Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->ANAC46                                           ------>ZmHOX2a(2)                                          --------->CCA1(2)                                          <------ZmHOX2a(2)                                         --------->AGP1  --------->ANAC46                                         --------->ARR11(3)                       ------>ZmHOX2a(1) <---------AGP1  --------->ANAC58           <----------DOF2               <---------ARR14(2)                           ---------->DOF2          --------->TOE2(3)              --------->ARR14(2)                      --------->At4g35610        ------->TEIL   ==========================HOX2a_HOX2a             --------->TOE1(3) -------->WOX13(1)     ===========================HOX2a_HOX2a            --------->YAB1             - ->ZAT6 -------->P    <---------ALFIN1  <---------CCA1(2)--------->ANAC58--------->TOE2(3)      <---- -GT1--------->At4g35610  --------->LBD16<---------ARR11(3)  --------->ZAT14   --------->ANAC46------   atccatcatctacctttgcattctcctccccaaaaaaaacctagatctacaaaacacaaacgctacacaattcaatcttaaacagcacaaaagtctataa  23335000                                                                                                <----                                                                                            <--------                                                                                           --------->ANAC46                                                                                           --------->bZIP60(2)                                                                                           --------->TGA1a                                                                                           --------->O2                                                                                           <---------O2                                                                                           <---------TGA1a                                                               --------->ANAC58          <---------ALFIN1       ----------->RAV1(1)             <---------ANAC58        --------->ANAC58         --------->TOE1(2) -------->YAB1                         <---------ANAC58     <---------ATHB12      --------->AtMYB61 -----AHL20(2)                     <----------DOF2    --------->TOE1(3)         >>>>>>>>>MYB2 <------ --->AHL20(2)                      <---------DAG2     --------->TOE2(3) ------->TEIL    --------->TOE2(2)   aatcaaaacccacaaaaacaaactcgagaatgactcgctttacttgaaaacaaaaaccctaaatcaagaaattgaatctgaaaaccaaaacccacgtcgg  23335100                                          --------->MYB46(3)                                          --------->ANAC46                      --------------->AGL15                      <---------------AGL15                     ----------------->AGL3----------->RAV1(1)                     ----------------->AGL1------->GAMYB  <---------ZAT14 ----------->HVH21     --------->MYB52(1) --NtERF2         --------->WRKY38(1) <---------ATHB12             --------------->AtSPL8 ---HVH21     <---------HSFB2a(2)   ------>MYB46(1)               ---------->DOF2            -------- ---DEAR3(1)  --------->HSFB2a(2)   ------>MYB83                 <------ZmHOX2a(1)           <-------   agactacagaagacttctcggtgaccaattgaagaaccaaatcaacgacagagagacataagtaagaggaaagtaccagttaatcggagaccgagaaatc  23335200                             <-------GAMYB                            <---------DEAR3(1)                            <---------ANAC46                          --------->LBD16                         --------->DREB2C(2)                         --------->DEAR3(1)                        --------->DEAR3(2)                        --------->ATERF1(1)         ----------->GT1                        <------NtERF2          <---------YAB1                       ------>NtERF2         --------->ATHB12                       --------->MYB52(1)    <---------ICU4                              --------->ARR11(3)                       <---------ATERF1(1)   --------->YAB1                              <---------ARR11(3)                   --------->ANAC58          <--------ATHB1                         --------->ZAT14                   --------->ANAC58         <---------ATHB12                        <---------ZAT14 ->GLK1(1)         --------->ANAC46         <---------YAB1                    --------->YAB1 --GLK1(1)       ---------->DOF2            --------->ICU4                   <---------YAB1   <------   agagagtgtctcgccgattaaaagccaccggcgttgaattggaacaatgattagtagtgaatagagaattggagttttgatgatagtatagtatctcttt  23335300                                        ------>NtERF2                                       <---------ANAC58                                       <---------ANAC58                                    --------->ALFIN1                                --------->At4g35610                                               <--                              <---------WRKY38(1)                                                 <--                              <---------WRKY12                                                    <--                             --------->WRKY18(1)                                                  ---                             <<<<<<<<<<WRKY11                                <-----------GT1      <--                   ----------->GT1<-----------RAV1(1)          <----------DOF2             <---------TOE1(3)              <---------ARR14(2)<---------At4g35610           <---------ANAC46             <---------TOE2(3)        <------NtERF2       <--------ZAP1          *TSS       <---------ANAC58    --------->At4g35610      <---------DEAR3(1)    <-----------HVH21     <---------At4g35610       <---------AHL20(2)    <-- ----DOF2   <---------TOE1(2)<<<<<<<<<<WRKY6--------->ATHB12  <---------ANAC58    ----------->RAV1(2)   gttttgagtcgtcgcagttttgggttaatcggtcaactgtggcgactcattgagcttctccagtgcttgtagtgggatttaatcacctgtgttaaggttt  23335400                             <---------WOX13(1)                   --------->ZAT18                            <------------CBF                    --------->PCF2                            >>>>>>>>>ARR2                       <---------ZAT18                           --------->YAB1                       <---------PCF5          <---------AHL20(2)>>>>>>>>>ARR1                       <---------TCP15(1)      <---------AHL20(2)   --------->ATHB12                     <---------TCP16(1) -------ANAC46            <---------YAB1                  <---------At4g35610 -------ANAC58<---------ANAC58                       --------->TGA1a -------ANAC55(1)         --------->ICU4----------->GT1   <---------ZAT2 ------>ANAC55(2)     --------->At4g35610            <---------TGA1a -------ANAC55(2)     <---------At4g35610          --------->MYB52(1)                               < -------ANAC58<---------ANAC58  ---------->ID1   <---------MYB52(2)                     --------->ICU4   acgtgtttttattttatcgtggtctgctatgattgtcgtttttagttaaaaactaacgtctgctagggcccactaagagaaacagtggtcattagtcttt  23335500                             <------ZmHOX2a(1)                                         <---------AHL20(1)                     <-------TEIL                                                      --------->AHL20(1)                   <---------ARR14(2)                                                  <---------ARR11(3)                   --------->ARR11(3)                                                  --------->ARR11(3)                   --------->AGP1               <---------TOE1(3)              <-----------GT1                   --------->ARR14(2)       <---------DAG2                    <---------YAB1               --------->LBD16              <----------DOF2                 --------->YAB1              <---------ANAC46            <---------------AGL15             -------->ATHB1            --------->At4g35610           --------------->AGL15             --------->ATHB51            <---------At4g35610          <-----------------AGL1             <--------HAHB4    <------      ------->TEIL <---------ARR11(3)  <-----------GT1     <-----------GT1  <---------ICU4  --------- <---------At4g35610<------ZmHOX2a(2)<----------DOF2   <----------DOF2     <---------YAB1  <--------- --------->At4g35610================HOX2a_HOX2a <---------TOE2(3)          --------->ICU4 <<<<<<<<<<GT-3b ---------TOE1(1) --------->GLK1(1) <---------ICU4     <---------DAG2---------->DOF2<---------GLK1(2)   gtccgatgaatctcagccgtagatccatgtaggactcatctttacactttaaggcaactttttacttcatcaaaagaattattacagaatatttttcttt  23335600                                             <---------ARR11(3)                                             --------->ARR11(3)                                            <---------GLK1(1)                                            --------->GLK1(1)                                   <------MYB83                                       <----------ID1                                   <---------ANAC58                                   ----------->GT1                                   <---------ANAC58                                  ----------------                                   <------MYB46(1)                           ------>ZmHOX2a(2)                             <---------AHL20(1)                             <------ZmHOX2a(2)                             --------->AHL20(2)                            --------->ARR11(3)                             <---------AHL20(2)         <---------ICU4     <---------ARR11(3)                     ------>ZmHOX2a(2)      <---------CCA1(2)              <---------AGP1 ----DOF2          <---------ARR11(3)      <---------MYB52(1) --------->TOE2(3)<---------ANAC46  ---- ->ID1             --------->ARR11(3) <---------SPL7<-----------GT1    <---------MYB52(1)   --------- --GT1        ------->TEIL  --------->AHL20(2)  <----------DOF2  ---------->DOF2 ----------->HVH21   tttgtctattagtatgaaactgatcttgcattaaatttggtgtccgatatctttatactaatttccataaaccgatagatctcgtgaagggaaaaaaaga  23335700                        ------>MYB46(1)                       --------->MYB55(1)                      <---------MYB46(2)                      <---------MYB111(2)                      <---------MYB59                      <---------MYB55(2)                      --------->MYB46(3)                      <---------MYB111(1)                    ------->TEIL                    -------->P                  ------>ZmHOX2a(2)                <---------AGP1                --------->ARR14(2)                                      <-------TEIL                --------->AGP1                                         --------->CCA1(2)       <---------GLK1(1)-------->P                      <---------AHL20(2)  ---------->DOF2<------ZmHOX2a(2)                      --------->AHL20(2)        <----------ID1 -------->ANAC81--------->ARR11(3)        --------->GLK1(2)           --------->ARR14(2) ------>DOF2    <---------ARR11(3)       <---------GLK1(2)            <---------ARR14(2)     -------- ->DOF2--------->GLK1(1)------>MYB83    <---------At4g35610      ----------->RAV1(1)         --------   aaagaaaagaattccatagatctacctaccaatagaaaattcagattccatatgtcattaaaatatgcaacagatacagagatgacaacaaaataagctg  23335800                                                                     --------->At5g28300                                                                     <------NtERF2                                                                    --------->RAP2.6(2)                                                                    ------>NtERF2                                                                   --------->ATERF1(2)                                                                   <---------ATERF1(2)                                                                   <---------DEAR3(1)                                                                =====================================                                                                --------->DEAR3(1)                                                                ------->GAMYB                                                               --------->MYB46(3)                                                               --------->DEAR3(2)                                                              --------->MYB52(1)                                                              =======================================                                                              -------->P                                                           <---------At4g35610                                                           --------->At4g35610         <-------TEIL                                                          --------->ANAC58         --------->ALFIN1<-                                                      <---------ANAC46         ------>NtERF2       --                                                      <---------ANAC58         --------->LBD16     ==                                                     <-------TEIL<---------ATERF1(1)  --------->ALFIN1 ->ZAT2                                  <----------DOF2  --------->ANAC58    <---------LBD16    <--- ->At4g35610                            <---------DAG2<---------ANAC58       <---------LBD16   ------   gagagagagttttgggtttcatgttctattgaattctccgagccttttgtagagcttcgtgagcaaccggcggcaaatttccggcgaggtgcaagggcca  23335900  Previous    Next  AGI:  At5g57580.1    Description:  calmodulin-binding protein. similar to calmodulin-binding protein [Arabidopsis thaliana] (TAIR:AT2G18750.2); similar to calmodulin-binding protein [Arabidopsis thaliana] (TAIR:AT4G25800.2); similar to calmodulin-binding protein [Arabidopsis thaliana] (TAIR:AT4G25800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43283.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16596.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66517.1); contains InterPro domain Calmodulin binding protein-like (InterPro:IPR012416) Range:  from: 23331942    to: 23335351    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g57590.1    Description:  BIO1 (BIOTIN AUXOTROPH 1). similar to acetylornithine aminotransferase, mitochondrial, putative / acetylornithine transaminase, putative / AOTA, putative / ACOAT, putative [Arabidopsis thaliana] (TAIR:AT1G80600.1); similar to Os08g0245400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061354.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ70728.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43284.1); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region (InterPro:IPR015424); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Range:  from: 23335734    to: 23339996    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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