Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   ------>ZmHOX2a(2)                                <------ZmHOX2a(2)                               <---------ARR14(3)                               --------->ARR14(3)                               --------->ARR11(3)               =========================HOX2a_HOX2a               ========================HOX2a_HOX2a               <------ZmHOX2a(1)--------->CCA1(2)       <---------YAB1          <---------ARR11(3) --------->ARR14(2)            <---------ARR14(2) <---------ARR11(3)            --------->AGP1 --------->ARR11(3)            <---------AGP1                                                       - <---------ARR14(2)      --------->YAB1      ---------->ID1                                    ------ ------ZmHOX2a(1)   <---------YAB1      --------->GLK1(2)           <------ZmHOX2a(2)  --------->HSFB2a(2) ------LBD16 <---------TOE2(3) --------->ARR14(2)<----------DOF2--------->ALFIN1       <---------HSFB2a(2) -----GT1  ---------->DOF2   ----------->ARR10   <---------------AGL15--------->WOX13(1) ---------->DOF2   caggattttgtgataaaggattatcaatagtaagatctggagaatttgttcctttcttaggcaaatgtggatcaattaagagtcttcttctcaaagcagc  23200600                                                                           ------>MYB83                                                                           ------>MYB46(1)                                                                         <---------------AGL15                                                                         --------------->AGL15                                                                         <---------MYB111(1)                                                                        ----------------->AG                                                                        ----------------->AGL2                                                                        ----------------->AGL1                                                                       -------->P   ------>MYB83                                                     --------->At4g35610           ---   ------>MYB46(1)                                                  <---------At4g35610         ----- <---------MYB59                                             --------->GLK1(2)              --------- <---------MYB111(1)            <----------DOF2              --------->ARR14(2)      --------->AtLEC2 -------->ANAC55(2)       --------->YAB1   <----------DOF2   <---------ARR14(2)<---------HSFB2a(2)--- --->At4g35610  <---------ARR11(3)     <---------GLK1(2)     ------->TEIL<---------MYB59    ---------   atacctaataaacaacaacatctaaaaatcaaaactttacaaattcttttgtttctgagtctgaatctggagctaccaaatcgagaaatgcaaaccctaa  23200700                                                  <---------MYB52(1)                                                <---------MYB46(3)                                              --------->At4g35610                                              <---------At4g35610                                 --- ------>ANAC58                              <-----------RAV1(2)                                ------ ----->DOF2                           --------->HSFC1(1)                  --------->ALFIN1  --------- >TOE2(3)                             --------->HSFB2a(2)          <---------YAB1          ---------- ------>ANAC58        ----------->GT1 <---------HSFB2a(2)     <---------At4g35610  <------ZmHOX2a(1) >TOE1(3)           ---------->DOF2  <---------LBD16         <-----------ARR10 <------ZmHOX2a(1) <---   aagcaaaaacttcaatgtaggggaaagtcaaaaccttcttctggaatcagctgttactctgcgaagctcatcaatggtggaggaaggagaagacggtaag  23200800                                                                    --------->TOE2(3)                                                                   --------->ATHB12                                                          --------->ATERF1(1)                               <---------HSFB2a(1)        <------NtERF2                               <---------HSFC1(2)        <---------ATERF1(1)                               --------->HSFB2a(1)       <---------ERF1                           --------->ANAC58              <---------DEAR4(2)                           --------->ANAC46              <---------RAP2.3(1)                       ------>NtERF2                     <---------ORA47(2)                      --------->bZIP60(1)                ------>NtERF2                      --------->ANAC58                  <---------RAP2.3(3)       ----------->ARR10  ------>NtERF2                 <---------RAP2.3(2)       <-------TEIL   --------->ANAC46                  <---------DEAR3(1)   <---------TOE2(2)  --------->ANAC58                  <---------RAP2.6(2)   <---------TOE1(2)  --------->RAP2.6(2)--------->DEAR3(2)        <--------HAHB4  --------->LBD16    --------->SPL7      --------->MYB46(3)--------->DEAR3(1) <---------TOE1(1) <---------SPL7   <---------HSFC1(1)  <---------ANAC46 --------------------->WRI1--------->ANAC58    <---------ARR11(3)  <---------ICU4 ------>GLK1(2)    ----------->HVH21--------->HSFC1(1)  --------->ATERF1(2)                    <----- ----->ARR10--------->ANAC58   --------->HSFC1(2)------>ZmHOX2a(2)--------->ICU4            <-------- >At5g28300 --------->ANAC58  ------->TEIL     --------->ARR11(3) <---------YAB1        <---------ANAC58 ->GT1<--------P <---------At4g35610--------->HSFB2a(2)--------->ATERF1(1)              <---------ANAC58 ------GLK1(2)   --------->At4g35610<---------HSFB2a(2)<---------ABI4(1)              --------->ARR11(3)   attccgaggttgattcgccatcggacgccacgaagcttctcgaaccgatgatcttgaggcggcgaggcatcattagaagtgcaaggagggtcttgtgttg  23200900                                                          <---------ANAC58                                               <---------ARR14(2)    <---------LBD16                            <---------ARR11(3)  <---------ARR14(2)                           --------->ARR14(2)  --------->ARR11(3)                          <---------CCA1(2) <---------GLK1(1)                <-----------GT1         <---------ANAC46 ----MYB46(3)                     --------->ANAC46        <---------ANAC58      ----------->GT1 ---RAV1(1)         ------->TEIL<-----------GT1--------->ARR11(3)     <---------GLK1(2)   ttgatatctgggtttcttcatgaatcgccatgttttacacaattcatcaaatcttcgatttcgtgccaaatcgattcttgtttcgaaaaaacaatttggg  23201000                                     *TSS                 <---------ETT(2)                        <---------AHL20(2)       <---------DAG2            <---------YAB1    <---------YAB1     <----------DOF2  <----------DOF2       --------->AHL20(2)    <-----------GT1                 <------------CBF  <---------DAG2       --------->AHL20(2)    ---------->ID1              --------->YAB1   <---------AHL20(2)   tttactttttgtttatgagaaaacataaaattatgctaaaaacttttgtcactttttctttcgacaaaaatcgaatcaaaaattgtattcattttttttt  23201100                       <---------ANAC58                       <---------ANAC58                       <---------ANAC46                   <---------WOX13(1)                  <------------CBF                 --------->ATHB12                <---------YAB1                                                              <--------           --------->ARR14(2)                              --------->HSFB2a(2)          --------->REM1(1)           <---------ARR14(2)            <-------TEIL      <---------HSFB2a(2)     --------->ANAC58           --------->GLK1(2)<----------ARF1    --------->bZIP60(1)        <-------TEIL <-------TEIL          <---------GLK1(2) <----------ID1     <---------bZIP60(1) <---------ANAC46--------->ANAC58   tcatgaggctgagaatctgtgattggcttggagacaagaatggttcatgacttcatgttttccaaaacgacgtagtttcattctcaagcttcatcttttt  23201200                               <-----------GT1                              <---------YAB1                            -------->ATHB1                            --------->ATHB51                            <---------ICU4                           --------->AHL20(2)                           --------->ICU4                           <---------YAB1                   ----------->GT1         <-----------GT1                 --------->ZAT14    <---------MYB52(1)                 <---------ZAT14  <---------ZAT6          <---------YAB1   <---------AHL20(2)                 <---------YAB1                    -----    --------->AHL20(2)  --------->ICU4   <---------AHL20(2)<---------YAB1                <---------GLK1(2) --DOF2   <---------TOE2(3)--------->AHL20(1)--------------->AtSPL8       <------------------------ANAC81   tcatcaaaaaataagatagaacagtgaaaattattactgttattttttctgtgccactattgttattgttgaattttgtttttcttcaatagattcttct  23201300                     <---------YAB1                  <------ZmHOX2a(2)                 --------->ARR11(3)                 <---------ARR11(3)                                                 --------->O2              <---------TOE1(2)                                                     <---------O2             --------->LBD16                                        ==========================bZIP_DOF            <---------TOE1(1)                                  ---------->DOF2      --------->TGA1a         --------->ARR14(2)                                --------->WOX13(1)       <---------ANAC46         --------->GLK1(2)                     ---------->DOF2 ===============================bZIP_DOF         <---------ARR14(2)                    ===============================================bZIP_DOF ---->HSFB2a(2) <------ZmHOX2a(1) <----------ID1        ------->TEIL---------->DOF2 <---------TGA1a   aaaatgaagagaatccgaggatcatttttgaacaagaagacaaaaatccaaaagaatgaatcactcaaagtaaagtatcaaactcgacgtgagagaaatg  23201400                       <---------ICU4                                                        <-------                    --------->YAB1                                                          <--------                 ------>ZmHOX2a(1)                                                        --------->ICU4             <-----------GT1                 <-----------HVH21                            <---------YAB1           <-----------GT1            ---------->DOF2          <----------DOF2 <---------AHL20(2)         <---------AHL20(2)    <----------DOF2  --------->WOX13(1)           --------->AHL20(2)     <   tgtaagtctattttttctcctctcattatgcctcttttttaaaagagggtcagtcactcttcatactttacataaacatatatatatgaggcatgatttt  23201500  Previous    Next  AGI:  At5g57210.1    Description:  microtubule-associated protein-related. similar to microtubule-associated protein [Arabidopsis thaliana] (TAIR:AT4G29950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15557.1); contains InterPro domain RabGAP/TBC; (InterPro:IPR000195) Range:  from: 23198059    to: 23201037    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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