Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <---------ANAC58                                <---------ANAC58                                <---------ANAC46                                   <---------ARR11(3)                                <---------ANAC55(1)                      <-------MYC3                                <---------ANAC55(2)                      <-------PIF5                                <---------YAB1                           ------->PIF5                       --------->ALFIN1                                  <-------MYC4                      <-------PIF5                                       ------->MYC2                      ------->PIF5                                       <-------MYC2                      <-------MYC3                                       ------->MYC3                      ------->MYC2                                       ------->MYC4                      <-------MYC2                                       ------->PIF4                     --------->ANAC55(2)                                --------->O2  <----------DOF2                     <---------O2                                       <---------ANAC58                     <---------TGA1a                                    <---------ANAC46            -                     --------->O2                                       <---------ANAC55(2)         -                     <---------bZIP60(2)                                --------->TGA1a           ---                     <---------ANAC58                                   --------->ANAC55(2)       ---                     <---------ANAC55(2)                    <---------MYB46(3)     --------->ARR11(3)                     <---------ANAC46                      <---------WOX13(1)  --------->MYB52(1)----                     --------->TGA1a                     <---------ICU4 <---------ANAC58 <---------At5g28300                     <---------ANAC58                    -------->HAHB4 =============================                    ------------>OsbHLH66                --------->ATHB12<-------PIF4------>ZmHOX2a(2)                  ----------->HVH21                     --------->ICU4  =========================bZIP_DOF                 <-----------HVH21                      <---------YAB1  <---------TGA1a <-----------GT1                <---------bZIP60(1)                   <---------ICU4    <---------bZIP60(2) ---------                --------->bZIP60(1)                  --------->ICU4     <---------O2<------ZmHOX2a(2)       ========================bZIP_DOF            --------->YAB1      ------------>OsbHLH66<--------       ---------->DOF2------->MYC3    <---------ANAC46--------->YAB1<-----------HVH21<---------ICU4--   gacaaaactaaaagaatgaagtcacgtggggattacgtttgagtatatttgactcataatgatggatggaagtcacgtgccaaacgatctttaccgctca  23087900          <---------CCA1(2)        --------->ANAC46       ------->MYC2       <-------MYC3       <-------MYC2       ------->MYC3      --------->ANAC58      --------->ANAC58       --------->ANAC55(2)  ------->GAMYB              --------->ANAC58 --------->ANAC46            --------->ANAC58 --------->ANAC58            <---------ANAC46 --------->ANAC58         ----------->TGA1 ----->MYB46(1)           ----------->HVH21                                            --------->AHL20(1) ----->MYB83            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                         <---------AHL20(2) ------>AtMYB61         <------MYB46(1)                                               --------->AHL20(2) ------>MYB46(3)        <------MYB83                                                --------->YAB1 ----->MYB46(3) ----------->HVH21         --------->ANAC46                   <----------DOF2        < =========MYC_MYB  --------->ANAC58 <---------ANAC58                      <-----------GT1 --------->AHL20(2) >At4g35610 --------->At4g35610  <---------CCA1(2)                       <-----------GT1  <---------AHL20(2) -At4g35610 <---------At4g35610  --------->GLK1(1)<---------ARR14(2) <---------AHL20(2)--------->AHL20(2) ------->MYB52(1)  --------->ANAC58 <---------ANAC58                 --------->AHL20(2)<---------AHL20(2)   ccaacggcacgcgtagctctcacgcttggtgacgcatttcttactcgtagccaatcccaattttctcacatttttttaacttttaaaaataatttaaaac  23088000                                                                         --------->AHL20(2)                                                                         <---------AHL20(2)                                                                        --------->ICU4                                                                   ----------->GT1                                                                   --------->ANAC58                                                                   --------->ANAC55(1)                                                                   --------->ANAC55(2)                                          --------->LBD16          <---------ANAC55(2)                                          ----------->GT1         <-------TEIL                                        <---------LBD16        --------->YAB1          <---------YAB1         ------>MYB46(1)              <---------YAB1   <---------ANAC58              ------>MYB83              <---------MYB52(1)   <---------ANAC58            <---------MYB59   <---------AHL20(2)--------->ANAC46 ---------REM1(2)            --------->MYB52(1)  --------->AHL20(2)--------->ANAC58                 -   tctacgcgtgttataagtccaaattccaaaataccgaactaaaccggaaaattaaaaaatcgttatgatacgtaattaatatgagttgatgaaatttaag  23088100                                                                                            ---------                                                                                            <--------                                                                                           <---------ARR14(2)             --------->ATHB12             <---------ANAC55(2)                              --------->ARR14(2)          <---------ANAC55(2)             --------->ANAC55(2)                            --------->LBD16          --------->ANAC55(2)        --------->YAB1                                    <---------LBD16      --------->YAB1          <---------TOE2(3)                                      <-----------GT1     <---------YAB1     <---------ANAC46--------->MYB52(1)                      <---------AHL20(2)  <---------YAB1  --------->ARR11(3)>>>>>>>>>MYB98                              --------->AHL20(2) ---------->GT1<---------WOX13(1)  <-----------GT1                             <---------AHL20(2)   tatggtgataataagtgattgatattgggtttaagtttaacataacgtattagtttgaaaatttgaaacgatttatagttatttatttaaccggatttcg  23088200                     --------->ARR14(2)                     <---------ARR14(2)          ----------------->AGL1                     --------->TCP20             <---------ANAC46              <---------GLK1(1)      <------ZmHOX2a(1)              --------->CCA1(2)    <---------TOE2(3)               ---------->DOF2              --------->GLK1(1)--------->At4g35610            <----------ID1             <---------ARR14(2)<---------At4g35610          ----------->GT1             --------->ARR14(2)--------->ZAT2    <---------ANAC55(1)    ---------->DOF2       <------        <---------LBD16        <---------ZAT2  <-----------GT1----------->GT1              ---------- >GLK1(1) --------->LBD16  --------->REM1(2)<---------ICU4---------->DOF2             ---------->DOF2 -GLK1(1)<---------LBD16<---------ANAC46 --------->YAB1  <------ZmHOX2a(1)    <------ZmHOX2a(1)  ----   gtttaataaaaccgggatatgtggaaccgtgtaagctgaggaataatagttacctgtaaggaaagagaaaaaaggaaagaggagagaagaaagaaaagga  23088300                                                                 <---------ICU4                                                        <----------DOF2                                                       <---------DAG2                                                    <-----------GT1                      <---------ANAC46                                                 --------->TOE1(3)   <-----------GT1     <---------ANAC58 ----ID1               *TSS                  ---------->DOF2 --------->AHL20(2)          <---------ANAC58 >DOF2   <----------DOF2                 --------->REM1(1)   <---------AHL20(2) <-----------GT1 ------>DOF2      <---------ALFIN1    --------->TOE2(3)--------->TOE2(3) ------>ZmHOX2a(1)  ---------   aaagacccaaactttgagaaacaccttcattctcttccttccttcatcaaagcttaaccttttttaatttttatcctcgttttttcaattcgcgtgaaga  23088400                                                           ====================HOX2a_HOX2a                                                          ==================HOX2a_HOX2a                                                          =====================HOX2a_HOX2a                                                          <------ZmHOX2a(2)                                                         <---------ARR14(2)                                                         --------->ARR11(3)                                              <----------DOF2                                           --------->ARR14(2)                                           --------->GLK1(2)--------->TOE1(2)                                           <---------ARR11(1)           <------ZmHOX2a(1)                                           <---------ARR14(2)        <------ZmHOX2a(1)                                           ------->TEIL  --------->ARR14(2)                              --------->GLK1(2)          <---------ARR11(3)                              --------->ARR14(2)      <---------HSFB2a(2)                 --------->DAG2         --------->ANAC55(2)=================HOX2a_HOX2a                ---------->DOF2         <---------ANAC55(2)------>ZmHOX2a(2)              --------->ARR11(3)        <---------YAB1--------->HSFB2a(2)--------->ALFIN1    <------- >REM1(2) ---------->DOF2     <---------ARR14(2)     ----------------->AGL1             <---------At4g35610   gacagagagagagaaagataaagctagaagagaatcgacattacgaatcttttgttccagatcgtgagagaggaggagttggaagaatgaagatgactat  23088500              ------->GAMYB                                                  --------->LBD16              --------->TOE2(3)                                      <---------ANAC46---------->DOF2              --------->TOE1(3)                                     <---------At4g35610            ------>MYB83           <---------ANAC58              <-------GAMYB<---------MYB52(1)            ------>MYB46(1)        <---------ANAC58             <---------ANAC58    <XXXXXXXXXXXXXXXX   <----------DOF2           --------->AHL20(2)   <-----------------AGL2   <---------LBD16    <------ --YAB1     -------->P       <---------AHL20(2)<---------GLK1(1)<---------ANAC58<---------MYB46(3)   tgggtctttgttccaaccctaattttgcagattaatttcgtttttgttgatttctgttttgggtttgcgttgctgattccggtggattaaagggttcttt  23088600                                                                    --------->ALFIN1                                                                    <-------GAMYB                                                                   <---------MYB46(3)                  <------MYB83                                     <----------DOF2                  <------MYB46(1)          <---------AHL20(2)     <---------ANAC46    <---------ZAT18                        --------->AHL20(2)    <------NtERF2    --------->ZAT18                       --------->AHL20(2)   <---------DEAR3(1)       --------->YAB1    <---------ZAT14          <---------LBD16           <----------DOF2   <-------GAMYB <---------YAB1 XXXXXMIR393A/B   <---------ANAC46        --------->YAB1       <---------RAP2.3(3)  --------->ICU4 <- ----DOF2    <-----------RAV1(1) ---------->DOF2 <-----------GT1<---------ORA47(2)  <---------YAB1 <-   ttggagagcacaaatttgttgggtttttttttggggaaagagaattaaaattttctcctttagagtcggcgtttgggttgagagagattattatagtttt  23088700                                                                                                  ---                                                                                                 <---                                                                                                <----                                                                    <------NtERF2               -----                                           --------->ALFIN1        --------->LBD16              -----                                         --------->ALFIN1          <------NtERF2                >>>>>                                       --------->O2                ----------->GT1              >>>>>                        --------->ICU4 <---------TGA1a            --------->RAP2.6(2)           -----         --------->GLK1(1)             --------->TGA1a           <---------LBD16               ------         <---------GLK1(1)             <---------O2             ------>NtERF2       <-------TEIL>>>>> --------TOE1(3)        <---------YAB1 <---------ANAC46--------->ARR11(3)        <---------MYB46(3) --------TOE2(3)   ----------->GT1  --------->ATERF1(1)<---------ARR11(3)        ----------->GT1>>>>>   tagggttttggatttctgaattggtgattatcgatggagcctcgtgtgggaaacaaatatcgtctcggccggaaaattggaagcggttcatttggagaga  23088800  Previous    Next  AGI:  At5g57015.1    Description:  CKL12 (Casein Kinase I-like 12); casein kinase I/ kinase. similar to CK1 (casein kinase 1-like protein 1), casein kinase I/ kinase [Arabidopsis thaliana] (TAIR:AT4G26100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65329.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 23088323    to: 23092069    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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