Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           <---------AHL20(2)                                                                         --------->AHL20(2)                        --------->AHL20(2)                              <---------AHL20(2)                        --------->YAB1                                  <---------AHL20(1)                     --------->YAB1                                     --------->AHL20(2)         --------->AHL20(2)                                ----------->HVH21            <-------GAMYB         <---------AHL20(2)          ----------->GT1    <---------ARR14(2)        --------->GLK1(2)     <---------YAB1 --------->AHL20(2) <--------P       --------->ARR14(2)       <---------GLK1(2) ->YAB1 --------->AHL20(2) <---------ICU4    ----------->GT1<-----------GT1    <---------TOE2(3)   aactgttctaattaatatccaaataataaaaatttcacatggtaagttagtaacatcgtatatgaccgtctcaaattatttaagaatctctgttgataat  23323200                                                                            <---------YAB1                                                                         <---------MYB52(1)                                                                       --------->ANAC46                                                               <----------DOF2                                                              <---------HSFB2a(1)                                         ---------->DOF2      --------->HSFB2a(1)   --------->RAP2.6(3)                                       <---------TOE2(3)     <---------At4g35610   --------->MYB52(1)                                   ------>ZmHOX2a(1)  --------->ATHB12 --------->ANAC55(1)              <------ZmHOX2a(1)    <----------DOF2   <---------YAB1    --------->ANAC58            ----------->GT1    <-----------GT1   <---------AHL20(2)    --------->ANAC58       <------ZmHOX2a(1)      <-----------GT1    --------->AHL20(2)  <---------ALFIN1  <----------DOF2<---------KAN4(2)--------->TOE2(3)  <---------AHL20(2)--------->ANAC55(2)   ttttctttaggaaataggaaatattcaaaaatttatcctttaagaaagaatttttttaattggagctttccacacgttattctaaaaacggccatgttat  23323300                                                    <---------HSFB2a(1)                                                    --------->HSFB2a(1)                                                    --------->HSFC1(2)                                                  <------NtERF2                                                 --------->LBD16                                                <---------DEAR3(1)                                                <---------ANAC46                                               <---------LBD16                                               <---------------------WRI1                                              --------->LBD16                                              ------>NtERF2                                             <---------RAP2.6(2)                                            <---------LBD16                               --------->LBD16                       <---------TOE2(3)  --------->ARR14(2)                <---------AtLEC2                  --------->ZAT6          <---------ARR14(2)            <---------ZAT2   --------->HSFB2a(2)             --------->ANAC55(2)     ------------>AtMYB77               --------->At4g35610      ----             ----------->GT1        ----------->TGA1<---------HSFC1(2)  <---------At4g35610      <---             <---------ANAC55(2)    ----------->HVH21    <---------LBD16--------->ZAT2   <---------HSFB2a(2)        <---------YAB1--------->MYB52(1)<---------MYB46(3)  ----------->HVH21           <---------LBD16   --------->CCA1(2)<---------MYB52(2)  <---------DEAR3(2)--------->LBD16  <-------TEIL<-----------GT1   atatgatatgatgttaagtaacactaacgtagtaggcagtgacggttccggcggagtttccagggacgagtttgagctgcatgtcgattttcccgaacaa  23323400                                                                                           --------->ANAC58                                                                                           --------->ANAC46                                                                                           --------->ANAC58                                                                          --------->HSFB2a(1)                                      --------->ETT(2)                    <---------HSFC1(2)                                      <---------ETT(2)                    --------->HSFC1(2)                                    <-----------HVH21                     <---------HSFB2a(1)                            --------->ATERF1(1)                          ------->TEIL    <---------ALFIN1                            <------NtERF2                        <---------MYB46(3)      --------->AtMYB61      <---------ANAC58     <---------ATERF1(1)                  <---------MYB52(1)     <-----------HVH21      <---------ANAC58     --------->LBD16                     <-------GAMYB          --------->AtMYB61   <----------DOF2       <---------LBD16                 --------->ARR11(3)       --------->ANAC58 ----->ARR14(2)        --------->ARR14(2)                <---------ARR11(3)       --------->ANAC58 ------ARR14(2)        <---------ARR14(2)               --------->At4g35610       --------->MYB46(3)   atactctttcttggtttgaaaaccagagccggaggctctgtcgagggagagagtgagaagctctccgttgttaagaaccttgccacgaccatcaccccaa  23323500                          ------>ZmHOX2a(1)                         --------->TOE1(2)                     --------->KAN4(2)                    <---------HSFC1(2)                    <---------KAN4(1)                    --------->HSFB2a(1)                    <---------HSFB2a(1)                    --------->KAN4(1)                    --------->HSFC1(2)                                          <---------ZAT6 ------                   <---------TOE1(2)                                   --------->REM1(2)       ------                 <---------SPL7     --------->LBD16                    <---------ZAT14         ------              --------->REM1(2)   <---------LBD16                   <---------ZAT6            -------              <-----------HVH21  --------->MYB52(1)               <---------ANAC58        ---------->DOF2       <---------ARR14(2)--------->TOE2(2)                        <---------ANAC58 --------->CCA1(2)   gtgatatcgaattctgtgtcgaacgttcctgcgaaaaccggagagaagagggtcgtagtcgagacagtgagtgtgaagagtagagataagatgaaagtgg  23323600                                                                       <-----------TBP                                                                     <-----------TBP                                                                <---------ANAC46                                                               <---------ANAC46                                                              <---------MYB46(3)   <-------TEIL                                               <---------LBD16         --------->ANAC58 --->WRKY38(1)                        <---------ATHB12    --------->ALFIN1            --------->ANAC58 --->ZAT18               --------->CCA1(2)     *TSS       <-----------RAV1(1)      <------NtERF2<---- --->WRKY12           <---------YAB1  --------->ICU4<---------DAG2----------->GT1 --------->ANAC58 -->ALFIN1            <---------TOE2(3)    --------->ATHB12  <---------ANAC46     --------->ANAC58<--   accggtccatgtttatgtgtcaataagatagagaattgaaatcattcattgggaccttatgtgttggggggttttatataagggaggcaagtcttagtct  23323700                                                                                     ================                                                                                 <-------MYC2                                                                                 ------->MYC4                                                                                 ------->MYC3                                                                                 <-------PIF4                                                                                 ------->PIF5                                                                                 <-------MYC3                                                  <---------At4g35610            ------->MYC2                                                  --------->ZAT2                 ------->PIF4                                                  --------->At4g35610            <-------PIF5                                                --------->MYB46(3)          --------->ANAC58                                             --------->ZAT14                --------->ANAC58                                             <---------ZAT14            --------->ANAC58      <---------ZAT14                   --------->At4g35610             --------->ANAC58    <-------- ------DOF2        --------->MYB52(2)   <---------At4g35610           ---------->DOF2<----------DOF2 ---------TBP    <---------MYB52(1)<---------ZAT6 <---------ZAT2      ===============================   ttttgtagtatagttcgccgtttgtgactcttgtgtagttttagctgtgaacagctggtttttgttttgaagtaaagcaagcatgtgcttaattttgcct  23323800          <---------ANAC58    ========================bZIP_DOF    <---------ANAC58    <---------ANAC55(2)                            <---------At4g35610    <---------ANAC58                               <-------GAMYB    --------->O2                                 <-----------RAV1(2)    <---------O2 <----------DOF2                <-------TEIL    <---------ANAC46                         --------->LBD16    --------->ANAC55(2)                    <---------LBD16    <---------ANAC55(1)                    ------>ZmHOX2a(2)                --------->GLK1(2)    --------->TGA1a                      <---------ARR14(2)                 <---------ARR14(2)    <---------TGA1a                    ----------->HVH21          <------MYB83 =============bZIP_DOF               ----------------->AGL1       <------MYB46(1)          ---------- ---GT1   <---------ANAC58           ----------->RAV1(2)      --------->ATHB12        <-----------GT1 =============bZIP_DOF  <---------AtMYB61--------->ARR14(2)  --------->ICU4<---------GLK1(2)   <-----   catgctacgtgtgcttgttctttgttttggtttaagtctgcctgatccggttcagttgatgccatgtttggtttagagattctggttttcaccttgttaa  23323900                                                                                               ------                                                                                               <-----                                                                                             --------                                                                                             --------                                                                                         --------->ANAC58                                                                                         --------->ANAC58                                                                                        --------->SPL7                          <---------ARR11(3)                                          <---------SPL7                          --------->ARR11(3)                                         <------MYB83  --                         <---------GLK1(1)                                           <------MYB46(1)                         --------->GLK1(1)                --------->YAB1            <---------------AtSPL3                        --------->ARR11(3)               --------->ICU4             <---------------AtSPL8                        <---------ARR11(3)      <------MYB46(1)                     --------->MYB59--                <---------ZAT18                 <------MYB83 --------->YAB1   --------->YAB1 <------- ->GT1          --------->ZAT18                <---------TOE2(3)              --------->AHL20(2) <--- ----AHL20(2)   <---------ZAT14                --------->MYB59               <<<<<<<<<ARR2 <---------MYB52(1)   attggttcttcataagagtggacaaggatatctcagtcttcaggctaattaggtttgcaaaaatgatactccaaatacaatcaaatttggtacggtagtt  23324000                                                                                    <---------AHL20(2)                                                                                    --------->AHL20(2)                                                                                    <---------AHL20(1) --->ARR14(2)                                                                       --------->AHL20(1) ----ARR14(2)                                                                      --------->AHL20(2) ->MYB52(2)          <------MYB46(1)                                           <---------YAB1 --->ARR10<---------YAB1                                                      --------->AHL20(2)    < ---->NtERF2         <------MYB83 <---------YAB1                              <---------AHL20(2)  <-- ------->LBD16       <---------MYB46(3)                                      --------->YAB1   ------- --MYB46(3)  <---------YAB1      <---------AHL20(2)                          --------->AHL20(2)  <--- ------LBD16<---------AHL20(2)   --------->AHL20(2)                 <---------YAB1 <---------AHL20(2)   ccgccaaactctattattttagttggtttcagtatttttataaaaaataactcaagaatacatatgcaatttgatagaattaaaattaaatttcaataaa  23324100  Previous    Next  AGI:  At5g57550.1    Description:  XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3); hydrolase, acting on glycosyl bonds. Identical to Probable xyloglucan endotransglucosylase/hydrolase protein 25 precursor (XTH25) [Arabidopsis Thaliana] (GB:Q38907;GB:Q9SEB0); similar to XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6), hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] (TAIR:AT4G25810.1); similar to xyloglucan endotransglycosylase XET1 [Asparagus officinalis] (GB:AAF80590.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPro domain Glycoside hydrolase, family 16, active site; (InterPro:IPR008263); contains InterPro domain Range:  from: 23322114    to: 23323647    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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