Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         <---------AHL20(2)                 ------>ZmHOX2a(1)                    <---------AHL20(2)                 ----------->GT1              <-----------GT1                         <---------AHL20(1)              ---------->DOF2             <-----------GT1                          --------->AHL20(2)           --------->TOE2(3)          <---------AHL20(2)                      <---------MYB52(1)             --------->GLK1(2)         <---------AHL20(2)                      --------->LBD16             --------->YAB1         --------->AHL20(2)  <----------DOF2    --------->ANAC46           --------->AHL20(1) --------->TOE2(3)        <---------YAB1        --------->ANAC55(2)        --------->AHL20(2) --------->TOE1(3)   <----------DOF2           <---------LBD16            --------->YAB1----------->GT1 --------ARR11(3)<---------CCA1(2)    <----------DOF2--------->ICU4     --------->AHL20(2)   aaatcttaaaatttttttcctatcttttatgctttggaggcttttcttctccgtaatttttttgtttttcacaaaaaaataataatctaaaagttaaatt  23221300                          <------ZmHOX2a(2)                         <-----------HVH21                       --------->LBD16                     <---------LBD16                    -------->P               <-----------GT1                                             <---------ZAT14           --------->AHL20(2)    ---------->ID1                            --------->ZAT14           <---------AHL20(2)--------->ANAC55(2)          ---------->DOF2  --------->ZAT18          --------->AHL20(2) <---------ANAC55(2)       --------->YAB1--------->YAB1                <-      <---------YAB1--------->MYB52(1)        <---------ICU4  --------->TOE1(3)                    <-   ----------->TGA1--------->MYB52(1)        --------->ICU4--------->DAG2  <---------ZAT18  ---------   tggaaatgacgatttaattactaaccggatcacttgtctctatggacataatttcactcataaagcttaaattatagtgcacaaaaaaaaaaacagctta  23221400                        -------->HAHB4                        --------->ATHB51                        --------->ATHB12                       <---------ATHB51                                ---------->DOF2     --------->HSFB2a(2)<--------ATHB1                            ===================================     <---------HSFB2a(2)<---------ICU4                         ------>MYB83    <---------LBD16    <---------AHL20(2)                      ------>MYB46(1)  <---------YAB1       --------->AHL20(2)                      -------->P                     ------- --------AHL20(2)      <---------ATHB12                      <---------MYB46(2)            --------->MYB52(2) --------ATHB51        --------->ICU4                        <---------MYB59       <---------DAG2 >At4g35610 --------->MYB52(1)        --------->YAB1<---------DAG2<---------------AGL15  <---------MYB52(1)   aattattctgggactaactaaacaaataattgaatgccaaaaataagaaattcaatttttgtgcctaccaaaaaaaagaaattcaatttttgttagttat  23221500                                                                                 ----------->GT1                                                                              --------->MYB52(1)        <----------DOF2                                                       ------>MYB83        <---------------AGL15                                                 ------>MYB46(1)       <---------ANAC58                                                     --------->AtMYB61       <---------ANAC46                            --------->ANAC58         <---------MYB59       <---------ANAC58                            --------->ANAC58     ------->GAMYB    <---------MYB52(1)                  <---------At4g35610            --------->MYB46(3)          <-   <-------GAMYB                       <---------TOE1(3)               <---------MYB52(2) ----------- =======================MADS_MADS   <---------MYB52(1)               ----------->RAV1(1) ----------->GT1 -->ATHB12                        <---------ZAT6   --------->ANAC46 <----------ID1   ---------->DOF2   tggcccgttgctttaagaagttttggctcagtttcactgttaagctaaggcccaagacagtaaggctagagcaacaaaccaaaccgaaaaatcggaaaaa  23221600             <-------GAMYB            <------MYB46(1)       ----------->GT1            <------MYB83     --------->MYB46(3)                                                    <-            <---------MYB46(3) --------->MYB52(1)                                       --------->TOE1(3)          <--------P       --------->AtMYB61                                            --------->TOE2(3)    --------->ARR11(3)  <---------PCF5                 <---------YAB1                  *TSS       <--    <---------ARR11(3) <---------ETT(2)              <---------AHL20(2)         ---------->DOF2------ ----------GT1        --------->ALFIN1  --------->MYB46(3)                  --------->TOE1(3) ------- >GT1 ------>ZmHOX2a(2)--------->WRKY38(1)  --------->YAB1                  --------->TOE2(3) -------   ttcactgatcttgttggttaaccggtggaccacaaccggttaacaaacatcgtttttatttttgttttgggctctaaaccctaaaagaaaccttcaacgc  23221700                                                                                            <--------                                                                                           <---------ARR11(3)                                                                                           --------->ARR11(3)                                                                                           --------->ARR14(2)                                                                                           <---------ARR14(2)                                                                                         ----------->ARR10                                                                                        <------NtERF2                                                                                       --------->LBD16                                                                                      --------->DEAR3(1)                                                                                     <---------LBD16                                                                                    --------->ABI4(1)                                                                                    ------>NtERF2                                                                                   --------->DEAR3(1)                                                      <---------ICU4               <---------ALFIN1   <---------MYB52(1)                          --------->ANAC46                   --------->DEAR4(2) --------->MYB52(2)            --------->GLK1(2)     --------->ICU4               --------->MYB46(3) --------MYB52(1)      --------->At4g35610     --------->ANAC58                   --------->DEAR3(2) -------SPL7        ------>ZmHOX2a(1)       <---------REM1(2)                   <---------ALFIN1 ->GAMYB<<<<<<<<<TBF1  <---------At4g35610 <---------HSFB2a(2)                --------->ANAC46      - -->DEAR3(1)     ------>ZmHOX2a(1)         --------->HSFB2a(2)                --------->ANAC58     -- -->ANAC46 <<<<<<<<<TBF1      <---------GLK1(2)--------->ANAC58               --------->ANAC58-------   cgttcgtttcttcttcttcctcctctgctacagaatcgttttgctctagacgctaattatgtcaaatcgacctgagttactcgcaccgccggagatattc  23221800                                                                                             <-------                                                                                             ------>ZmHOX2a(1)               --------->ANAC58                                                              --------    <---------ARR14(2)                              <---------TOE1(3)              <-----------GT1  <---------YAB1                         <---------ANAC46                     <---------AHL20(2) -RVE1(1)   --------->ZAT2             --------->ARR14(2)               --------->LBD16      -------- -------->YAB1<---------LBD16          <---------ARR14(2)              --------->HSFB2a(2) <---------LBD16 --------->TGA1--------->ANAC58       <---------CCA1(2)                --------->LBD16     ---------- -->GLK1(2) <---------ZAT2       ------>ZmHOX2a(1)  <---------TOE2(3) <---------LBD16 <----------DOF2   tatgacgataccgaagctcggaagtatacttcttcctctcgtatcgtcgaaattcaggttttccaattgtttccccgaatttttttttctttctcctgaa  23221900                                                                                <------MYB83                                                                                <------MYB46(1)     <----------DOF2    <----------DOF2                                   --------->LBD16   ---------     <---------DAG2 <-----------GT1                               <---------ANAC58         <---------GLK1(2) --------AGL15     <---------AHL20(2)                             <---------ANAC58       <---------TOE1(2) ------->AGL15    --------->AHL20(2)                <----------DOF2<----------DOF2      ------>ZmHOX2a(1) ->LBD16  <---------ANAC58               <---------YAB1     --------->GLK1(2)  <---------AtMYB61 ->RAV1(2)<---------ANAC58      <---------------------WRI1<---------At4g35610<------ZmHOX2a(1)      -   tatagcacttttgcttaaaattttatcttttacaggcgaagttatcagagagagctttggagcttctggctttacccgaggatggtgttcctagattctt  23222000                                     <---------YAB1                                     --------->ICU4                                   --------->YAB1                     --------->HSFC1(1)                               <-----------GT1                        <---------HSFC1(1)                          --------->AHL20(2)                          --------->HSFB2a(2)       ----------->GT1    <---------AHL20(2)                <---------At4g35610 <<<<<<<<<<<<<<<<<LFY    --------->AHL20(2)     --------->TOE2(3)     <---------HSFB2a(2) >GLK1(2)              <----------DOF2         ----------->GT1        ------>ZmHOX2a(1)  <-----------RAV1(1) -------->ANAC46       ------>ZmHOX2a(1)<---------YAB1  <-----------GT1          --------->ZAT14   <-   actcgacattggtaaaaaaaacatccttttaatttactgatgatgagaaatgttaatttttctgctcgtttcctagaaattagtttagtcaatgttgttg  23222100                                        <---------AHL20(2)    <----------DOF2      <----------DOF2            ------->TEIL              --------->GLK1(2)             --------->YAB1      <---------------AGL15    <---------ZAT18       <---------WOX13(1)                 <------ZmHOX2a(2) --------YAB1                 --------->AtLEC2     --------->ATHB12         --------->YAB1     <-----   tatgattccttttatttgaatattgtagttcaatgcacatatataaacatgtttgattgaaattcttttctaaagttttcatatttttcgatcatcagtt  23222200  Previous    Next  AGI:  At5g57280.1    Description:  methyltransferase. similar to hypothetical protein OsI_009146 [Oryza sativa (indica cultivar-group)] (GB:EAY87913.1); similar to Os02g0804300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048432.1); contains InterPro domain Methyltransferase type 11; (InterPro:IPR013216) Range:  from: 23221687    to: 23223885    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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