Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         --------->YAB1                                                                      <---------AHL20(2)                                                                      --------->AHL20(2)                 ------>ZmHOX2a(2)    <---------RVE1(1)           <---------YAB1                <------ZmHOX2a(2)     <---------CCA1(1)          --------->AHL20(2)               <---------ARR14(2)    --------->ARR11(3)          <---------AHL20(1)               --------->ARR14(2)    <---------ARR11(3)          <---------AHL20(2)            --------->ALFIN1 --------->ZAT6                      --------->AHL20(1)       <-------TEIL     --------->At4g35610                     --------->YAB1                 <-----    --------->ANAC58   --------->GLK1(2)                        <---------ICU4           <---------AHL20(2)    --------->ANAC58   <---------ARR14(2)                      <---------YAB1            --------->AHL20(2)    --------->ANAC46   --------->ARR14(2)     ------->TEIL     --------->ICU4           --------->AHL20(2)   tattacacgtacaagtggatccaagtatctgactctacagatattttgaatctaacatttgtgtaattataatttataatctctgaagcatttaatttta  23117500                                                                                   <----------DOF2                                                                                   <---------DAG2                                                                               <------------MYB.PH3(1)                                            ------>ZmHOX2a(1)          <---------AHL20(2)                                           <---------ANAC58           <---------AHL20(2)           --                  --------->ANAC46         --------->TOE2(3)          --------->AHL20(2) <---------HSFB2a(2)                  --------->O2        <---------ATHB12      --------->GLK1(2) --------->RAP2.6(3)  --        <---------YAB1               ------>MYB83        ----------->ARR10   --------->MYB52(1)   ---       <---------TOE2(3)    ----------->GT1<---------ANAC58<---------GLK1(2) <-----------GT1 -------- ------GT1        <---------O2       ------>MYB46(1)   --------->CCA1(2)  --------->YAB1 --------->HSFB2a(2)   cttacaaataatgttagaccacgagacagaaggtaaaccaatcttccttatcccaagataagattcttcaaattaaatataacggctttttgcagaagta  23117600                                                                                               <-----                                                                                              <------                                                                                            ---------                                                 <---------ZAT14                            <--------                                                 --------->ZAT14                           <---------AHL20(2)                           ------->GAMYB --------->RVE1(1)                                 <---------ATHB51    --------->CCA1(2)      ----------->GT1<---------ARR11(3)                               --------->ICU4 <---------YAB1           --------->ANAC46--------->GLK1(2)                     <-------TEIL-------->ATHB1 -------->DOF2          --------->MYB52(1)--------->ARR11(3)  <---------ATHB51 --------->CCA1(2) ------->YAB1 <---------ARR14(2)   ----------->GT1            --------->ICU4  --------->ARR14(2) ------>ICU4  --------->ARR11(3)   <----------ID1<---------ZAT18              <---------ARR14(2) --->GT1      <---------ARR11(3) ---------->DOF2 --------->ZAT18       ---------->DOF2     --------->AHL20(2)   ataaagatagaaggaatatctagtatcaacggaaaaaaagaaaaaatctagagcacttcgaaaaattatggaccaaagaagattcagactgaaattatta  23117700                                                                                             ------>ZmHOX2a(1)                                                                                          <------ZmHOX2a(2)                                                                                         <---------ARR11(3)                                  ----------->GT1                                        --------->ARR11(3)                             --------->LBD16                                             <---------ARR14(2) ------GT1                   ------>NtERF2                                               --------->ARR14(2) ---YAB1                    <---------ANAC46                                            ------->GAMYB >ATHB51               ---------->DOF2 ---------->DOF2                                 <---------ATHB12 -ICU4          --------->AtLEC2<------ZmHOX2a(1)                <---------AHL20(2)    --------->MYB46(3)   ctgtattagtatttgtccattcacaaaatgccgaggaagaaaaaaggcattttggtttatattttgtttatttgatattcaaatgtccaacgatcctctc  23117800                                             <---------AHL20(2)   <---------AHL20(2)                                           <---------YAB1        <---------AHL20(2)                                         --------->AHL20(2)  <---------AHL20(2)   --------->ARR14(2)                                         --------->ATHB51    --------->AHL20(2)--------->ANAC58                                  ------->TEIL             --------->TOE2(3)   --------->ANAC58                                  <---------ARR14(2)    ----------->RAV1(1)    --------->ANAC46                                  --------->ARR14(2) --------->ANAC58 <---------ARR11(3)             <---------YAB1    --------->ANAC58      --------->ANAC46 --------->ARR11(3)     --------->TOE1(3)         --------->ANAC46      --------->ANAC58--------->RVE1(1)       <-------   <---------TOE1(3)           --------->ANAC58  --------->ZAT6  --------->AHL20(2)          <-------   tagctaagcttagctataattcaatgtttgaacacgaatcccattattttaacacaaacaacattaattaaatatcgtctcaaggaacttcacttccttg  23117900                                                                                                -----                    ----------->RAV1(1)                                                        ------                   --------->ANAC46                                                            <-----                 --------->ANAC58                                               --------->WOX13(1)        --------->TOE2(3)--------->ARR14(2)                                 ----------->GT1    ------       <---------ANAC55(2)                         <<<<<<<<<TBF1           --------->DAG2      ------       --------->ANAC55(2)                     <-----------GT1         <------NtERF2          <------      <-------TEIL *TSS  <---------ARR14(2)   <<<<<<<<<<GT-3b         --------->LBD16    <---------ICU4  <---------ICU4 --------->ANAC46          <------------------------ANAC81---------->DOF2--------->YAB1 ----------->TBP --------->ANAC58    <---------ARR11(3)              --------------->AGL15   -------- --ANAC58      <-----------GT1       --------->ARR11(3)              --------->LBD16    --------->ICU4 --ANAC58<---------MYB52(1)         <---------CCA1(2) <<<<<<<<<TBF1 <---------LBD16--------->YAB1  --   tccataaatacgttatttcacaccacatatactcatctatatctctatttttcttcttcttctctctctcgccggaaaaagtaaatcaaaatgatcaccg  23118000                                                                                   <---------ARR14(2)                                                                                   --------->ARR11(3)                                                                                   ---------->TaMYB80                                                                                <---------ANAC46                                                                              <---------MYB46(3)                                                                             <---------ANAC46                                                                             --------->ALFIN1                                                                           --------->MYB55(2)                                                                           <---------MYB46(3)                                                                          <---------AtMYB61                                                                          --------->ALFIN1                                    <----------DOF2                       <---------DEAR3(1)                                  ------>NtERF2                        <---------DEAR3(1)     -------          <---------TOE1(1)       <---------RAP2.6(3)                 --------->SPL7<----------TaMYB80     <---------------AtSPL8     <------NtERF2                         <---------ZAT14      --------->MYB52(1) ---->LBD16                     --------->RAP2.3(1)                <------MYB83<------NtERF2  <------ --->DEAR3(1)                  ------>NtERF2                       <------MYB46(1) --------->ARR14(2) ----ATERF1(2)             <---------AtMYB61      <---------ARR11(3)  --------->ZAT14     <---------ALFIN1 --->DREB2C(2)             <-----------RAV1(1)    --------->ARR11(3)<---------SPL7 <---------KAN4(2) --->ATERF1(2)          <---------ARR14(2)       --------->YAB1    <---------DEAR3(2)     --------->ANAC46 ---LBD16 <---------TOE2(1)----------------------->TaNAC69(2)     --------->MYB59  <---------ARR11(3) ->MYB52(1)          <---------RAP2.6(2)        <---------YAB1    --------->MYB52(2)--------->GLK1(1) -------->DOF2      <---------At4g35610 --------->ANAC46          --------->MYB46(2)--------->KAN4(1)   gcaaagacatgtacgatgttttagcggctatggtgccgctatacgttgctatgatattagcctatggttcggtacggtggtgggggatattcacaccgga  23118100                          <---------ANAC58                                    ------>ZmHOX2a(1)                          <---------RAP2.6(2)                               =========================                          <---------ANAC46                                  ------>ZmHOX2a(2)                          <---------ANAC58                                 <---------YAB1                     --------->MYB52(2)                                   --------->ARR11(3)                   <---------MYB52(1)                                     <---------ARR11(3)       --------->LBD16<-------GAMYB   <---------ARR14(2)                 --------->YAB1     <---------LBD16 <---------MYB46(3)   ------>ZmHOX2a(1)             <---------ATHB12   <--------- --------->HSFB2a(1)<-------TEIL      --------->ARR14(2)           ------>ZmHOX2a(1)   --------->AHL20(2) -->LBD16         <---------MYB52(1)<---------MYB46(3)        <---------At4g35610     <---------ATHB12 ---SPL7     <-----------GT1      <---------LBD16  <----------DOF2 ================HOX2a_HOX2a<------   ccaatgttccggtataaaccggttcgttgcggttttcgcggttcctcttctctctttccatttcatctcctccaatgatccttatgcaatgaattaccac  23118200                                             <----------DOF2                                        <---------ALFIN1                                       --------->ZAT14                                       <------NtERF2                                       <---------ZAT18                                       ------>NtERF2                                      --------->RAP2.6(2)      <---------ZAT2                  --------->DEAR3(1)      --------->At4g35610          --------->ANAC46      <---------At4g35610          <---------DEAR3(1)                    --------->YAB1          ---- ------>ZmHOX2a(1)                ------>ZmHOX2a(1)           <---------CCA1(2)       ------->TEIL =======HOX2a_HOX2a         <---------MYB52(1)          --------->ANAC58 <---------ICU4--------->ANAC46 --GT1--------->ZAT2 ---------->DOF2 --------->RAP2.3(1)--------->ANAC58<---------ATHB12   --------->GLK1(2) ---ALFIN1<---------GLK1(2) --------->DOF5.7(2)  <----------DOF2  <----------DOF2  --------->AtLEC2<-   ttcctcgctgctgattctcttcagaaagtcgttatcctcgccgcactctttctttggcaggcccgtctctttcaataatctctctatgcacataatctat  23118300          <---------YAB1          <---------AtMYB61       --------->YAB1                                     --------->YAB1     --------->ANAC55(2)   <---------WOX13(1)                                        ----------->GT1     <---------ANAC55(2) <---------ICU4     <---------ICU4             ---------->DOF2  <-----------GT1 ----->YAB1      --------->ZAT18 --------->ICU4           --------->ARR11(3)       <---------ZAT14 --------YAB1    <---------ZAT18 <---------YAB1<-----------GT1 <---------MYB46(3)  --------->ZAT14   cttcattaagtgatggtagtctactagtaattgctatgatggtcaatttttactcgaaaacatattggttatcgaaagcttatagtatagtaactatgtc  23118400  Previous    Next  AGI:  At5g57090.1    Description:  EIR1 (ETHYLENE INSENSITIVE ROOT 1); auxin:hydrogen symporter/ transporter. Identical to Auxin efflux carrier component 2 (PIN2) [Arabidopsis Thaliana] (GB:Q9LU77;GB:O82810;GB:Q9SYT2); similar to PIN3 (PIN-FORMED 3), auxin:hydrogen symporter/ transporter [Arabidopsis thaliana] (TAIR:AT1G70940.1); similar to PIN1 (PIN-FORMED 1), transporter [Arabidopsis thaliana] (TAIR:AT1G73590.1); similar to PIN4 (PIN-FORMED 4), auxin:hydrogen symporter [Arabidopsis thaliana] (TAIR:AT2G01420.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN70111.1); similar to auxin efflux carrier protein [Medicago truncatula] (GB:AAM55298.2); similar to unnamed p Range:  from: 23117919    to: 23121961    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version