Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   ========================HOX2a_HOX2a                 <------ZmHOX2a(2)                 --------->CCA1(2)                --------->ARR11(3)                --------->ARR14(2)  <------ZmHOX2a(2)          <---------At4g35610      --------->ARR11(3)                                           -----          --------->At4g35610      --------->ARR14(2)                            ====================          --------->ZAT2    <---------YAB1     <----------ID1                    <------ZmHOX2a(1)     --------->YAB1    --------->YAB1------>ZmHOX2a(2)                           ====================    <---------YAB1    <---------ATHB12    <---------ZAT6                  <---------AHL20(2)   <-----  --------->YAB1<---------ARR11(3) <---------ARR14(2)                  --------->AHL20(2)     <------ --->ANAC58     <---------ARR14(2) <---------ARR11(3)                 --------->AHL20(2) <---------TOE2(3) --->ANAC46     --------->AGP1     <-----------ARR10              --------->AHL20(2)    ---------->DOF2 --->ANAC58   ----------->ARR10   <------ZmHOX2a(1)     --------->MYB52(1)--------->AHL20(2)  -------   ccatttatcatcagctaagatccaatgaaaattataggatcttagtattacaacaaataaacgaatgaataaataaaaaaataggaacattaaggcgatc  23306400                                                                                                    <                                                                                                  ---           <---------YAB1                                                                         <-- ->ZmHOX2a(2)                                                                                     --- ==HOX2a_HOX2a                                                                                    <-- =HOX2a_HOX2a     <-----------GT1                                 <---------At4g35610       <-------- -ZmHOX2a(2)   <---------ICU4            ---------->DOF2     --------->YAB1                 --------- ---ARR14(2)  <---------YAB1     <---------AHL20(2)          --------->TOE2(3)              <-------- -->ARR14(2)  --------->ICU4 --------->ICU4         ---------->ID1--------->At4g35610     ------->TEIL   tgtagttgaaactctgattattaccctggcaatatttaagttccaaagagatttgtctctcaatcttaagctgtctgtagaaattagctatgaacatctc  23306500 ----------DOF2                 --------->YAB1 ------>ZAT2                    <---------ICU4                                       <-------TEIL -------ZAT2               <---------WOX13(1)                                   <---------LBD16 ------>At4g35610       <---------YAB1                                       <---------ANAC58 -------At4g35610  <---------At4g35610                                       <---------ANAC58 -ARR11(3)         --------->At4g35610                               --------->MYB52(1)            -- >ARR11(3)         ----------->RAV1(2) --------->MYB52(1)           <---------ARR14(2)           ---- ---ARR10   <---------ARR11(3) <---------YAB1          ------->GAMYB--------->ARR14(2) --------->KAN4(2)   agctttgttgtcaatgtcttcatctgaagattgatcataactcacggttctatacaacgctccccttgaagaaccggttgagtccggttcattctctgta  23306600                                                                         <---------SPL7                                                                        <---------DEAR3(2)                                                                       --------------->AtSPL3                                                                   <---------ATHB12                                                                  ------>MYB83   --------->At4g35610                                            ------>MYB46(1)   <---------At4g35610                    --------->CCA1(2)       --------->ANAC58 ------->ANAC46                     ------->GAMYB>>>>>>>>>TBF1    --------->ANAC58  <-----------RAV1(2) ------>DOF2    --------->AGP1   --------->MYB52(1)      <------ZmHOX2a(1) --------->SPL7       -----   aaagccgctgttaaaccaggtctatcgttgaaacttaaccgaagagacgaagaagaagaggaagaaccaagcatcggtacgagaccccagaggctattta  23306700                                                                                   <---------At4g35610                                                                                   --------->At4g35610                                                                              --------->TGA1a  <-----                                                                       =================bZIP_DOF                      <---------DAG2                                   <----------DOF2       --------                      <----------DOF2                           <----------DOF2<-----------HVH21                   <-----------GT1                              ========================bZIP_DOF<----            --------->ANAC58                               --------->DEAR3(2) --------->bZIP60(1)            --------->ANAC46     <---------ANAC58          <---------HSFC1(2) <---------bZIP60(1)            --------->ANAC58     <---------ANAC58          --------->HSFB2a(1)=======================          --------->ZAT6     <---------At5g28300           --------->HSFC1(2) ======================= ---->ARR11(3) ------->TEIL <-----------GT1            <---------MYB52(2) <-----------HVH21  <-------   tcttgaaacttaacacgaattttactttattcactgcttgtctcaaccggtttagtagcgaaccgtctttgctctttgtcatgtcagctatagaatacct  23306800       <----------DOF2 ----DAG2                 <------------CBF                                                    ------- ->ARR11(3)        <------MYB46(1)                                          <---------YAB1   -------- ------DOF2        <------MYB83    <---------ANAC58                       --------->YAB1     <------- =======================MYC_MYB    <---------ANAC46                      <---------YAB1      -------- ======bZIP_DOF   <---------AtMYB61<---------ANAC58                 --------->DAG2          <-------- --ARR11(3)     <-------GAMYB    <---------ANAC46    <---------YAB1---------->DOF2 <-----------TBP   tttgaacttctttttctgcgttggtatggattgttttgtgtgtgagttttgaaatatgtttggaaatgaaaaagtatgatgagtcttatatagacacgga  23306900                  <------NtERF2                  --------->At4g35610               <------NtERF2               <-------GAMYB               <---------At4g35610               ----------->RAV1(2)               --------->At4g35610                                               <---------YAB1              <---------DEAR3(2)                                                <---------AHL20(2)              <---------RAP2.3(1)                                               <---------AHL20(1)             <---------DEAR3(1)                                                 --------->AHL20(2)             <---------At1g77200                                               --------->YAB1             <---------DREB2C(2)                                              <---------YAB1             <---------RAP2.3(3)                                            --------->ATHB51             <---------RAP2.6(2)                                            -------->HAHB4   --------->ANAC58                                                         <---------ICU4   <---------ANAC55(2) <---------DAG2                                       <--------HAHB4   --------->ANAC58  ------>NtERF2                                          <---------AHL20(2)   --------->ANAC55(1) --------------------->WRI1                           -------->ATHB1  <---------LBD16 <---------At4g35610                                       --------->YAB1 ---->GT1   --------->DDF1                                                 <---------ATHB51      ---- ->ANAC58  <-----------HVH21                   <---------TOE2(3)           <---------YAB1      <----- --ANAC55(2)--------->RAP2.6(3)    --------->LBD16                         --------->ICU4   --------- ->ANAC58 =================RAV    --------->ANAC46                      <---------AHL20(2) --------->ARR11(3) -LBD16   <-----------RAV1(1)    <---------LBD16      ----------->GT1   --------->AHL20(2) <---------ARR11(3)   taaacacggataatgtcggctgcagccttatgttctccgcagtttttttaagaaaactgtataacatatagtttttaattattataatgtatagatatac  23307000                                    XXXXXXXXXXXXXXXXXXXX>MIR170                          <---------ANAC55(2)                          <---------ANAC58                          --------->ANAC46<---------ANAC58                          --------->ANAC55(2)<---------ARR11(1)                          <---------ANAC58<---------ANAC46                         --------------->AtSPL8                                                 <----               <---------WOX13(1)  <------------CBF                                             ----- <------ZmHOX2a(1)       <---------------AtSPL3                     <---------ARR11(3)      <-------- ----->TOE1(2)<------------CBF------------>CBF------------>CBF      --------->ARR11(3)<---------AHL20(2) --TEIL<------ZmHOX2a(1) --------------->AtSPL3             <---------ANAC58         <---------AHL20(2) >CCA1(2)    --------->ATHB12------->TEIL <---------ANAC58  <---------ANAC58    <----------DOF2 -----   ataggaataggaaactgattggaagtttacgtaccaatattgaggcgtatcaatatggtatagcgagtgagattttaaaattctttttttattttttcct  23307100                                               <----------TaMYB80                                              ---------->TaMYB80                                              <---------ARR14(2)              <---------ANAC55(1)                       --------->ALFIN1       --------->ARR14(2)              <---------ANAC55(2)                     <---------ANAC58      ----------->GT1                 <---------ARR14(2)         ---------->DOF2                   ------>ZmHOX2a(2)             <---------MYB46(3) -----At4g35610      <---------ANAC46     <------ZmHOX2a(2)        <------ZmHOX2a(2) ->ZmHOX2a(1)     --------->ALFIN1       --------->ARR11(3)       --------->ARR11(3)   --------->ANAC46 ---GT1<---------YAB1<---------ANAC58    <---------ARR11(3)   <-----------GT1 --------->ANAC55(2) ---->At4g35610 <---------O2       --------->ANAC46        <---------AHL20(2) <---------ANAC46 <-----   ctgaatgttataaaagagaagtggggtgcaagtctatacacaagatcgtatattcgagtatataatacgatctagtggttacgagttacaaaccatatag  23307200                                                         <---------SPL7                        <---------------AGL15            --------->LBD16                      <---------At4g35610               --------->DEAR3(1)          --------->AtLEC2                             --------->At4g35610        --------->LBD16          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)   ------>NtERF2       <-------TEIL   --------->At4g35610 --------->AHL20(2)                     <---------HSFB2a(2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------AHL20(2)     --------->AHL20(2)        --------->ANAC46 ----TOE2(3)<---------AtLEC2   <---------ANAC46        <---------LBD16           --------->HSFB2a(2)<   gttttgaggtccatgcatgggttgagctaaattgagtatgacatttaaaaatttagcaccggaccaataacatattcaaaactccagaaattgacgcctc  23307300  Previous    Next  AGI:  At5g57510.1    Description:  unknown protein Range:  from: 23306390    to: 23306782    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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