Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <---------ANAC46                                                     <---------MYB46(3)                                                     --------->LBD16                                                     ------>NtERF2                                                    <---------ANAC46                                                    <---------DEAR3(1)                                                    --------->ALFIN1                                                   ------>NtERF2                                                   <------NtERF2                                                   --------->ATERF1(1)                                                   <---------LBD16                                                  <---------RAP2.3(1)                                                  <---------RRTF1(1)                                                 <---------RAP2.3(3)                                                 <---------RAP2.6(2)                                                 <---------DEAR3(1)                                                 <---------RAP2.3(2)                                                 <---------RRTF1(3)                                                 <---------RRTF1(2)                                                <---------LBD16                                               <-----------RAV1(1)                                           <---------GLK1(2)  --------->ZAT18   ------>NtERF2          --------->ARR11(3)  <---------ZAT18  --------->WRKY12        <---------ARR11(3) ------>DOF2     <---------At4g35610      <---------RVE1(1) <---------ZAT14                     <---- >GLK1(1) <---------ALFIN1             --------->LBD16<------NtERF2    <------ZmHOX2a(1)        -----   aaagagcacatcccactctcgctgacttcaacattcaatcccagagattttgcggcggggagtgaagaatggaggacagagttggagattgaaataggga  23339600                                                   <---------ARR14(2)                                                   <---------GLK1(2)     <---------ANAC46                         <---------ARR14(2)    --------->ATERF1(1)                       --------->ARR14(2)    <------NtERF2                   --------->ANAC58   ------>NtERF2                    --------->ANAC46  --------->ETT(2)                  --------->ANAC58  <---------DEAR3(1)         <---------HSFB2a(2)   --------->ARR14(2)  ----------->HVH21          --------->HSFB2a(2)--------->YAB1 -----ARR14(2)          --------->ZAT2        --------->GLK1(2)                                  <--- ---->ARR14(2)          <---------ZAT2       <---------GLK1(2)     <---------RAP2.6(3)     <------ZmHOX2a(1)   tttggcgacggagggagagggaatcgagcttggagaagacgaaacgagaatcggaatcggaagggaagccggtctgaataggtttcaaatagaggagttt  23339700                                              <---------ZAT14                                           <---------ANAC46                                           <---------ANAC58                                       <---------ATERF1(1)                                      <---------DEAR3(1)                                     --------->ATERF1(1)                                     <------NtERF2                                    <---------ERF1                                              <----                                    <---------ATERF1(1)                                        ------                                    <---------ORA47(2)                                         ------                                    ------>NtERF2                                              ------                                    <---------DEAR4(2)                                 ------>MYB46(1)                                   <---------RAP2.3(3)                                 ------>MYB83                                   --------->ATERF1(2)                               --------------->AGL15               ================================================MYC_MYB               <---------MYB59               <--------P   ===================================bZIP_DOF             -----------------            <---------TOE2(3)      <---------RAP2.3(2)                              -----------------            <---------TOE1(3)      <---------RAP2.6(2)                              -----------------         <---------REM1(1)  ---------->DOF2<---------ANAC58                         -----------------       --------->At4g35610 <------ZmHOX2a(1)  --------->REM1(2)                  ----------->HVH21  <    <------NtERF2       <------ZmHOX2a(1) ------>NtERF2                        <---------At4g35610  <  <---------ANAC58<---------ANAC58 <---------DEAR3(1)                         <---------MYB46(3)<----  <---------ANAC58<---------ANAC58<---------ABI4(1)  <---------O2         --------->ALFIN1--------->AHL20(2)  <---------ANAC46<---------ANAC46--------->ATERF1(1)<---------TGA1a      <-----------RAV1(1)  ------ <---------LBD16 --------->At4g35610<---------RAP2.3(1)           ------>NtERF2--------->At4g35610<-- --------RAV1(1)--------->MYB111(2)<---------ANAC46--------->CCA1(2)  <---------ZAT14<---------------AGL15   tgtggcggaagatgaaggttgctggaggaggaaagaggcggcgatgcctgtagagacgagggttttgccgagagaagtgttggctgaccaaattaagtag  23339800     <-------GAMYB    <------MYB46(1)                                                                                 <    <------MYB83                                                                  --------->LBD16   <    --------->MYB55(2)                                                           <---------ANAC58   <   --------->ALFIN1                                                              <---------ANAC58   <   <---------AtMYB61                                                             <---------ANAC46   < <---------ANAC58                                                               <---------LBD16  ---- <---------ANAC58                                                       <---------ARR14(2)       <--- <---------ANAC46                                                     --------->LBD16            ---- --MYB46(1)                                                          <---------ANAC46           <---- --->MYB59                                                          <---------LBD16<------NtERF2===== --->MYB111(2)                                                     --------->MYB52(1)          <----- --->MYB111(1)                                              <---------ANAC58    <------NtERF2  <----- >AGL1     <---------ZAT6                                   <---------ANAC46    --------->ATERF1(1)<- >AGL2   <---------ANAC58                                   <---------bZIP60(1)<---------MYB46(3)<--- >AG<---------MYB46(3)                                      <---------ANAC58   ------>NtERF2  <------ >AGL3   <---------ANAC58                                <---------DEAR3(1)   --------->ALFIN1<------ ------MYB83----------->GT1                              --------->ALFIN1     <---------DEAR3(1)<---- ------MYB46(1)      ---------->DOF2                    --------->ATERF1(1)<---------DEAR3(1) <------ --MYB83 <---------ANAC46               --------->ARR14(2) <------NtERF2--------->ARR14(2)  --------- --->MYB46(2)--------->At5g28300     --------->ALFIN1 <---------DEAR3(1)----------->HVH21  --------->ALFIN1 ------P--------->ATHB12----------->GT1 <---------ARR14(2)------>NtERF2<------NtERF2<---------ARR14(2)   gtagggtggttgagtggtaaatggaaaggagaaacagaggtggatttgaatcgaatgcggtggcgtaagtgccggagacggtggcggataagagtggcgg  23339900       --------->YAB1       --------->ATHB12      <---------YAB1    --------->GLK1(1) --------->LBD16 ---------ANAC55(2) ---------ANAC55(1) ---------ANAC58    --------->ALFIN1 ---------ANAC58  <------MYB83             <------NtERF2 ---------ANAC46  <------MYB46(1)         --------->LBD16 ----->ARR14(2)  <---------MYB46(3)      <---------ANAC58 ------ARR14(2)  <---------AtMYB61       <---------ANAC46 ------->HVH21   --------->MYB111(2)    <---------LBD16 ---GAMYB<---------YAB1               --------->ALFIN1 =============================================MYC_MYB ----MYB46(3)    --------->MYB55(2) <---------bZIP60(2) ----DEAR3(2)    --------->MYB111(1)==================================================bZIP_DOF --------LBD16   --------->MYB46(2) <---------TGA1a                                               --- ------MYB52(1) <--------P ----------->HVH21                                                     ---- ---ANAC46      ==============================MYC_MYB             --------->ANAC58              *TSS ---DEAR3(1)    <---------MYB55(1)  <---------O2                  --------->ANAC58             <----- -------HVH21 <------MYB83 <---------YAB1<---------ANAC58<---------ZAT6                <---------AtMYB61 ---RAP2.6(2) <---------MYB46(3)  <---------ZAT14      <---------ANAC46           <---------MYB46(3) --->AtMYB77  <------MYB46(1)     --------->ZAT14     <------ZmHOX2a(1)    ---------->DOF2<---------ANAC46   ttacgggtatcattgttggtaggtgggatgtgatagtgaagtggcggagagagagaggagtgtttagctcgaaactcgaaagagtcgttgtggtttggag  23340000                                                   --------->YAB1                                                  --------->ZAT6                                               ------>ZmHOX2a(1)                                           ------>ZmHOX2a(2)                                          --------->GLK1(1)                                          <------ZmHOX2a(2)                                          <---------GLK1(1)                                         --------->ARR11(3)                                         <---------AGP1                                         <---------ARR14(2)                                         --------->ARR14(2)                                         <---------ARR11(3)                                         <-----------ARR10                                         <---------ARR14(3)                                        <---------CCA1(2)                                       --------->LBD16                          <----------DOF2--------->ARR14(3)                                   <------ ------>At5g28300         <---------DAG2<---------ARR14(1)                                  --------- ------->GT1        <-----------GT1  <---------LBD16                                      <---------- ----ANAC46  ----------->GT1        <---------ANAC46                                ------------>CBF   ggtaaatttggaatctagttatttactacttttttgtctcgcggatctcctaatactaatgggcctggacttagattagtaggctggccaatatttataa  23340100                                                                                                -----                                                                        <---------ICU4          <----                                                                        --------->YAB1          <----                                                                <<<<<<<<<<MYB80                ------                                                     <---------ICU4    <---------ATHB12        <-----                                <---------YAB1      <---------YAB1 --------->AHL20(2)    --------->At5g28300                      ----------->GT1        <---------ICU4    <---------MYB46(3)      --------->ALFIN1                      <----------ID1      --------->YAB1       <------MYB83           <-------PIF5                     ----------->GT1      <---------ICU4       <------MYB46(1)        ------->PIF5                    ----------->GT1  <---------AHL20(2)       <---------TOE2(2)      <---------ANAC58 ---YAB1       <---------AHL20(2)    --------->AHL20(2)       <---------TOE1(2)      <---------ANAC58 >YAB1      ----------->GT1   --------->YAB1<---------YAB1   <---------MYB52(1)     ------->TEIL----- -TBP      ----------->GT1--------->ICU4 <---------ATHB12   <-------GAMYB <---------YAB1----------->GT1   atgttctacttaggtgttaaaatggggaaaaattatcatttaaatcatcatttcatcattttcgttggtttaaatcatgaattatggacgtggtgaatta  23340200                                                 --------->ANAC58                                                 --------->ANAC58                                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                           --------->WRKY45                                   xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)             --------->ANAC58                                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           --------->ANAC58 <-----------GT1          <---------AHL20(2)xxxxxxxxxxxxxxxx>smallRNA(s)          --------->ANAC46 ---->AHL20(2)           --------->AHL20(2)--------->WRKY12          ----------------------->TaNAC69(2) -----AHL20(2)           <---------AHL20(2)--------->WRKY38(1)    <---------GLK1(2) -----AHL20(1)        --------->WOX13(1)   xxxxxxxxxxxxxxxx>smallRNA(s)         <-----------GT1 --->AHL20(2)     <----------DOF2  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   <----------DOF2       ----- ----AHL20(2)  <---------AHL20(2)  <---------GLK1(2)     ---------->DOF2  <---------DAG2    --------- ---->AHL20(1) <-----------GT1    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<-----------GT1 <---------MYB52(1)   aattttctattttctattaactttcaattaaatcacaaattctcgttgactaagccaattgaagcacaaattcttactttttttacgccattagtcgacc  23340300                                      --------->ARR14(2)                                   --------->ATHB12                                      <---------ARR14(2)                <----------ID1    <---------YAB1                                      --------->GLK1(2)             ---------->DOF2  <---------AHL20(2)    <xxxxxxxxxxxxxxxxsmallRNA(i)     <---------GLK1(1)           ------------------------>ANAC81    < ---->TOE2(3) <----------DOF2    ----------->GT1             ---------->DOF2         --------->AHL20(2) >ETT(2)   <-----------GT1 >>>>>>>>>TBF1  --------->LBD16--------->GLK1(2)           <---------AHL20(1)   ttaagacgagaaattactttgtattcgaagaagaagagaaaatccgaagaagatgagagattccaaagaaaaaagaaacaaaatcaaaaaatttgattag  23340400                                                  <---------AHL20(2)                                           <---------ANAC58                                           <---------ANAC58                                          <-------TEIL                                       --------->HSFB2a(1)                                       <---------HSFB2a(1)                                       <---------HSFC1(2)                        <xxxxxxxxxxxxxxxxxxx                                 --------->MYB52(1)                              <xxxxxxxxxxxxxxxxxxx                                <---------WRKY45  --------->AHL20(2)            --------->AHL20(2) xx                 --------->TOE2(3)  ------->GAMYB--------->AHL20(2)          ----------->GT1    <xxxx                 <----------DOF2<---------WRKY38(1)                         ----------->GT1<xxxxxxxxx               ------->TEIL     <---------WRKY12 <---------AHL20(2)        <---------TOE2(3)   <xxxxx <---------ARR11(3)      --------->At4g35610 <---------YAB1      --------->TOE2(3)       xxxxxxxxxxxx --------->ARR11(3)--------->ICU4<---------DOF5.7(2)    ---------->DOF2    <---------TOE1(3) <xxxxxxx ------ZmHOX2a(1)--------------->AGL15 --------->HSFC1(2)  XXXXXXXXXXXXXXXXXXXXX>MIR864-3P<xxxxxxxxxx   aaggatttttaaaaatgtgccttaattagcttagtcaacgaaaattcgtgattaaattgaaagtcaacataaacttgaaggtttaaatcaccaagtccag  23340500  Previous    Next  AGI:  At5g57590.1    Description:  BIO1 (BIOTIN AUXOTROPH 1). similar to acetylornithine aminotransferase, mitochondrial, putative / acetylornithine transaminase, putative / AOTA, putative / ACOAT, putative [Arabidopsis thaliana] (TAIR:AT1G80600.1); similar to Os08g0245400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061354.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ70728.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43284.1); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region (InterPro:IPR015424); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Range:  from: 23335734    to: 23339996    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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