Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------AHL20(2)                             <---------AHL20(2)                         <----------DOF2                                                           --                         <---------DAG2                          <-----------GT1               ------                   --------->ANAC58                 --------->LBD16                           <------                   --------->ANAC55(1)        <---------ICU4 <---------DAG2                 ---------                   --------->ANAC46      <---------MYB52(1)  <----------DOF2              <---------ATHB12                   --------->ANAC58     <-------GAMYB     <-----------GT1            <---------ZAT6<-   tctatatgtgactcacaatagacgcaacttttttaatgactccgttattcattccgaattttacttttcacattccttcatttcatagtgtaatcaatca  23280000                      <---------YAB1                    --------------->AGL15                    <---------------AGL15                   ==================================================================================        <-----------GT1--------->YAB1        --------->WOX13(1)                                                             <---------AHL20(2)       <---------AHL20(2)                                                      --------->MYB52(1)       --------->AHL20(2)                                                   --------->ANAC55(2)      --------->AHL20(2)                                                    --------->ANAC55(1) --------->TOE2(3) <-----------------AGL3                                   --------->ANAC46       -- ------->GLK1(2)  ------>MYB46(1)                                           --------->ANAC58       <- --->YAB1  --------->YAB1                                                   --------->ANAC58       <- ---ATHB12 <---------ICU4                                                  <---------TOE2(3)      --- >WOX13(1)<---------ATHB12           <---------WRKY18(1)                --------->CCA1(2)      <----- --------ARR11(3) ------>MYB83      ----------->HVH21 ----------->GT1  >>>>>>>>>GATA-1 --------->AHL20(2)   aaatctaaattaatcataccaactattataggttagacttgacctctctatctatcttgtgaaatctccaatagataaacgtaacgttttaaattagtta  23280100                                                   --------->GLK1(2)                                                  --------->ARR14(2)                                                  <---------ARR14(2)                                                  <---------ARR11(3)                                                  --------->ARR11(3)                                                  <---------GLK1(2)                                                 <---------HSFC1(2)                                                 <---------HSFB2a(1)              <------NtERF2                                                 --------->HSFC1(2)              --------->LBD16 ==============MADS_MADS                  <----------DOF2                       --------->LBD16 ------------->AGL15                 --------->ARR11(3)                   <---------ARR14(2) ---------DOF2                       <---------ARR11(3)                   --------->ARR14(2) --------------AGL15                --------->RVE1(1)               --------->TOE2(3) ------>TOE2(3)                     --------->CCA1(1)           ---------->DOF2<---------LBD16      - ------GT1   <----------DOF2--------->HSFB2a(2)  --------->HSFB2a(1)--------->TOE1(3)        --------   cctttattaagcatgctttggctcgaccatctagagaaatatctctttcgaagattcttccatctccaaagcttaatattcgccggaaatagagaatgtt  23280200                                                                                                  <--                                                                                                -----                                                                                             --------                                                                                             <------NtERF2                                                               <------ZmHOX2a(1)            <--------                                                            <------ZmHOX2a(1)              <---------ANAC46                                                         <------NtERF2                     <---------DEAR3(1)                                                        --------->LBD16                   <---------LBD16     <---------GLK1(1)                                <---------LBD16                    --------->LBD16   <---------GLK1(2)            --------->LBD16     --------->ANAC58          --------->HSFB2a(1)<--- -------->YAB1                <-----------RAV1(2)   --------->ANAC58         ------->TEIL------>NtERF2 --->GT1     ------>NtERF2   <-------TEIL      ----------->ARR10         --------->SPL7<---------LBD16   tattagaatttccgacgactgagactgagggttcagggaaaccaaggctgagaaacgccggaggaggagtaatcggacgaacgttttcttccggcggagg  23280300                         <---------ALFIN1                    --------->At4g35610                    <---------At4g35610                   ------->TEIL                  --------->REM1(1)                                                          <-------                 <------NtERF2                                                              <--------              --------->ZAT2                                                                ---------              --------->At4g35610                                                       --------->HSFC1(2)   ------>ZmHOX2a(2)<---------GLK1(1)                                                   <---------HSFC1(2) ------P      <---------ZAT2                --------->ATHB12     --------->YAB1         --------->HSFB2a(1) ------>GT1  --------->LBD16              ------>ZmHOX2a(1)   --------->YAB1            <---------HSFB2a(1) ->ATERF1(1) ------>NtERF2           --------->GLK1(1)       <---------YAB1     --------->HSFB2a(2) -SPL7      --------->LBD16          <---------GLK1(1)     --------->YAB1       <---------HSFB2a(2) ----GAMYB <---------LBD16     ---------->DOF2            --------->ICU4     --------->GLK1(2)  -----   gttgatcggtgttcccggctgcatctcccacttaaaaggaactccttcattgagactacgatgatgatagtaatagaacaatctagaagaaactcccacc  23280400                                                      <---------ICU4                                                      --------->YAB1                                                   --------->YAB1                                                  --------->ZAT6                   <---------GLK1(2)             ------------>CBF             <---------GLK1(1)                   <---------TOE2(3)             --------->GLK1(1)        --------->KAN4(2)    ------->TEIL --ALFIN1    <------ZmHOX2a(2)      <------ZmHOX2a(2)<---------ATHB51 -MYB55(2)  --------->ARR11(3)     --------->ARR11(3)--------->ICU4 >MYB46(3)  <---------ARR11(3)<---------AtLEC2  --------->YAB1<----------DOF2                    <--- ---->DEAR3(1)------>ZmHOX2a(2)    <---------ARR11(3)<---------ATHB12<------------CBF--------->YAB1   gatgagcttcttgagatctctgattctctcttgcatagatcattctccattaacaataatgaagcttttggtattggagttatgttatcgtattcttgat  23280500                                       <---------ANAC46                                       <---------ANAC58                                       <---------ANAC58                                      <-------TEIL                                     --------->CCA1(2)                                    <---------ARR14(2)                                    --------->ARR14(2)                                    <---------GLK1(2)                                    --------->ARR11(1)                                   <---------HSFB2a(1)                                  <---------AHL20(2)                                   --------->HSFB2a(1)                                <---------AHL20(2)                                   <---------HSFC1(2)                        ------->TEIL   <--------                                   --------->HSFC1(2)                <---------ARR14(2)<---------AHL20(1)          --------->MYB52(2)      ----------->ARR10                  --------->ARR14(2)--------->AHL20(1) ----TEIL<-------TEIL    ---------->DOF2 <---------MYB52(1)      <---------ZAT18    <-----------TBP   tcatggtgatgttcgtttgagagaagagaaagagagaagattcgtgagttatggagacgatgtatagtgcaaatatgtgtatgtgtatatatattttata  23280600                           <------------CBF                       --------->LBD16                      --------->LBD16                      <------NtERF2                     <---------AHL20(2)           --------->TOE2(3)                     <---------LBD16                   --------->AHL20(2)          ------->TEIL                     --------->LBD16              <---------WOX13(1)      >>>>>>>>>WRKY6               <---------ANAC58           ----------->GT1   <---------MYB46(3)    <---------CCA1(2)               <---------ANAC58<---------ANAC58  <------------CBF       --------->WRKY38(1)             --------->GLK1(2) <---------ANAC58<---------YAB1           --------->WRKY12            <  ---------->DOF2   <---------LBD16   --------->ICU4--------->ATHB12    --------->ZAT18    --------->ANAC58 -AHL20(2)  <---------GLK1(2)  <---------ANAC46<---------AHL20(2)       --------->WRKY45   --------->ANAC58   catggaaagagagagattcttgcccgggaaattgggtgtaagaatggatataattgatttaatggttagaagagttgactatgtgaatcttagacgcata  23280700                                                         ---------->DOF2                                                        --------->AHL20(2)                                                       <---------YAB1                                                     <--------HAHB4                                                     -------->HAHB4                                                     <---------ICU4                                                     --------->ATHB51                                                     <--------ATHB1                                                     --------->YAB1                               <---------ANAC58     --------->AHL20(2)                               <---------ANAC58     <---------YAB1                               <---------ANAC46     --------->ICU4                             --------->ARR11(3)     <---------ATHB51                          --------->YAB1          --------->YAB1                          <---------ICU4         <---------AHL20(2)                         --------->ICU4         --------->AHL20(2)     ----------->GT1   --------->YAB1         <---------AHL20(2)           <---------------AtSPL8     <---------ANAC46 <---------YAB1         --------->AHL20(2)      <----------DOF2     <----------DOF2   <---------ANAC46 --------->YAB1          <---------YAB1           --------------->AGL15 -----------RAV1(1)<---------YAB1         <---------ZAT6<---------AHL20(2) --------------->AtSPL8   atgtgttgtgtaatacatgttttgataataatgtcttgttcatagtattatataataattaaagggtttgactttatattgtacatacaaactttatttc  23280800                 --------->YAB1                <---------YAB1              --------->YAB1              <---------ICU4             --------->ICU4          --------->AHL20(1)          --------->AHL20(2)          <---------AHL20(2)                               <---------ICU4                     <------         <---------AHL20(2)                                --------->ATHB12                   -------         --------->AHL20(2)                               --------->ICU4                <------ZmHOX2a(2)      --------->YAB1                                      <---------ATHB12             --------->ARR11(3)     <---------YAB1      --------->TOE2(3)                <---------YAB1               <---------ARR11(3)     --------->ICU4<---------YAB1                        <---------TOE2(3)     <---------WOX13(1)   tctcgttataattaaattatgataatacatcaaaatttatccaaaatagtttttagtttaatgatttcatcgatttagttgatggataagatcgatttat  23280900  Previous    Next  AGI:  At5g57400.1    Description:  unknown protein Range:  from: 23280048    to: 23280443    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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