Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      <---------DEAR3(2)                                                                  <------NtERF2                                                                  --------->ATERF1(1)                                                                  --------->DEAR4(2)                                                                 <---------RAP2.3(1)                                                                 <---------ERF1                                                                 ------>NtERF2                                      <---------At4g35610        <---------ATERF1(1)                                      --------->At4g35610        <---------RRTF1(1)                                 --------->O2                    <---------RAP2.6(1)                                 <---------TGA1a                <---------DEAR3(1)                                 --------->TGA1a                --------->DEAR3(1)                      <---------HSFB2a(2)                      --------->ERF1                       <                      --------->HSFB2a(2)<------ZmHOX2a(1)     --------->RRTF1(1)               -----                 ===============================HOX2a_HOX2a    --------->ATERF1(1)         <---------                 ===============HOX2a_HOX2a                    --------->RAP2.6(1)      --------->MYB46(2)                 <------ZmHOX2a(2)  <-----------RAV1(2)        --------->RAP2.3(1)      <---------MYB46(3)                --------->ARR14(2)--------->TOE2(3)           <---------DEAR4(2)        --------->MYB52(2)                <---------ARR11(3)<-----------HVH21          --------->DEAR3(1)         --------->MYB111(1)                --------->ARR11(3)<-----------TGA1          --------->DEAR3(2)          ----------->GT1               <------ZmHOX2a(1) <---------bZIP60(1)        --------->MYB46(3)         <---------MYB55(1)           <---------At4g35610   --------->bZIP60(1)      --------->ARR14(2)           <--------P----           --------->At4g35610   <---------O2             <---------ARR14(2)          <---------MYB52(1)           --------->ZAT2      --------->MYB52(1)        <---------SPL7              --------->LBD16- ---HVH21--------->YAB1  <------ZmHOX2a(1) --------->At4g35610<---------ATERF1(1)  <---------LBD16<--   tgtttgcacaatcagcaggatcatcgaggagagtaacgtcagaggagctacagagatgccgaaccggcgccggtttaagaaactctccggtagttacaac  23091700            --------->AGP1            <---------ARR11(3)            <---------ARR14(3)            --------->ARR11(3)            --------->ARR14(2)            <---------ARR14(2)                                                             --------->AtMYB61           <---------GLK1(1)                                                               --------->ANAC46 <------NtERF2                         <---------ARR14(2)                               <-----------GT1 ---------SPL7------>ZmHOX2a(2)        --------->ARR14(2)                         --------->DAG2 ---->ANAC46--------->ARR14(3)         --------->GLK1(2)                      --------->ANAC58<------ --GT1     --------->GLK1(1)          <---------GLK1(2)                       --------->ANAC58------- --->GAMYB----------->ARR10         <---------YAB1      ----------------------->TaNAC69(2) <---------ALFIN1 -------->LBD16       ----------->RAV1(1)  <---------At4g35610              ------>NtERF2 --------->MYB46(3) -------LBD16<------ZmHOX2a(2) <---------ICU4    ---------->DOF2           --------->DEAR3(1)--------   gccggaagggaagagatcttcttccaccagaaaacattacgattctgctatcaaaggcattgagactctccaagtctccgacgaaaggtttcaccaccac  23091800                                   --------->ARR14(2)                                   <---------ARR14(2)                                <---------ANAC46           <----------DOF2              --------->ARR14(2) <-------TEIL                   <---------ANAC58          <---------ANAC58              <---------ARR14(2) ---ALFIN1                      <---------ANAC58          <---------ANAC58         ----------->GT1 -->AtMYB61             ---------->DOF2             <---------AHL20(2)           ----------->GT1 ->MYB46(3) --------->MYB46(3) ---------->ID1   <----------DOF2                --------->CCA1(2)   <-   tgatacatcatccatccatcgcttagcaaagttgtcgtatttgttcagagctttttatttgctttcgactctatattggagaaacgagaaaatttgctga  23091900                                                                 <---------AHL20(2)                                                                 --------->AHL20(2)                                                      --------->LBD16                                                     <---------ANAC46                                                    <---------LBD16              <---------AtMYB61      ----------->RAV1(2)        --------->AHL20(2)            <----------DOF2   <---------YAB1        <---------ZAT14           <---------ANAC58 <---------ICU4       <---------At5g28300           <---------ANAC58--------->ICU4    <----------DOF2    <---------AHL20(2)             ------ --------AHL20(2)    <-----------GT1 <---------At4g35610  ----------->GT1                  ----------   tttttttttgtttgctttggttttttctaatttttattcatctggttcttttactgcggagggaaattaaattcagtgtttggaattggaacatcgtata  23092000                                                                --------->ZAT14                                                                <---------ZAT14                  ----                                                              --------->ANAC46                  -----                                                           <---------ZAT14                <--------ZAP1                       --------->ARR11(3)                  --------->ZAT14               ----------->GT1 ----->TBP             <---------ARR11(3)               <---------ANAC58            --------->MYB52(1) ->GT1       --------->ICU4            <------------CBF <---------ANAC58      ----------->GT1*TSS<---   tatagttttttagtaatactgaaaatgtcttcttcagtagaaattgttcatgttattttcgttcactgcatagtgatggaatgaaaaaacggggtcaaat  23092100                                                                             ------>NtERF2                                                                            --------->ANAC58                                                                            --------->ANAC58                                                                           --------->RAP2.6(3)                                                                       <---------O2                                                             <---------MYB52(1)                                                        <-----------GT1===========================bZIP_DOF                     ----------->GT1                  <---------AHL20(2) ----------->HVH21    ------>ZmHOX2a(1)       ----------->GT1<------NtERF2                --------->ARR11(3)  --------->O2          -------- ----->AHL20(2)     <----------ID1                 <---------ARR11(3)  <---------TGA1a     ---------- ---->AHL20(2)  --------->DAG2                   <---------YAB1        --------->TGA1a <----------DOF2 ------AHL20(2)---------->DOF2                   <---------TOE2(3)--------->ZAT14    ---------->ID1   taatagaagaagtaatataaagggggcaaaatgcaatacacatgaagtattaagattttatccattacttcacacatgacgcccttcgtctttttcctta  23092200                             <---------HSFB2a(2)                                       <---------MYB52(1)                             --------->HSFC1(1)                                     ------>ZmHOX2a(2)                             --------->HSFB2a(2)                                   <------ZmHOX2a(2)                             <---------HSFC1(1)               <------ZmHOX2a(2)   --------->AGP1                       <---------------AGL15       ----------->GT1                --------->ARR11(3)                       --------------->AGL15   <---------ARR14(2)                 <---------ARR11(3)                      <---------ANAC58         --------->GLK1(2)                  <---------ARR14(2)                      <-----------------AGL1   --------->ARR14(2)             --------->LBD16                      <---------ANAC58         ------->TEIL  <---------ARR14(2)   --------->ARR14(2)                   <---------ZAT14     <---------CCA1(2)     --------->ARR14(2)  <---------GLK1(1)            --------->At4g35610    --------->TOE1(3)     <---------LBD16     --------->HSFB2a(2) ->TOE2(3)  <---------At4g35610    --------->TOE2(3) <--------P              <---------HSFB2a(2) >ID1  ------>ZmHOX2a(1)    <---------LBD16   <---------CCA1(2)------>ZmHOX2a(2) --------->GLK1(1)   ttctttctcctctcagaagagtttacttgttctggaaccctaaatctcgaatctggtaactcggatccgataaatcgttccagagatctgttacttctct  23092300                                --------->ARR14(2)                                <---------GLK1(2)                                <---------ARR14(2)                          ------>ZmHOX2a(2)                         <------ZmHOX2a(2)                         <---------GLK1(1)                   <---------ANAC58                   <---------ANAC58          <---------MYB52(1)<---------LBD16                                      <---------ANAC58       =======================HOX2a_HOX2a                                        <---------ANAC58       ------>ZmHOX2a(2)--------->GLK1(2)                                    <----------DOF2      <------ZmHOX2a(2) <---------ARR11(3)                                   <---------DAG2      ========================HOX2a_HOX2a                                  <---------At4g35610     --------->ARR11(3) <-----------ARR10                           --------->ARR14(2)     --------->ARR14(2) <---------ARR14(2)                          <---------ARR11(3)     <---------ARR11(3) --------->ARR14(2)                          <---------ARR14(2)     <---------ARR14(2) --------->ARR11(3)                          --------->GLK1(2)     --------->GLK1(2) <------ZmHOX2a(1)      --------->LBD16       --------->ARR11(3)             --     <---------AGP1<---------ANAC46         <---------LBD16        <---------GLK1(2)       <---------YAB1   attcaaggatctgttatcggtgcgaggatctacggattcttctgttcgcgcataatcggtgagtcttaagaatcttcagcttttcgtttgattttgattt  23092400            ------>ZmHOX2a(2)            =============HOX2a_HOX2a        ----------->HVH21       ==================HOX2a_HOX2a                                --------->ARR11(3)       ------>ZmHOX2a(2)                                       --------->TOE2(3)      <------ZmHOX2a(2)                                        --------->TOE2(2)      ===================HOX2a_HOX2a                           --------->TOE1(2)      --------->CCA1(2)                                        --------->TOE1(3)     --------->ARR14(2)                                     <---------ARR14(2)     <---------ARR11(3)                                     --------->ARR14(2)     <-----------ARR10                                   <---------ANAC55(2)     <---------ARR14(2)                                  --------->ANAC58     --------->ARR11(3)                 XXXXXXXXXXXXXXXXXXXXX>MIR4221     <---------AGP1            <---------DAG2            --------->ANAC55(2)     --------->AGP1            <----------DOF2           --------->ANAC55(1)                     <---   ----------->ARR10        <-----------GT1   <---------MYB52(1)    <---------ARR11(3) --------->ANAC58  <---------TOE1(2)   <---------ZAT6   <-----------GT1   --------->ANAC58              --------->ANAC58 ------->YAB1     ------>ZmHOX2a(1)   <-----------GT1    --------->ANAC46         ------>ZmHOX2a(2) -   atcgtaagatctgatcggtccttagtgtaatcactttatttttcccctgttaagttcacgcgtaacctaagaacttgaatttgatctgtaagctagattt  23092500                                                      <---------TOE2(3)                                        <---------ANAC46                              --------->ANAC55(2)        <---------ANAC46                <---------ANAC58    ----------->HVH21         <---------ANAC55(2) --------GT1                            <---------ANAC58 ------->TEIL            ---------->DOF2   <- -------->TOE2(3)         <---------HSFB2a(2)     <----------DOF2   <---------HSFB2a(2)  ------->TEIL   aaccttggttttgtgtattgagttcgttctcggtggaaattggcttatggtgatttatggatgtgacattttggaagtgtttacaaagacgtatttagaa  23092600  Previous    Next  AGI:  At5g57015.1    Description:  CKL12 (Casein Kinase I-like 12); casein kinase I/ kinase. similar to CK1 (casein kinase 1-like protein 1), casein kinase I/ kinase [Arabidopsis thaliana] (TAIR:AT4G26100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65329.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 23088323    to: 23092069    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g57020.1    Description:  NMT1 (N-MYRISTOYLTRANSFERASE 1). Identical to Glycylpeptide N-tetradecanoyltransferase 1 (NMT1) [Arabidopsis Thaliana] (GB:Q9LTR9;GB:Q9M6E3); similar to N-myristoyltransferase-related [Arabidopsis thaliana] (TAIR:AT2G44175.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45669.1); similar to Myristoyl-CoA:protein N-myristoyltransferase [Medicago truncatula] (GB:ABN09113.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65324.1); contains InterPro domain Acyl-CoA N-acyltransferase (InterPro:IPR016181); contains InterPro domain Myristoyl-CoA:protein N-myristoyltransferase; (InterPro:IPR000903) Range:  from: 23092093    to: 23094127    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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