Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <----------DOF2            --------->TOE2(3)            --------->TOE1(3)        <---------MYB52(1)        <---------ARR14(2)   --------->ARR11(3)       --------->At5g28300   <---------ARR11(3)                           <---------ARR11(3)       <-------GAMYB  --------->LBD16                         <---------TOE2(3)    <---------ATHB12      <---------MYB46(3) ---------->DOF2         --------->DAG2  --------->DOF5.7(2) --------->WOX13(1)    <---------LBD16 <---------LBD16 <---------AtLEC2    --------->ZAT14   --------->ARR11(3)     ----   gcatttcgcggttacctttacctccggtaaagacatttgtatggataacataaggctgtccagtaacgttacccaagaactcgaaatcaatctcatccca  23318400                 <---------At4g35610      <----------DOF2                       <-------TEIL          <---------AHL20(2)     --------------->AGL15      <---------YAB1                    --------->AHL20(2)              ---     <---------DAG2----------->GT1 <---------TOE2(3)             --------->AHL20(2)               <--     <---------------AGL15     --------->YAB1            ----------->RAV1(1)                      --- ----->O2     ---------->DOF2  --------->TOE2(3) <---------ARR11(3)  <---------WOX13(1)          <---   tgtctcaccttttgaagaaagctgttaaaacattcttaatgttagattcaagataaatgccacaatatttaattgaatgagcatataagaagttgtacat  23318500                                --------->LBD16                               <---------LBD16                               <---------ANAC46                               --------->HSFB2a(2)                   <---------ATERF1(2)                   --------->HSFB2a(2)                   <---------RAP2.6(2)                   --------->ATERF1(2)                <---------ARR14(2)                --------->ARR14(2)              <---------DEAR3(2)<---------HSFB2a(2)           ------------>AtMYB77<---------HSFB2a(2)          ----------->TGA1    <---------LBD16          ----------->HVH21 --------->ARR14(2)                         --------->ARR14(2)      --------->ZAT2--------->LBD16                                    <---------ARR14(2)      <---------At4g35610   <---------ARR14(2)                   --------->LBD16              -------      <---------ZAT2------>NtERF2                              --------->HSFB2a(2)            -------      --------->At4g35610<---------GLK1(2)                 ------>ZmHOX2a(2)          <---------WOX13(1) ------>ANAC46<---------MYB46(3)--------->HSFB2a(2)        --------->HSFB2a(1)  <---------ANAC58 -------ANAC55(2)  <---------HSFB2a(2)                   --------->ARR11(3)     <---------ANAC46   <- ------>ANAC55(2) <---------LBD16                        <---------ARR11(3)     <---------ANAC58  --- ----TEIL<-----------HVH21 <---------GLK1(1) <-----------GT1<----------DOF2  <----------DOF2 --------   acgtagtaagctgtgacggttccggcagaatttccgggaacaagttttatcttcatatcgatctttccgaacaaatactctttcttggattgaaaacctg  23318600                                                              <---------At4g35610                                                              --------->At4g35610                                                              <---------ZAT2                        -                                               --------->ARR11(3)                             <------                                               <---------ARR11(3)                             -------       <---------ANAC58                        <---------AHL20(1)                             -------       <---------ANAC58                        --------->AHL20(2)                             <------ --------->LBD16                               <---------AHL20(2)                      <---------ANAC46 -->TOE1(3)                        --------->ZAT18            --------->ZAT2         <-----------HVH21 -->TOE2(3)                        <---------ZAT18      --------->ANAC58          --------->ZAT2  <-- --------LBD16        --------->ANAC58         --------->AHL20(1)                 <---------At4g35610 ---->TEIL            --------->ANAC58        --------->AHL20(2)                  <---------ZAT2 ---- --->RAV1(2)--------->ETT(2)       --------->ZAT14      --------->ANAC58          --------->At4g35610   aaccggatgtcttgtcgagagtgcaagtcaagagttgtccactctcaaatatattagcacgaccagctccccaagtgatatcgaagctgtcgtagaaact  23318700           --------->DEAR3(1)         ------>NtERF2                                             ------>NtERF2       --------->SPL7                                              <---------RAP2.6(3)      <---------ATERF1(1)           --------->MYB46(3)            --------->DEAR3(1)    <------NtERF2                 ----------->RAV1(1)             --------->RAP2.3(2)   ------>NtERF2                  ------>NtERF2                   --------->RAP2.6(2)   <---------ATERF1(1)        --------->ANAC46                    --------->RAP2.3(3)   <---------MYB46(3)       --------->CCA1(2)                    --------->ERF1 <---------MYB52(1)    --------->At4g35610                       --------->RAP2.3(1) -------->LBD16     <------ZmHOX2a(2)                        ---------->DOF2 ---HSFB2a(1)      --------->ARR11(3)                 <------MYB83--------->ANAC46       <-------GAMYB -->HSFC1(2)       <---------ARR11(3)                 <------MYB46(1)                   <-----------RAV1(1) -->HSFB2a(1) <------ZmHOX2a(2)------>NtERF2         <---------AtMYB61            <---------MYB46(3) ---HSFC1(2)  <---------ATHB12--------->ANAC58       --------->MYB59<------NtERF2 <-----------RAV1(1) -------LBD16<xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <---------MYB46(3)         <-------GAMYB  <----- ----->MYB52(1)--------->YAB1 --------->ANAC58     <---------MYB52(1)          <-----------RAV1(1)   tccggtggctacgccgatcaagatcagaagagacgccaacaacaagggagactgtttggtcgcaaaagccgccattttttgctgttgttgctgttgtcgt  23318800                                                      <-----------TBP                                                    <-----------TBP                                                <---------ANAC58                   <---------ANAC58                                                <---------ANAC46                   <---------ANAC58 <                                                <------MYB83               <---------AHL20(2)       <                                                <------MYB46(1)           <---------AHL20(2)        <                                                <---------ANAC58    <---------RVE1(1)               -                                               --------->MYB111(2)  <---------CCA1(1) <---------ZAT14                                               --------->MYB46(2)  --------->ARR11(3) --------->ZAT18                               *TSS  --------->ATHB12 --------->AHL20(2)  --------->AHL20(2)       <- --GAMYB                   <---------YAB1      <---------AtMYB61   <---------ARR11(3) <---------ZAT18   tgttgttgttgttgtctaattgttttctgatgtttgaaatgactggagtttggtgtttatatagagagagatattttttaatagtgagtgcattagagag  23318900                                                                                                    -                                                                          --------->ZAT2  <---------ANAC55(2)      <---------GLK1(1)                                                   <---------At4g35610   -----      --------->GLK1(1)                                                   <---------ZAT2  <---------YAB1 ---------ANAC58                                                          --------->At4g35610  ------ ---------ANAC46                --------->ZAT6                 --------->AHL20(2)   --------->AHL20(2) ---------ANAC58           <---------ZAT6           --------->YAB1    <-----------HVH21   <---------ANAC46 -------->MYB52(2)       <---------ANAC58          <---------YAB1  <---------ICU4  <---------AHL20(2) ------TEIL              <---------ANAC58 <----------DOF2     <---------ATHB12     --------->AHL20(2)   gttcgtggagttccatcatcgacatggtcgtgttacactaggcgattttagttattataaacaaatgaattatgtcagcttacatataaattatgtataa  23319000                                                                                         --------->AtLEC2                                                                                         --------->ANAC58                                                                                         --------->ANAC58                                                                                    <------MYB83                                                                               <---------AHL20(2)                                                                             <---------------AGL15                                                                             <----------DOF2                              <------MYB46(1)                                --------------->AGL15                              <------MYB83                                  <-----------------AGL2                             --------->MYB59                                <-----------------AGL3                            <--------P                                      =========================                    --------->AHL20(2)         <----------DOF2              <-----------------AGL1 ---------->GT1 --------->AHL20(2)      <---------HSFB2a(2)  <---------At4g35610    <------MYB46(1) ---->DAG2     <---------AHL20(2)       --------->HSFB2a(2)  --------->At4g35610   --------->MYB59--- ---->DOF2     --------->AHL20(2)  --------->ICU4  <-----------GT1      ---------->ID1--------->WRKY18(1)   agtcgttaaattcacatataaattatacatgtaggtaatgttttagaaacttttaatcgtttcagcaaaattttgtcttctttatttggtcatgcaattt  23319100                      <---------GLK1(2)            >>>>>>>>>ARR1         ----------->GT1                            <---------DOF5.7(2)          <---------TOE2(3)  --------->ICU4               <------ZmHOX2a(2)--------->DOF5.7(2)     --------->AHL20(2)   <---------YAB1           ---------->DOF2         <---------MYB52(1)     <---------AHL20(2) --------->YAB1           <---------YAB1           --------->TOE2(3) =============================================================MADS_MADS   --------->TOE1(3) ------->ID1>>>>>>>>>ARR2<---------AHL20(2)   <---------------AGL15     ---------->ID1   ggctcaatttataagattgtttcagattataattttgagttaaaaatgcttataaaagcgatcaagtagcatttttcgttaacttgtacaattgcaaaca  23319200                                                                                                -----                                       <---------DDF1                     ----------->RAV1(1)   <----                                      --------->DREB2C(2)       <---------ARR14(2)              -----                          ----------->GT1                      ------>NtERF2                    <----                   <---------TOE1(3)  ----------->HVH21        <------NtERF2                    -----                   --------->MYB59   --------->DEAR3(2)       ----------->HVH21                 -----                   <---------TOE2(3)------->TEIL          <---------RAP2.3(3)  <-------TEIL <--------   aaaaaacttgaaatatttgtttaggttttggtaaaatggaccgacatgtttctgaaattgagggcggacatgttagccacatacatataagaattgtcac  23319300  Previous    Next  AGI:  At5g57530.1    Description:  xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative. Identical to Probable xyloglucan endotransglucosylase/hydrolase protein 12 precursor (XTH12) [Arabidopsis Thaliana] (GB:Q9FKL9); similar to xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative [Arabidopsis thaliana] (TAIR:AT5G57540.1); similar to syringolide-induced protein 19-1-5 [Glycine max] (GB:BAB86890.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPro domain Glycoside Range:  from: 23317547    to: 23318831    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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