Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <-----------GT1                                                 <---------ICU4                                             <---------AHL20(2)                                             --------->AHL20(2)                                             --------->AHL20(1)                                             <---------AHL20(1)     --------->AtLEC2                       --------->AHL20(2)                           --------->AHL20(2) ---->TEIL---------->DOF2               --------->ICU4 <----------DOF2                ------->TEIL --->ANAC58   <----------ID1       --------->ANAC58    <---------DAG2         --------->YAB1 --->ANAC58--------->DAG2          --------->ANAC58 <-----------GT1        --------->WOX13(1)   cacatcaatgcaaaaagagacaaaacttctcttaaccaagaaatgaataaatttttactttttacaaatgtccaattcaattagcatgcattttaaaaac  23161800                                                                                  --------->YAB1                       ----------->GT1                                            <---------ICU4                 <---------YAB1     <---------AHL20(1)                            -------->HAHB4              <---------ARR11(3)    --------->ARR11(3)  <---------DAG2           --------->ICU4------            --------->ANAC58        <---------ARR11(3)<---------At4g35610        <---------ATHB51            --------->ANAC58   ----------->GT1 ---------->DOF2                   <---------ATHB12----   <-----------GT1  <---------TOE2(3)<---------AHL20(2) <----------DOF2        --------->YAB1  <-----   gattttttctccacaagttattaatgtgtaaattagtatatatttgaaaaaaagacagcttttttttatgctcttattcgctaataatgaccaaaaatta  23161900                          <---------ALFIN1                 --------->ANAC46              --------->ZAT14          <---------------AtSPL8    --------->At5g28300                                          ----         <---------YAB1  --------->ZAT18                                                         ----      <---------YAB1     --------->ZAT14                                                         ----    --------->CCA1(2)    <---------ZAT14                                                  <---------ANAC46   --------->ARR11(3) <---------At4g35610                          ---------->DOF2        <---------ANAC58   <---------ARR11(3) --------->At4g35610    ------>MYB83 <------ZmHOX2a(1)               ----------- --->AHL20(2) <---------ZAT18      <---------ZAT6         <----------ID1            --------->DAG2 ------>DOF2  --------->ZAT18      ----------->GT1   <------ZmHOX2a(1)      <----------ID1<---------ANAC58 ----AHL20(2) <---------ZAT14<---------ZAT6  ------>MYB46(1)  ---------->DOF2      ---------->DOF2   aaagagatatgatgagtacactgaagctgcactgttactgtaaaaccaaatgagaggagaggaacaaagaaaagagagaagacaaaaaagttgagtgaaa  23162000                                                                    <---------AHL20(1)                                                                    <---------AHL20(2)                                                                    --------->AHL20(1)                                                                    --------->AHL20(2)                                                            ---------->DOF2         ---------->DOF2                                ----------->GT1      <------ZmHOX2a(2) ----->AtLEC2            --------->At4g35610           --------->DAG2 --------->YAB1 ------->GT1       ---------->DOF2                 --------->YAB1  --------->YAB1                ---- -------------------->ANAC81           ---------->DOF2---------->DOF2<---------YAB1              <--- >GT1  --------->YAB1    <---------At4g35610      <---------ATHB12<---------YAB1                -----   tgcaaaaaatcaaaagcatacaaaagctgctcatttgtccaaaaagaaacccatcataaagtaaaagcattataatgagatcaaaacccttcgaaaaatt  23162100              <---------DAG2            ------>MYB46(1)            ------>MYB83    <---------AHL20(2)   --------->AHL20(2)       --------->AHL20(2)                                         <------MYB83-- --------->YAB1             <---------ATHB51                        ----------->GT1    <------MYB46(1) ----->AHL20(2)           --------->YAB1  <------ZmHOX2a(1)       --------->ICU4   --------->ZAT2 --- ------AHL20(2)    --------->TOE2(3)    --------->YAB1  --------->ANAC46           <---------ZAT2---- ---->AHL20(2)<----------DOF2      ------------>CBF   --------->ANAC46   ---------->DOF2       <-----   taaaaataaaaaccaactttttcttaaaaaataattcaacaataggaacagaaaacacacagcatgaaataagtataaaggaaccagcttggtctaattt  23162200      *TSS                                                      <<<<<<<<<TBF1 ---->ZmHOX2a(1)                                      --------->ANAC55(2)         <---------ANAC58 ------>TOE2(3)                                       <---------ANAC58            <---------ANAC58 ------------->AG                                     <---------ANAC58         <---------CCA1(2) ------GT1                                <----------DOF2      xxxxxxxxxxxxxxxx>smallRNA(s)   ccttatctgtctaaaactctcttaaacctctgtctcttctctctctttcttctcttacttatcttcttcttctcttctctcatttcttgagttctctctc  23162300                                                                                                  ---                                                                                               <-----                                                                                              <------                                                                                             <-------                                                                                           <------MYB46(1)                                                                                           <------MYB83                                                                                           <---------MYB46(3)                                                                                          --------->ALFIN1                                      <---------HSFC1(2)                                  <---------DEAR3(1)                                      --------->HSFB2a(1)                                 xxxxxxxxxxx                                      --------->HSFC1(2)                                  <---------AtMYB61                                      <---------HSFB2a(1)                                <---------ABI4(1)                                     --------->HSFB2a(1)                                <---------ANAC58                                     <---------HSFB2a(1)                                <---------ANAC46                               ---------->DOF2                                   <---------------AGL15                          --------->TOE1(2)                                    <<<<<<<<<GATA-1-------                          --------->TOE2(2)<----------DOF2                    <-----------GT1<-------       <----------DOF2   --------->YAB1<---------ARR14(2)              <---------ANAC46 <---------ANAC58   aagactcttcttttcttcagtcttcaaacataagaaaggaagttccttttgtttcttctgttttagttctcttgtgggtttatctatttggggtggtggt  23162400                                                                                               <-----                                                                                              <------                                                                                           <--------P                                                                                       <---------ANAC46                                                                                      <------NtERF2                                                                                     --------->MYB55(2) ------->DOF2                                                                        <---------MYB46(3) --GAMYB                                                                            --------->ALFIN1< ---MYB46(3)                                      --------->HSFB2a(2)               <---------AtMYB61 --ANAC46                                         <---------HSFB2a(2)            <---------DEAR3(1) < xxxxxxxxxxxx>smallRNA(fl3)                   <----------DOF2                ------->MYC3 <-------GAMYB -->MYB55(2)                             ---------->DOF2       <-----------GT1--------->ALFIN1<------ --AtMYB61<----------DOF2             --------->YAB1    ----------->GT1      <-------MYC3<---------MYB46(3)   taaaggagggagctttgggattagaagtttttcagtgaaatcagaaagctttcgagagaggtttttttcaatttcaaaacgtgggggtggggggttaggg  23162500                                                    --------->ZAT14                          <-------GAMYB             <---------ZAT14 ----ZAT6                <---------MYB46(3)   --------->ANAC58 ---TOE2(3)              ----------->GT1 ------->GAMYB ---------TOE1(3)       --------->ALFIN1--------->MYB46(3)                                      <---- ---------TOE2(3)   <-----------RAV1(2)<---------At4g35610   <---------At4g35610       <---------DAG2 ---TOE1(3) --------->CCA1(2) <-----------GT1 --------->ANAC58                         <----------DOF2   ttagggtttacaagttatgcgaacaggtggttatacgattcaacagacactcactacagaggctgcttctgttttgaagcactctctcactttagctagg  23162600                                                                  <----------DOF2                                                         <----------DOF2        <---------AHL20(2)                                                        ------>ZmHOX2a(2)      <---------YAB1                                              <---------TOE1(3)  ------>ZmHOX2a(2)                                              <---------TOE2(3)<---------ARR11(3)       --------->DAG2            <-----------RAV1(2)              ---------->DOF2   --------->ARR11(3)      ---------->DOF2        --------->AtLEC2      --------->TOE1(3)       --------->ARR11(3)    --------->AHL20(2)      < --ZmHOX2a(1)<---------TOE1(3)--------->TOE2(3)       <---------ARR11(3)    <---------AHL20(2)      <   agaagaggccatgctcaggtttcttaacaaaaccttcaacattttgttaaagttttgatctttttgatctttcgatgttttattaatggaaaagtttttg  23162700  Previous    Next  AGI:  At5g57130.1    Description:  protein binding. similar to heat shock protein-related [Arabidopsis thaliana] (TAIR:AT4G29920.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66169.1); contains InterPro domain Clp, N-terminal; (InterPro:IPR004176) Range:  from: 23162206    to: 23166794    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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