Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 <---------ANAC58    <---------ANAC58                                                           <---------ANAC58    <---------ANAC46                                                           <---------ANAC46    <---------ANAC58                         --------->WOX13(1) --------->ANAC58 >DOF2            --------->ZAT14--------->AtMYB61              --------->ANAC58          <------ZmHOX2a(2)   tcaattgcttatagctacagttctctaattccaaaccaaaactatgtcaatctatctatagaatcgaagcaaacacaaatggcgagaaacagatcgaatc  23302800            --------->ARR14(2)                                        <---------HSFB2a(2)            <---------ARR14(2)                                        --------->LBD16           <---------CCA1(2)                                          --------->HSFB2a(2)          --      --------->ANAC58                                           --------->At4g35610              ---      <----------ID1                            --------->YAB1   <---------At4g35610        <--------      --------->ANAC58                        ------->TEIL       <---------ZAT2         <---------MYB52(2)     --------->DAG2                   <---------ZAT18            --------->ZAT2       <---------ARR11(3)    ---------->DOF2                   --------->ZAT18 <---------ARR11(3)    >>>>>>>>>TBF1 --------->MYB52(1)   gatcgaaaaagccaaatctccagactaattcaaaaactagtccacatgaatcacaatatcccatctcagctccgagaagaagaaccaagaactaacgaca  23302900                  --------->ANAC58                  --------->ANAC58             --------->ARR14(2)      <-------TEIL               ------>ZmHOX2a(1)               <---------ARR14(2)   --------->HSFC1(2)               =======================HOX2a_HOX2a                   --------->HSFB2a(1)           --------->GLK1(2)                 ------->GAMYB          <---------HSFC1(2)          <---------ARR14(2)                --------->ANAC58        <---------HSFB2a(1)          --------->KAN4(2)                 --------->ANAC58        --------->At4g35610             <          <---------GLK1(2)                 --------->ANAC46        <---------At4g35610             <         --------->HSFC1(2)               --------->MYB52(1)        --------->ZAT2        --------->ARR14(2)         <---------HSFC1(2)    <---------------------WRI1       --------->ANAC46          --------->ARR11(3)         --------->HSFB2a(1)   <------ZmHOX2a(2)              --------->MYB52(1)          <---------ARR14(2)         <---------HSFB2a(1)  --------->ARR14(2)            --------->YAB1              ----------->ARR10      ================================HOX2a_HOX2a          <---------ATHB12          --------->TOE2(3) ------->DAG2 <---------ANAC58<---------ARR14(2)           <<<<<<<<<ARR2 <-----------HVH21<---------ARR11(3) ------->DOF2 <---------ANAC58--------->ARR11(3)         --------->WOX13(1)          --------->TOE1(2) --ID1<------ZmHOX2a(1)       <---------ARR11(3)      --------->YAB1<---------ZAT2   --------->TOE2(2)   aaaagagaggaagattccttacgaaaatggaagatcgacgaatacaacggaaccgataacaatcaaacggagcttcgtcggacaaaacctaagatactgc  23303000                                 --------->At4g35610                                 <-------GAMYB                                 <---------At4g35610                                 <------NtERF2                                <---------DEAR3(2)                                ------>NtERF2                                <---------RAP2.3(1)                                <---------MYB46(3)                                <---------ATERF1(1)                                <---------ERF1                               <---------RAP2.3(3)                               <---------RAP2.6(2)                               <---------RAP2.3(2)                               <---------DEAR3(1)                              --------->ATERF1(1)                              <------NtERF2                             <---------ERF1                             <---------DEAR4(2)                             <---------RRTF1(1)                             ------>NtERF2                             <---------ATERF1(1)                             <---------RAP2.3(1)                            <---------RAP2.3(2)                            <---------O2                            --------->O2                           --------->ATERF1(1)                           <------NtERF2                          ------>NtERF2                          <---------ATERF1(1)                         <---------DEAR3(1)                         --------->DEAR3(1)                         ----------->HVH21            <---------ATHB51<---------DEAR3(1)     <------NtERF2      --------->ATERF1(1)    ------>NtERF2      --------->LBD16   --------->DEAR3(1)  <---------ATERF1(1)      --------->ZAT6             ---------->DOF2         -- <-----------HVH21   <---------LBD16         --------->ZAT14            <---------TOE2(3)     ------- ---------ANAC58   <---------ARR14(2)      --------->At5g28300 --------->At5g28300   --------->HSFB2a(2) ---------ANAC58   --------->ARR14(2)     ----------->GT1     ----------->GT1        <---------HSFB2a(2)   ttccgtcgccttcgataatggaatccggcgacggcggctgaagacagtaaacactactatttagcagtaaaattaagaaaagagcctcgagaaactcaaa  23303100                                                --------->ANAC55(2) <------MYB46(1)                                                <---------O2        <------MYB83                                                <---------ANAC55(2)--------->MYB46(2)                                                <---------TGA1a   <---------MYB55(1)                                                --------->O2   --------->MYB52(2)                                                ==============MYC_MYB    --------->ANAC58                                                =======================================bZIP_DOF                    ------->GAMYB           <-----------HVH21  <---------MYB46(3)<----------DOF2                    ======================================MYC_MYB<---------MYB52(1)                  ------>MYB46(1)        <---------ICU4       <-------TEIL  <----------DOF2                  ------>MYB83        --------->YAB1        *TSS<-------GAMYB    <---------DAG2    <------ZmHOX2a(1)                 -------->HAHB4  <-------GAMYB--------->MYB59              ----- ------->ALFIN1  --------->MYB52(1)  <---------YAB1  <---------ANAC46<-----------HVH21  <-----------GT1 --->DOF2       --------->AtMYB61    --------->ICU4  <---------MYB46(3)  --------->ANAC58  <---------YAB1   ggtgaaggagaagagagaccaacgctctcgatgagagtaatgataatgtcacttgtcgttgatgttcgttaggtcacgctttactttttttttctgatta  23303200                                                                                       <------NtERF2                                                                                      ------>NtERF2                                                                                      <---------ATERF1(1)                                                                                      <---------RAP2.6(3)                                                                                     --------->RAP2.6(2)                                                                                     --------->DEAR3(1)                                                 ----------->GT1                     --------->RAP2.3(2)                                            ---------->DOF2                          --------->RAP2.3(3)                                           <---------WRKY12                         --------->RAP2.3(1)                                           <---------WRKY45                        --------->ZAT2                                   <-----------HVH21        <---------ANAC58      --------->ANAC58                                  --------->bZIP60(1)  --------->AHL20(2)         --------->ANAC46<--                                  <---------bZIP60(1)  <---------AHL20(2)  --------->ANAC46 <--------   <----------DOF2          <-----------GT1<---------WRKY38(1)    ------>NtERF2   --------->ANAC58--- ----->DOF2          <-----------HVH21   <-----------HVH21  <---------ANAC58    <---------ALFIN1<----   aagggcttttttgtttattcgtctgtcatttaacttatgtcacagtcaaagctgtatataattcgtgaggcccattcactccccaagccgccttcttttc  23303300                                   ------->TEIL                                <---------ANAC46    <---------AHL20(2)        <------MYB46(1)    --------->AHL20(2)       <---------AtMYB61 -------At4g35610    --------->ANAC46                                <---------ATHB12 --DOF2       --------------->AtSPL8  ----------->HVH21  --------->TOE1(3)                <---------- -------->RAV1(2) ------->TEIL<------MYB83               --------->TOE2(3)                ------->TEIL -------GT1<---------YAB1 <-----------RAV1(1)         <-----------GT1--------->ICU4    ----------->GT1   acctgtttaaatgactattgtacccctaatgttggtgtatgtgacaaaatttgattttaccttcatgtctaatgagtagtttaagtgtaatgtaactata  23303400                                                                      ----------->RAV1(1)                                                                      ------>NtERF2                                                          <---------YAB1                                           <---------ANAC58          --------->ANAC46                                           <---------ANAC46          <---------ALFIN1                                           <---------ANAC58--------->YAB1   <---------WOX13(1)             ---------->DOF2         ------->TEIL--------->ZAT18  --------->ANAC46              <---- -GT1  ----------->RAV1(1)     <---------ARR14(2)<---------ZAT18<-----------GT1     --------->AHL20(2)   gaagatggacaacaaaaaagaccaaaaattgtagatttgaacgttgcttagtgggctactatgaaaaaaccccaccagattgactattaaacatgtttga  23303500             <---------ZAT14             --------->ZAT14             <---------ZAT18             --------->ZAT18           <---------------AtSPL8    ------>ZmHOX2a(1)                         ---------->DOF2   --------->TOE2(3)                        <---------YAB1 <-----------GT1                          -   --------->TOE1(3)                      <--------HAHB4 <---------ANAC58            ----------->GT1< -------GT1--------------->AtSPL8        --------->ICU4  <---------ANAC58          ---------->DOF2  -   acaatccttaattagtgtactacaaatccctcccaaaaaatcgattattaaagaacatttcttaccaatttcaagagaaacaatgtaaagtataaatata  23303600          --------->ANAC58          --------->ANAC58                                                                     ------        ---------->DOF2                                                                        <-----     --------->At5g28300                                                                    ---------    --------->LBD16                                                                         <--------    ----------->GT1                                              <---------ANAC58          <-------TEIL  <---------LBD16                <---------MYB52(1)              <---------ANAC58          ------->TEIL -------->GLK1(2)              --------->ANAC46               <---------WOX13(1)       <------------- ---------ARR14(2)            <---------LBD16          <---------ANAC58               --------------- -------->ARR14(2) ---------->DOF2     <---------ANAC46<---------ANAC58     --------->AHL20(2) ------   agaatccggtaaaagcaaacaaaaagactatctacggtatgtggtatagtttagaaggcttgagattgctagtaacattgaaatagttcaatgtacgtat  23303700  Previous    Next  AGI:  At5g57490.1    Description:  porin, putative. similar to porin, putative [Arabidopsis thaliana] (TAIR:AT5G67500.1); similar to porin, putative / voltage-dependent anion-selective channel protein, putative [Arabidopsis thaliana] (TAIR:AT5G15090.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96634.1); contains InterPro domain Porin, eukaryotic type; (InterPro:IPR001925) Range:  from: 23300906    to: 23303160    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g57500.1    Description:  transferase, transferring glycosyl groups. similar to galactosyltransferase family protein [Arabidopsis thaliana] (TAIR:AT3G06440.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80704.1); contains InterPro domain Glycosyl transferase, family 31; (InterPro:IPR002659) Range:  from: 23303463    to: 23304797    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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