Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   --------->HSFB2a(2)                                                  <<<<<<<<<<<<<<<<<LFY <---------HSFB2a(2)                                            ----------->GT1 -----MYB52(1)                       <---------ANAC46           <---------ANAC58                  --- >MYB52(1)               --------->DAG2                         <---------ANAC46                 <--- -At5g28300             ---------->DOF2 <-------GAMYB           <---------ANAC58     <---------------AGL15 -DOF5.7(2)       ----------->GT1  --------->ALFIN1         <-----------RAV1(2)      --------------->AGL15 --GT1         --------->MYB52(1)<---------ARR14(2)       <-----------HVH21   <--------P         ----   tttctagtactaaacccaaaccgaaaaaaagttcggattgtgggttaaccagtaagtctaggtcaggcgtgaaaacactggtaagaactcatattagtaa  23327200                                                                                            ---------                                                                                  --------->AHL20(2)                                                                                  <---------AHL20(2)        --------->ANAC58                                    ------>ZmHOX2a(1)     <---------YAB1        --------->ANAC58                          <----------ID1                 --------->AHL20(1)   <----------ARF1                                ----------->GT1                --------->AHL20(2)   <----------ID1                               <---------TOE2(3)                <---------AHL20(1) ------>ATHB12                                  <---------TOE1(3)           --------->AHL20(2)      - ------YAB1             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) ---------->DOF2   --------->YAB1      - ----->ICU4    --------->YAB1               <----------DOF2--------->TOE2(3)<---------AHL20(2)      -   tgtttgagacaagacaatgacattggtttttttgatgtctcacaaactttaagggaaaaatcctaaaagagactcaaaataaatataatttggacgttta  23327300                                                           --------->ATHB12                                                           --------->ATHB51                                                           -------->ATHB1                                                       --------->AHL20(2)                                       --------->AHL20(2) <---------AHL20(2)                                       <---------AHL20(2) --------->AHL20(2)                                       <---------AHL20(1) --------->ICU4             <-----------RAV1(1)       --------->AHL20(1) <---------ATHB51      --------->AHL20(1)            --------->YAB1    --------->AHL20(2)      <---------AHL20(1)           --------->AHL20(2) <---------AHL20(2)      <---------ARR11(3)   <---------ARR11(3)      --------->AHL20(1)                        -------- -->GT1  <---------AHL20(2)--------->ARR11(3)      <---------AHL20(1)           --------->TOE2(3) -------->ANAC58          --------->CCA1(1)   --------------->AGL15            --------->ANAC58     < -------->ANAC46          --------->RVE1(1)  <---------ANAC55(2)               ----------->GT1     -- -------->ANAC58      --------->AHL20(2)     --------->ANAC55(2)               --------->ANAC58    --   atacccaatatttttttgttggaaaaaaatatctcaaataataaaatacttaatatataaattattgatagaatcaaactcacgttaatagtcgctaagg  23327400                                                           <---------TOE2(3)                                                           <---------TOE1(3)                                                          <---------At5g28300    <---------ANAC55(2)                                   <---------------------WRI1         --------    --------->ANAC55(2)                     --------->AHL20(1)                         --------->HSFB2a(2)  --------->MYB52(1)                        <---------AHL20(1)                         <---------HSFB2a(2) ->MYB52(1)     <---------TOE2(3)         <---------AHL20(1)                         --------->PCF5 ---------MYB52(2)  ----------->GT1       <---------ARR11(3)                    ===================RAV ------->ANAC58<---------DOF5.7(2)        --------->ARR11(3)                    <-----------RAV1(1) ------->ANAC58<-----------GT1<-----------GT1            <-----------GT1--------->YAB1 <-----------RAV1(2)   gaagtaacgtagccatttaacgtcgttaaatttaaccatttgaatatatattagatgttttacggtttatacaatgatatatatgtggtccagaggttaa  23327500                                                                                             <-------                                                                                             <-------                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                          ------>NtERF2                                                                                         --------->DEAR3(1)                                                                                      <---------ETT(2)                                    ----------->HVH21                                 <---------DEAR3(1)                                  --------->ANAC55(2)                                 --------->DEAR3(1)                                  --------->At4g35610                                <------NtERF2                                  <---------ANAC55(2)                                --------->ATERF1(1)                                  ==========================bZIP_DOF    --------------------->WRI1                                  ----------->RAV1(2)    <---------AHL20(2)         ------>NtERF2                                  <---------At4g35610   --------->AHL20(2)          <---------ATERF1(1)                                  --------->O2          <---------AHL20(1)          <-----------HVH21                                  <---------O2          <---------AHL20(2)         --------->DEAR3(1)                   <---------bZIP60(1)<<<<<<<GRF7   --------->AHL20(2)  <----------DOF2<---------ATERF1(1)                ----------->HVH21 --------->TGA1a   <---------AHL20(2)  *TSS    --------->ANAC46  ---           <---------REM1(2)     ------>NtERF2   <----------DOF2        ============================= ->DOF5.7(2)  --------->ANAC46  <---------ALFIN1<------------------------ANAC81------>ZmHOX2a(1) <---   ctatttccacttctacacatgacaccagggttcgacacctgacaagtttttcttttaatttttttttttttggtctttgtcctcgccgtcgacgacgtcc  23327600     <---------YAB1   <---------At4g35610 --SPL7 ----HVH21                                                                         --------->YAB1 -TGA1a                                                                            <---------ICU4 >bZIP60(2)                                                                       <---------ATHB12 -bZIP60(1)                                                                     --------->WOX13(1) >bZIP60(1)                                                        --------->HSFB2a(2)            --- >TGA1a                                                            <---------HSFB2a(2)  <---------ANAC55(2) ------>LBD16                                        <-----------GT1        ------>ZmHOX2a(2)     <-- =bZIP_DOF                                          <-----------GT1------>ZmHOX2a(1)    --------->ANAC55(2) ------HSFB2a(2)                                <----------DOF2    ================HOX2a_HOX2a   ----   cagagagatgatagcccatgaacaagagcctccaattccaaaatttcaggcttttaaactcttcccctcctagatcgatctccaatcatcacatatcgct  23327700                            --------->GLK1(1)               <---------ICU4           <----------DOF2        --------->WOX13(1) --------->ARR14(2)    --------->bZIP60(2)    <---------ARR14(2)        ------>MYB46(1)----------->GT1    --------->ANAC46       ------->TEIL<---------ICU4------>MYB83  --------->ANAC58  ----------->RAV1(1)      <---------ARR11(1)      <---------MYB59 --------->ANAC58  <---------ALFIN1        <---------CCA1(2)       --------->ANAC55(2)              --------->ANAC58 ------>REM1(1)--------->YAB1       --------->YAB1--------->ANAC46 --------->ANAC46--------->ANAC58 -------ALFIN1<---------ATHB12     <---------ATHB12<---------MYB46(2)              --------->ANAC46 ----->ZAT14--------->WOX13(1)   --------->WOX13(1)<---------MYB111(1)         --------->YAB1--------   acacccacatcattcaatcatagctctcgtatctccaatcatcttttcattcacctaatcttacaataaacgctaaaactctcatacccaatcgcaaaag  23327800                                                                                               ------                                                                                               <-----                                                                                              <------                                                                                              <------                                                                                              ------>NtERF2                                                                                              <------                                                                                              <------                                                                                              <------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                            <------NtERF2                                                                                            ---------                                                                                           <---------DEAR4(2)                                                                                           <---------RRTF1(1)                                                                                           ------>NtERF2                                                                                           <---------RAP2.3(1)                                                                                           <---------ERF1                                                                                        <---------ATERF1(1)                                                                                       <---------WRKY38(1)                                                                                       --------->ETT(2)                                                                                       <---------WRKY12                                                                                       <---------ETT(2)                                                                                       <---------DEAR3(1)                                                                                    <---------MYB46(3)                                                                                   <---------AtMYB61                                                                                 <------MYB46(1)   --                                            <-----------RAV1(1)                  <------MYB83<-------                                     <---------AHL20(2)                         --------->ALFIN1   <-                                  --------->ARR14(2)                            <---------AtMYB61<---                                  <---------ARR14(2)                        --------->LBD16<---------ATERF1(1)                               <---------ANAC55(2)                         <---------LBD16<---------DEAR3(1)                          <---------------AtSPL8                          <---------LBD16 <---------RAP2.3(3)                          <---------------AtSPL3            ------>ZmHOX2a(1)  <--------P--------->ATERF1(1)      >>>>>>>>>TBF1    ---------->DOF2  <---------YAB1 --------->YAB1   <---------ARR14(2)<---------RAP2.3(2) -->DOF2   --------->At4g35610 --------->ANAC55(2)    <---------ATHB12 <----------DOF2 ----------->HVH21   agaatgaagaagaagctccagcgtctaaagagtacggattttataactgtggccaaatcatcctccaattgtgctatccgggatggtggtcgacggcggc  23327900 --->At4g35610 -NtERF2 ---RAP2.3(1) ---DEAR3(2) ---RRTF1(1) ---ATERF1(1) ---ERF1----------->GT1 --RRTF1(3) --RAP2.3(2)                                                                                       <- --DEAR3(1)                                                                                       <-- --RAP2.3(3)                                                                                    <---- >ATERF1(1)                                                                                    ------ ------->STY1(1)              <---------AHL20(2)                                               <----- --RAP2.6(2)                  --------->AHL20(2)                                               ------ --------STY1(1)             --------->AHL20(2)                                                <----- -------DOF2    --------->AHL20(2)     ---------->DOF2   <---------YAB1                       <------ZmHOX2a(1)   tctagggcgaaggaaaaaaaaaattccaaaaattaattccaaaaagactcttgagagtcttgattccccattttccatcttcactgtatttgatgaggat  23328000       <---------DAG2       <----------DOF2     --------------->AGL15     <---------------AGL15   <-----------GT1   ---------->ID1  <-----------GT1 -----------------------ANAC81 -------AHL20(2)                   <---------ARR14(2)                        ---------->DOF2 -----RVE1(1)                      --------->ARR14(2)               <---------AHL20(2) --->ARR14(2)              <-----------RAV1(1)                     --------->AHL20(2) ----ARR11(3)            <---------ANAC58                 ---------->DOF2   <---------AHL20(2)      - --->ARR11(3)            <---------ANAC58     <----------DOF2      <---------AHL20(2)               < ----ARR14(2)          <-----------GT1 <-----------GT1<-----------GT1  <---------ATHB12   <---------At4g35610   tttttttccctttttagttttttttttacttgttgcagatttgactctcttttttttttccaaagacaattaaatcatttaaagggttttgcctctgatg  23328100  Previous    Next  AGI:  At5g57565.1    Description:  protein kinase family protein. similar to CIPK21 (CBL-INTERACTING PROTEIN KINASE 21), kinase [Arabidopsis thaliana] (TAIR:AT5G57630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43314.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 23327572    to: 23328790    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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