Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                             --------                                                                                             <-------             <---------At4g35610                                                            ------>MYB46(1)            ==================HOX2a_HOX2a                                                   ------>MYB83      <---------ATERF1(1)                                                                 ------->GAMYB   --------->LBD16                                                                        --------->AtMYB61 ------>At4g35610            --------->ZAT18                                          --------->REM1(1) -------At4g35610      ------>ZmHOX2a(2)                            --------->ANAC46  --------->MYB46(3) -->GLK1(2) ------>ZmHOX2a(1)<---------ZAT18            --------->YAB1              ------>ZmHOX2a(1)   tgctcccgagcctcctgcttactgatcgtagtgccatagctctcaatagaaacagaaattatagtcgtctactccaaactctgttcctacaaccaaatcc  23227900                                                                                                    <                                                                                                    -                                                                                                    <                      --------->bZIP60(2)                                                           -                    <---------ALFIN1  --------->ICU4                                               <-             <-------GAMYB       ------>MYB83                                                    <--- ------>ANAC46     <---------ZAT18  ---------->DOF2                     --------->YAB1          ----- ->ARR14(2) ----------->GT1      ------>MYB46(1)                       <---------ATHB12       ------- --ARR14(2) <---------MYB46(3) <---------MYB111(1)   <----------ID1  --------->WOX13(1)      --------   ccacaaattttagatggttagaccacttcatcacctactaaagattaaaacagagaagacaaaaaatgttccaatcacatcaaaattttcagaaaataaa  23228000                                                                                                  ---                                                                                                <----                                                                                             --------                                                                                         --------->DEAR4(1)                                                                                         ------->GAMYB                                                                                         --------->MYB46(3)                                                                                         --------->DREB2C(2)      <-------GAMYB                                                                      --------->DEAR3(1)     <---------ANAC46                                                                   --------->DEAR3(2) ---------AHL20(2)                                                                   --------->MYB46(3) -------->AHL20(2)                                ------->TEIL                      <<<<<<<<<GATA-4 ---------ICU4                                 <---------YAB1          --------->At4g35610 ------>MYB46(1) -------->ATHB51                             --------->YAB1      <----------DOF2    <<<<<<<<<GATA-2 --------AHL20(2)                            <---------ICU4   --------->ARR11(3)    <<<<<<<<<GATA-3 ------ICU4                                 --------->ICU4    --------->GLK1(2)     <<<<<<<<<GATA-1 - ---->ICU4                               <------ZmHOX2a(1)    <---------ARR11(3)   --------->ARR14(2) -->YAB1                             --------->MYB52(1)   >>>>>>>>>TBF1<---------At4g35610 ------>MYB83 ->AHL20(2)   <-------TEIL   <-----------GT1<---------ATHB12 <---------GLK1(2)     ------->TEIL------   aattatttcgttgagattcaaagtttttttttttctaactacaggaatcatgaaactgaagaagaatcttttgagctgttctatgaatccaccgactcac  23228100                                                                                        ------------>CBF                                                                                 --------->ANAC58                               --------->TOE1(3)                            <---------TOE2(3) ------>LBD16                  --------->TOE2(3)                           <-----------GT1 -----LBD16                 -------->P                               --------->LBD16   --------->YAB1 --->HVH21            <---------AHL20(2)                      <---------ZAT18    --------->ANAC58 --------->DOF2      --------->AHL20(2)                       --------->ZAT14  ---------->DOF2  <---- --->MYB52(1)        <---------AHL20(2)                    ----------->GT1 --------->MYB52(1)--------   cggaaaggaaaccgagaccctaatttaatctacccttaaaacttaagctcgaagaatgaagtagtaaactccagaattaacgaaagccataacaatgagg  23228200                                                                                            ---------                                                                                            ------>NtERF2                                                                                           <---------ANAC46                                                                                           <---------LBD16                                                                                          <---------LBD16                                                                                          <------NtERF2                                                                                          --------->ATERF1(1)                                                                                          <----------                                                                                         --------->ABI4(2)                                                                                         ------>NtERF2                                                                                        --------->ALFIN1                                                                                      <---------ATERF1(1)                                                                                      <---------DEAR3(2)                                                                                      <---------ORA47(2)                                                                                     <---------At1g77200                                                                                     <---------DEAR4(1)                                                                       <---------ANAC58 <---------DEAR3(1)                                                                --------->ALFIN1     <---------DREB2C(2)                                                               <-------MYC2          <---------DEAR3(1)                                                               ------->MYC2        <-----------HVH21-                                                               <-------MYC3       <---------O2 <-----                                    <---------ZAT14            ------->MYC3       --------->TGA1a----                                    --------->ZAT14            <-------MYC4       --------->O2 ------                                    --------->At4g35610        ------->MYC4       --------->ANAC58  -                                    <---------At4g35610       --------->O2        <---------TGA1a----                                    <---------ZAT2            --------->TGA1a     --------->bZIP60(2)                                    --------->ZAT2            <---------TGA1a     ===================     ----------->GT1           ----------->HVH21              <---------O2   --------->ANAC46<------NtERF2   <---------ZAT14       <-----------GT1                      <---------ANAC55(2) --------->ANAC46 -- --ZmHOX2a(1)          <---------AHL20(2)               ------->TEIL   <---------ANAC58--------->ATERF1(1) ->YAB1               --------->AHL20(2)     <------ZmHOX2a(2)--------->ANAC55(2) --------->ANAC58---   aatagtatagttttaaaacccaaattttatcgactcacagctctgagatcgagtgatgtatcacacgtgttgttcttgccagacacgtcggtgccgggaa  23228300      --------->DAG2     ---------->DOF2  --------->AtMYB61 >LBD16    ----------->HVH21 -------------TaNAC69(2) ----->MYB83 ----ARR14(2) ----->MYB46(3) --->ARR14(2)<---------LBD16                                                                   <----- ----->MYB46(1)                                                                                ------ ----->DEAR3(2)                                <---------YAB1                         <---------AHL20(2) ===============bZIP_DOF       --------->At5g28300                                    --------->AHL20(2) ------->ORA47(1)  <------ZmHOX2a(1)        <---------YAB1------>ZmHOX2a(1) <------------CBF   ------ ------>DEAR3(1)*TSS       --------->MYB52(1) <------------CBF  <---------ALFIN1   <----------DOF2  -   ccgaccaaaaagtttgacggaggacgaaggaacggtgagtttttttgttattgttctctcctctctccacatagtacgaattgggcttttaattcagtgc  23228400                                                                               <---------PCF2                                                                               --------->TCP15(1)                                  <---------AHL20(2)<----------DOF2           <------MYB83                                 --------->AHL20(2)<---------ANAC58           <------MYB46(1)                        --------->LBD16      <---------MYB46(3)              <---------MYB46(3)                       --------->LBD16       <------MYB46(1)                --------->ALFIN1  --------->DAG2      <---------LBD16        <------MYB83                 <---------ANAC46 ----ZAT14           ------>ZmHOX2a(2)      <---------AtMYB61             <---------ANAC58         -- --->At4g35610     --------->ARR11(3)      <--------P <---------ARR14(2)  <---------ANAC58         <- --->ZAT14  <---------YAB1 <-------TEIL   <-------GAMYB      --------->AHL20(2)--------->TCP20    <-- --------->DOF2  <---------YAB1  <---------AHL20(2)<---------ANAC58     <---------YAB1--------->YAB1   tgaaaaggcccattatgttatgatcccggttcatattaattttgggttggtttgcttatccgataaattgaattttgagtgggtccaattttaaaactca  23228500                                                         ------>ZmHOX2a(1)                                    --------->AHL20(2)  --------->TOE2(3)                                    --------->ICU4   <---------ARR11(3)                                    <---------AHL20(2) ------>ZmHOX2a(2)                               ----------->GT1       --------->ARR14(2)                              ------>ZmHOX2a(2)      --------->ARR11(3)                              ==================================HOX2a_HOX2a    ----------->GT1           =============================HOX2a_HOX2a  ---------->DOF2          --------->ATHB12          <---------ARR14(2)                       ------- ------->HSFB2a(2)        --------->ICU4            <------ZmHOX2a(1)                         ------- --------HSFB2a(2)        <---------YAB1    --------->GLK1(2)                      --------->TOE2(3) -------LBD16          <---------YAB1   --------->YAB1<------ZmHOX2a(2)      --------->At4g35610   tcgggaaagtagaaattgacaaattgtgatgatcggaaaaaattagaatccaaaggatcctaaactctgatgtctgatcagataacataaacaaaaccct  23228600                                                                             --------->DEAR3(1)                                                                          ------->GAMYB                                                                          --------->DEAR3(1)        -                                                                  --------->LBD16                 <--                                                                 <---------ANAC46              <-----                                                            <---------At4g35610              <-------                                  <------ZmHOX2a(1)    --------->ARR14(2)--------->DEAR3(2)  -------- -->TOE2(3)                     <---------TOE1(2)      <---------ARR14(2)--------->MYB46(3) --------- -->TOE1(3)              <-------TEIL              <---------LBD16------>NtERF2          <---------YAB1   aattcgatgtttgaagagagtaatcgatacatcttaggaatgagagagcgagactcggattccactgccgcgaaaaccgccgttcaaggctacgattatg  23228700              ------>ZmHOX2a(2)                                                      ----------->HVH21 -------->LBD16  --------->ANAC46                                           --------->TOE1(2) -------LBD16 =====================================HOX2a_HOX2a              --------->TOE2(2) ----YAB1    <------ZmHOX2a(2)               ---------->DOF2               <---------ANAC58 <-------- --ICU4     <---------ARR14(2)              <------ZmHOX2a(1)              ----------->RAV1(2) ->YAB1     --------->ARR14(2)   <---------ARR14(2)       ---------->DOF2  <---------ANAC58<---------TOE2(2) >ICU4 <---------ANAC46          --------->ARR14(2)    <------ZmHOX2a(1) <-----------GT1<---------ANAC46   accggaattgtttggatccacgactgagtaagacgaattcgttggaggaaagatggaggagaaagagaaacaaaattacctgcgaatgcgacggaggtta  23228800  Previous    Next  AGI:  At5g57300.1    Description:  UbiE/COQ5 methyltransferase family protein. similar to UbiE/COQ5 methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT1G23360.1); similar to hypothetical protein OsI_005284 [Oryza sativa (indica cultivar-group)] (GB:EAY77437.1); contains InterPro domain UbiE/COQ5 methyltransferase; (InterPro:IPR004033) Range:  from: 23225787    to: 23228316    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g57310.1    Description:  unknown protein Range:  from: 23228256    to: 23228846    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version