Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->ETT(2)                   --------->REM1(2)                <---------ANAC58           <---------TOE2(3)                <---------ANAC46           <---------TOE1(3)            <---------ANAC58         --------->ALFIN1                                               -            <---------ANAC46       <---------ANAC46                                                <-            <---------ANAC58     --------->ZAT14                                                   <-       <----------DOF2        <---------ANAC46            <---------GLK1(1)                        --  ---------->ID1<---------ANAC58 <---------ZAT14   <---------ALFIN1                       <---------TOE1(2) --------DOF2<xxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------GLK1(2)                       <-----------HVH21   ctttgtctcctttgccttgtgtgtagacatttgtgtgaagtgtgtaaggttctccacttgaattccctaaaaactcgaaatctatctcgtcccatgttgt  23325100                                                      --------->YAB1                                                 <----------DOF2                                    -           <---------At4g35610                   <---------DAG2                                    --          <-----------GT1                     <---------ARR11(3)                                ----- <---------At4g35610                     <-------TEIL<---------YAB1                             <---- -------->LBD16                         --------->CCA1(2)                                       ----- --------HSFB2a(2)                     --------->ARR14(2)                                       <---- ----------RAV1(2)                     <---------ARR14(2)         <----------ID1                ----- ------->HSFB2a(2)          <-----------GT1   --------->ARR11(3)  ----------->GT1               <----   tccaggtgatttcaactgttcatatacaaaaaaccatttcagatacaagaactttataatatgcaaaaacgaaaaacagagattgttttgttgaacttac  23325200        ----------->HVH21        <---------YAB1        --------->LBD16   <---------AtLEC2   --------->ALFIN1          <---------LBD16    <---------ANAC46 -------->DAG2          --------->HSFB2a(1)     <---------ANAC58 -------->DOF2          <---------HSFB2a(1)     <---------ANAC58 ---->ANAC58            --------->HSFC1(2)     <<<<<<<<<<FUS3   ------>MYB83 -----ANAC55(2)         <---------HSFC1(2)--------->ATHB12      ------>MYB46(1) ---->ANAC55(2)      --------->LBD16     <-------TEIL         <---------MYB46(2)               <----- -----ANAC46       <---------LBD16   --------->ANAC58      <-----------GT1                     ------ ---->ANAC58       <---------------------WRI1  <<<<<<<<<<ABI3 <---------MYB59               --------- -----ANAC55(1)   ------>ZmHOX2a(1)  --------->ANAC58    <----------DOF2                    <--------   gtaaagtgttgtgactgttcctgcggagtttccagggacaagcttcatttgcatggagactttaccaaacaagtactcgtttttggattggaatccagaa  23325300                                                               --------->ANAC58                                                               --------->ANAC46                                                             --------->AtMYB61                                                             <---------ALFIN1                                                          --------->AtMYB61                                                      --------->ANAC46                                              <---------At4g35610         ------>ZmHOX2a(2)   <------ZmHOX2a(1)         <---------ARR11(3)       --------->MYB46(3) --------->At4g35610 ----ARR14(2)                --------->ARR11(3)    <---------ETT(2)     <---------ARR11(3) --->ARR14(2)      --------->DAG2            <---------AGP1<-----------HVH21                    <---- >HSFB2a(2)       ---------->DOF2            <---------ARR11(3)--------->ANAC58      <----------DOF2 -HSFB2a(2)   <---------ZAT6--------->At4g35610------>ZmHOX2a(2)        --------->ARR11(3)      -----   ccagaggatttatctagagataaagtgagaagctctccattgttcttgatctgtccacgaccatcaccccaagtgatctcaacgtctctttggaaattag  23325400                                                                             <---------YAB1                                                                             --------->GLK1(2)                                                                          --------->ARR11(3)                        ---------->DOF2             ------>ZmHOX2a(2)     <---------ARR11(3)                --------->YAB1            --------->ANAC58                --------->ARR14(2)            --------->ALFIN1              --------->ANAC58    --------->HSFB2a(2)         --------->ALFIN1             --------->ANAC58        <---------HSFB2a(2)        <------ZmHOX2a(1)             --------->ANAC58        <---------HSFC1(1)                 <--- -----At4g35610<---------YAB1       <------ZmHOX2a(1)         --------->HSFC1(1)                 <--- ---->At4g35610--------->ICU4       =======================HOX2a_HOX2a    <---------ARR14(2)   <-----   ctgaaacagaggaggtgatgataagagaaagaaacagaggaagcaagtaagtgatcgccattttctagagattgtagatattcttgtattgagttagatt  23325500                                                                                           --------->SPL7                                                                                    <------MYB83 ----                                                                                    --------->HSFB2a(1)                                                                       <-------TEIL <---------HSFC1(2)                                                                      <---------ARR14(2) <---------SPL7                                                                     <-------GAMYB  --------->HSFC1(2)        *TSS                                                        <---------DEAR3(2)  <---------ANAC58   <---------TOE2(3)                                                <---------MYB46(3)  <---------ANAC46   ---------->ID1                                       <---------RVE1(1)           <------MYB46(1) --------->MYB52(2)             <-----------TBP        --------->ARR11(3)           <---------HSFB2a(1) ---MYB83                      ------->TEIL            <---------ARR11(3)        <------ZmHOX2a(1) ---MYB46(1)                ----------->GT1            <---------GLK1(2)<---------ANAC46<---------ANAC58 ----WOX13(1)            <------ZmHOX2a(1)      <---------ZAT14    <---------DEAR3(1)  <-------TEIL   ggtttgtggtttttgagggtttatggaggaatgtatatatagtaagtgagtgaagaagatttttaagaggcggttcgtatagaggaaggttcgtatggcg  23325600                                  <---------WOX13(1)                                --------->ATHB12                                <---------MYB46(3)                          <---------At4g35610                          --------->ZAT2                          --------->At4g35610                          <---------ZAT2                                    <----------DOF2                        --------->MYB46(3)                                 <---------ANAC58                  <---------TOE2(3)                                        <---------ANAC58         --------->LBD16<-----------RAV1(2)                          --------->ATHB12       <--------         ------>NtERF2----------->RAV1(1)                            <---------AHL20(2)     <--------        --------->RAP2.6(2) <---------MYB46(3)                  <---------AHL20(2)<---------GLK1(1) ------>DOF2  <----------DOF2  <---------YAB1       ---------->DOF2 <---------AHL20(2) --------->ANAC46   aaagaagaagccgcgtctttgaggcaacagctggtgattgggccatcttgtagtaaaagcctgtgttttatttattggctttggaaatcacgcggttttt  23325700                                 <-----------GT1                                <---------YAB1                              --------->YAB1                              -------->HAHB4                              <---------ICU4                              -------->ATHB1                              <--------HAHB4                              --------->ATHB51                             <---------ATHB51                             --------->ICU4                          <---------AHL20(1)                          <---------AHL20(2)             <----------DOF2 <---------YAB1             <---------------AGL15                                <---------ARR14(2)      --------->DAG2             --------------->AGL15         <---------AHL20(2)     --------->ARR14(2)     ---------->DOF2            <-----------------AGL3  <----------DOF2        --------->AHL20(2)      ------>ZmHOX2a(1) --DOF2  <-----------GT1  --------->AHL20(2)               <---------AHL20(2)     --------->TOE2(3) -ARR14(2)  <---------DAG2--------->AHL20(1)              --------->AHL20(2)   <-----------GT1   gtttagtaatgttacctttttttagtaattaattattacttttatttttttggtttcagatttaattggatttgggagttttttcctcagaaaaagttgg  23325800                                  ------>MYB46(1)                                  ------>MYB83                                --------->DREB2C(2)                                --------->DEAR3(1)                         <---------ANAC46                      --------->DREB2C(2)                      --------->DEAR3(1)                                       ----------->GT1                    --------->MYB52(1)                                   <---------ATHB51                  --------->MYB46(3)  ----------->HVH21                  --------->AHL20(2)                <-----------GT1 ----------->HVH21                      ------>MYB83             -----              <----------DOF2   <---------MYB59                        ------>MYB46(1)         ------          <---------GLK1(2)    --------->DEAR3(2)                    <---------MYB59          -------   atttgagagttggattctttaccaccggcttggaccgaccttgacagaggtagagttttagtctaatagaaccaaattattctgttataaaccaaaaaaa  23325900                     ----------->GT1----------->GT1          <---------MYB46(3) --------->AHL20(2)        <--------P  --------->DAG2  --------->YAB1    <---------AHL20(2)      <-----------RAV1(1)    <---------AHL20(2)     <---------CCA1(1)      --------->ALFIN1      <---------AHL20(2)      <---------RVE1(1)  ---------->DOF2  ---------->DOF2 <---------YAB1  <---------ARR11(3)                              <- ---->DAG2<------MYB83  <---------AHL20(2)         --------->ARR11(3)      <-----------GT1<---------YAB1 --->DAG2 <------MYB46(1)   --------->AHL20(2)   <---------TOE2(3)       <---------AHL20(2)    ------ --->DOF2<---------AtMYB61  --------->YAB1  <----------DOF2      ---------->DOF2          --------->ICU4   gggggaaagtgttggtttttaaaaagttaattaaaatatgataaaacttttgagattttttttatctaaaagtatttatacgattttctgacattattca  23326000  Previous    Next  AGI:  At5g57560.1    Description:  TCH4 (TOUCH 4); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase. Identical to Xyloglucan endotransglucosylase/hydrolase protein 22 precursor (XTH22) [Arabidopsis Thaliana] (GB:Q38857;GB:Q8H783); similar to XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6), hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] (TAIR:AT4G25810.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80250.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPro domain Glycoside hydrolase, family 16, active site; (InterPro:IPR008263); contains InterPro domain Xyloglucan endotran Range:  from: 23324356    to: 23325508    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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