------GLK1(1)               --------->ATHB51 ============HOX2a_HOX2a  <----------DOF2 --------->ICU4       <------ZmHOX2a(1)    --------->ICU4   ttctactcctgagcaggatggttctttgcattatgtggagcgtgatgatcagagggaatctgagaggagatatgttgatgctcttaataatttgatcgaa  23343000  Previous    Next  AGI:  At5g57610.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G16270.1); similar to hypothetical protein OsJ_008352 [Oryza sativa (japonica cultivar-group)] (GB:EAZ24869.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43293.1); similar to hypothetical protein OsI_009022 [Oryza sativa (indica cultivar-group)] (GB:EAY87789.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Octicosapeptide/Phox/Bem1p (Inter Range:  from: 23342533    to: 23346573    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version