Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            -------->HAHB4   ----------->GT1                        --------->YAB1 --------->DOF2                          <---------YAB1 -------TOE2(3)                         <---------TOE2(3) -------YAB1                           --------->YAB1 -HAHB4                              --------->AHL20(2) >ATHB1                              <---------AHL20(2) >HAHB4                             --------->YAB1 ->ATHB51                       <---------YAB1                                                ======= --AHL20(2)                    <---------AHL20(1)                                             ------>ZmHOX2a(2) ->YAB1      --------->YAB1    <---------AHL20(2)                                           <-------- --ICU4      --------->AHL20(2)--------->AHL20(2)                                           --------- -ATHB51 <---------AHL20(2)   --------->YAB1                   --------->YAB1          ------>ZmHOX2a(1) >ICU4   --------->AHL20(2)  <---------YAB1                   ================================HOX2a_HOX2a -YAB1  --------->AHL20(2)  --------->AHL20(2)                <------ZmHOX2a(2)        ==============HOX2a_HOX2a   aagaaaggaaattaataaaaaaaactacaatattataattttaatgatacaaaacgagacgacgatcacaagaagaacacgagtacttcctcttgatctt  23144500                                                                                       <----------DOF2                                                                                      <---------ANAC58                                                                                      <---------ANAC46                                                                                      <---------ANAC58                                                                                   <-------PIF5                                                                                   ------->PIF5                                                                                <-----------RAV1(2)                                                                              <------ZmHOX2a(2)                                                                             --------->ARR14(2)                                                                             <---------ARR14(2)              --------->MYB52(1)                                           --------->ANAC58        <------ZmHOX2a(1)                                                  --------->ANAC58      <---------------AtSPL8                                           <------ZmHOX2a(1)  ---------->DOF2       <-------TEIL                  <----------DOF2  ==============HOX2a_HOX2a ==============HOX2a_HOX2a                 --------->ANAC58         <---------ICU4<---------ZAT2 -ARR11(3) --------->ANAC58                --------->ANAC58   <-----------------AGL1 <-------TEIL <-- >ARR11(3) --------->ANAC58        <---------ETT(2)   <---------DAG2--------->YAB1<---------At4g35610   gaaacaaagaggaacgaaacagaacatccattttctttcgacatcaagcatttgcactttacctccacaataaggacacgatccaggtgcttgttgtctc  23144600                                                                     <---------ANAC58                                                                     <---------ANAC58                                  ------>MYB83                   <---------ANAC58                                  ------>MYB46(1)          ------>ZmHOX2a(2)                                --------->AtMYB61         --------->CCA1(2)                                <---------MYB46(2)        <------ZmHOX2a(2)                                <---------MYB111(1)      --------->ARR14(2)                               --------->ANAC58          <---------AGP1                               --------->ANAC58          --------->AGP1                  --------->STY1(2)                             --------->ANAC58            <---------ARR14(2)              <---------ZAT2                             --------->ANAC58            <-----------ARR10               <---------STY1(2)                             --------->ANAC46            <---------ARR11(3)             --------->MYB111(1)                     <---------ANAC55(2)      <-----------GT1    <---------ANAC58      <--------P                <---------ICU4 --------->ANAC46          --------->ARR11(3)      <----------DOF2 -------MYB59  ------>ZmHOX2a(1)--------->MYB46(3)      <---------CCA1(2)  <----------DOF2   cctaactctgtctcttcctcatcacataaacacaccaaacacattgtttttctctctcagatctgagtcttgcctctctttttcttttggtagctaggga  23144700                                                                                        <---------ANAC58                                                                                  <---------ICU4                                                                                  --------->YAB1                                                                                  --------->ATHB51                                                                                  <--------HAHB4                                                                                  -------->ATHB1                                                                                  --------->AHL20(2)                                                              --------->At4g35610 <---------AHL20(2)                                                            <---------ZAT18      --------->ICU4                                              <------ZmHOX2a(2)                  <---------ATHB12                                              ================================HOX2a_HOX2a                --------->GLK1(2)            --------->ARR11(3)        <------ZmHOX2a(1)<---------ANAC58             --------->ICU4        <---------YAB1    --------->GLK1(2)----------->GT1 <---------AHL20(2)        ----------->GT1   ----------->GT1    <---------ARR11(3) <----------DOF2  <---------ATHB51   agttttagttttgtaaaaattctgtaatgggtttattttgtttggaagatcagagaattttgtgagctttagaggaaaattcaattattttcttgagaaa  23144800                                                                                              <------                                                                                          <------MYB46(1)                                                                                         --------->MYB55(2)                                                                                         --------->MYB111(1)                                                                                         <---------MYB46(3)                                                                                         --------->MYB46(2)                                                                                         <---------DEAR3(1)                                                                                         --------->MYB111(2)                                                                                         <---------AtMYB61                                                                                        <---------MYB55(1)                                                                                        <--------P                                                                                      <------MYB83                                                                                      <------MYB46(1)                         <---------ANAC46                                        <---------CCA1(1)                    --------->LBD16                                              <---------GLK1(1)                   <---------ANAC46                                              <---------RVE1(1)                   <---------ANAC58                                             *TSS  <---------MYB46(3)                   <---------ANAC58                                             <---------ARR11(3)                  <---------LBD16                                           --------->CCA1(2)<-------TEIL           --------->HSFC1(2)                                            <---------YAB1<-------GAMYB           <---------HSFB2a(1)                                           <---------TOE2(3)<------MYB83           --------->HSFB2a(1)                             --------->AHL20(2)   --------->ARR11(3)           <---------HSFC1(2)     ---------->DOF2          <---------AHL20(2)  <------ZmHOX2a(1)   actgtttctgagaaacttcttgcggaggcttatattgaaagagcaaattttgaagtcttatttttttaagtcgctaagataggatatttggttggtgcat  23144900                                                                                     <---------RVE1(1)                                                                  --------------->AGL15                                                                  <----------DOF2    <---------CCA1(1)                                                                  <---------------AGL15                                                                 <-----------------AGL2      ========                                           <-----------GT1       ====================================                                       <---------DAG2            <-----------------AGL3   <----------                                      <---------ANAC58   --------->ANAC55(2)        <---------ARR11(3)                      <------ZmHOX2a(1)<----------DOF2   <---------ANAC55(2)    <---------LBD16      ============================================================================MADS_MADS  <-------      <----------DOF2----------->GT1  <---------ANAC58   <---------ANAC58      <---------ANAC58      <---------------AGL15  --------->RAP2.6(3)         <---------ANAC58      <---------ANAC58      --------------->AGL15 --------->MYB52(1)         <-----------GT1         <---------ANAC46 ---AtLEC2     ---------->DOF2    <----------DOF2  --------->AHL20(2)          <---------AtLEC2    <-   gaacgagactttatagagaaaggaggaaaaaaacggctttgctttttgcccgttttattacttgacttctttttttggtttgcctggatattttactatc  23145000                                                                                   --------->ZAT2                                                                              --------->YAB1                                              <----------DOF2               <---------AHL20(1)          <---------At4g35610       ----------->GT1               <---------AHL20(2)      <---------AHL20(2)    ----------------->AGL3                --------->AHL20(2)        ---------      <---------ICU4        <-----------------AG                  --------->AHL20(1)     <---------ARR14(2)      --------->ATHB12    ----------->GT1  <-----------GT1     --------->YAB1<---------AHL20(2) =============================================MADS_MADS     --------->YAB1  --------->AHL20(2)     <- ========MADS_MADS     <-----------RAV1(1) <---------AHL20(2)--------->AHL20(2)    --------->At4g35610 -GT1--------->ICU4  <---------ICU4 <------MYB83           --------->AHL20(2)<---------YAB1 <-------- --------AGL15       --------->YAB1 <------MYB46(1)   --------->YAB1        --------->AHL20(1)------- --------TOE2(3)    --------->ICU4 --------->MYB59   <---------ATHB12  ----------->GT1   --------->ARR14(2)   tgaggtatttattgctgacttaattatgttgtcaaatttggttaattactttcaaatcaaaataaaaataaaatggaatataataagctggaatacgcgt  23145100                                                                                       <---------AHL20(2)                                                                                       --------->AHL20(2)                                                                                   --------->AHL20(2)                                                                             ----------->GT1                                                           <---------DAG2    --------->TOE2(3)        --------->TOE2(3)                  <---------AHL20(2)               ----------->GT1     <---- >ANAC55(2)                               --------->AHL20(2)            --------->AHL20(2)    <------ --------YAB1                             <---------AHL20(2)    <-----------GT1    <---------AHL20(2) -ANAC55(2)        <----------DOF2    <---------AHL20(2)   <----------DOF2 <---------TOE2(3) <------- -->ANAC46         <---------DAG2     --------->AHL20(2)<-----------GT1 <---------AHL20(2) <---------AHL20(2)   tattcttgtttcttaattcaacttttttttaagagtaagtttaatttaatcggatgtataacttttttactgatataaatgttaaatatttatattattt  23145200            --------->YAB1            <--------ATHB1            -------->HAHB4            <---------ICU4            <--------HAHB4            --------->ATHB51           --------->AHL20(2)                   --------->YAB1           <---------YAB1                      <---------ATHB12               <---------YAB1           <---------ATHB51                  ------>MYB83--------->LBD16    --------->YAB1     <---------YAB1                          ------>MYB46(1)           <------MYB83   --------->YAB1                          <---------MYB59<------NtERF2<------MYB46(1)           <--- -----AHL20(2)    ---------->DOF2        --------->ARR11(3)            ----------->GT1           <--- ---YAB1 --------->YAB1                  <---------ARR11(3)      <---------AHL20(2)           <------ --AHL20(2)--------->ICU4            ---------->DOF2   <---------LBD16<---------MYB46(3)   <---------ICU4   taaaatcacgataataattacaaaggaaactaaacgatataaagacctaatcaaacttgcggcatattttagtgggtataacaattgtttcaagaattac  23145300     <---------------AGL15                                                                 <---------     ------>ZmHOX2a(1)                               ----------->GT1                 --------->ICU4<-    --------->TOE2(3)                                --------->YAB1              <---------SPL7 ----- <-----------GT1                                 --------->ICU4                <---------TOE2(3)----- ------DAG2                          <---------AHL20(2)                        --------------->AtSPL3 -------DOF2                        --------->AHL20(2)                        --------->MYB52(1)----- -----GT1              <---------TOE2(3)   <---------TOE2(3)                  <---------DOF5.7(2) ---   ttttttcctcaaataagtgtaatctaatgtaagaaatataaaattgtggtagtaatggtaacaatgttttcaagttttgctaacgtactgatttttccaa  23145400  Previous    Next  AGI:  At5g57123.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G29905.1); similar to hypothetical protein MtrDRAFT_AC148819g4v2 [Medicago truncatula] (GB:ABD28467.1) Range:  from: 23144148    to: 23144880    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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