Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                          --------->ANAC58                                                   --------->ANAC58                       --------->ANAC58                 ---------->DOF2                   --------->ANAC46             <---------ANAC46    -    --------->ANAC58                     --------->AHL20(2)    <---------ARR14(1)        <---------LBD16    --------->ANAC58 <----------ID1   --------->YAB1     ----------->HVH21    <---------ANAC46    <-- ----DOF2   --------->MYB46(3)   <-------TEIL      --------->ANAC58        <-----------RAV1(1)-------   gtgagcaagtaagaacaaacaaaggaacaaaaacattcattcattatatcaagacgacactgaccgtatcaaacattgtgttgtgtaatagcacggagag  23079100                                         --------->ANAC58                                         --------->ANAC46                               --------->ANAC58        --------->ATHB12         <------ZmHOX2a(2)     --------->ANAC58        --------->YAB1 ------>NtERF2              <---------ZAT14           <---------YAB1 -------->ANAC58            --------->ZAT14        ------>ZmHOX2a(2) -------->bZIP60(2)         --------->ZAT18        <-------TEIL                                     - -------->ANAC46            <---------ZAT18       <------ZmHOX2a(2)            --------->GLK1(2)   <- -------->ANAC58  <---------ICU4 --------->ANAC46<---------ARR14(2)           --------->GLK1(1)  ---- -------->O2      --------->ATHB12       --------->ANAC58                 ----------->GT1      <----- -------ALFIN1   --------->ICU4<---------ALFIN1  ------->TEIL       --------->HSFB2a(2)      -------- -->GLK1(1)      <---------YAB1--------->ANAC46  --------->ARR14(2) <---------HSFB2a(2) <-----------GT1   ccacgccatggatcatttcatcattggtactgcacacatcaagacggaatggatccatgataggcctagtctcgaaccgaaaatccaatttatcccaatc  23079200        --------->TOE2(3)        --------->TOE1(3)                                                                          --  <---------ANAC55(2)                                                                           -----  --------->ANAC46                   <---------------AGL15                                      <----  --------->ANAC58                   --------------->AGL15                                     ------  --------->ANAC55(2)              --------->At4g35610                                         ------  --------->ANAC58     ----------->RAV1(1)         <---------ANAC58                     <---------ATHB12 -------->YAB1   --------->ANAC58  ----------->GT1 <---------ANAC58                   --------->WOX13(1) --------ATHB12  --------->ANAC58  <---------At4g35610<---------ZAT2                <---------YAB1<-- ----->WOX13(1)  --------->ANAC46<---------ZAT18 <---------ARR14(2)         <---------AHL20(2) ------ ----ATHB12    --------->AtMYB61 --------->ZAT18 --------->ARR14(2)        --------->AHL20(2)  <----- ->WOX13(1)---------->DOF2--------->YAB1        <---------CCA1(2)          <---------AHL20(2)--------   aatcacgaaaccctaaaccacacaacaacaataagtgagctaaaattagcatatcgtgctggtttcaaaaaccaaaatttttttttatcaatgagtagat  23079300                             ------>MYB46(1)                             ------>MYB83                           <---------MYB59                                                          - ------->LBD16             --------->TOE2(3)                                                        < ---->CCA1(2)        --------->AHL20(2)             --------->ARR11(3)                              < --ZmHOX2a(2)        --------->YAB1                 <---------ARR11(3)                            <-- --->AGP1            <---------AHL20(2)             --------->ARR14(2)                           <--- --->ARR14(2)     <--------HAHB4                    --------->ARR11(1)                           <--- ---------RAV1(2) <---------ICU4        ----------->GT1          <----------DOF2                 <--- --->ARR11(3)     --------->ATHB51   --------->ALFIN1--------->CCA1(2)                         <----- ----ARR14(2)    --------->ICU4    ------>ZmHOX2a(1)<---------ARR14(2)            <---------ZAT6----- --->ARR10       <---------YAB1    <-----------RAV1(1)    ------->TEIL      <---------ZAT6    <------   ccaggtttcaatcgaggtcataattaaaacctaattcctgtggggagaattgaagatatgtacctcgctcttatggtactggtagtataagatgtactgt  23079400                                  --------->GLK1(1) --------->ANAC58                 <---------GLK1(1) --------->ANAC58              --------->LBD16 --------->ANAC55(2)      --------->GLK1(1) <---------ANAC55(2)      <---------GLK1(1) -------->SPL7           ------->TEIL --------->HSFB2a(2) ---------TOE2(2)        <---------ARR14(2) ---------TOE1(2)        --------->ARR14(2) -------SPL7             <-----------ARR10            <---------MYB52(1) ------ANAC46            <---------ARR11(1)          <---------RAP2.6(3) ------ANAC58           <---------ARR14(1)          --------->ANAC46 ------ANAC58           <---------CCA1(2)           --------->RAP2.6(2)           -------->P ------HVH21          <---------ANAC58<---------HSFB2a(2)    <---------GLK1(2)    ------>MYB46(1) ---------->AtSPL3    <---------ANAC58<---------LBD16--------->At5g28300          ------>MYB83 -----RAV1(1) <---------SPL7 <---------LBD16  --------->ALFIN1               <-----------GT1        -   cgtacgtattcatcgtcgtaagggtcgtatctccggagttctcggaatgtgtagccgtaacttgattcgctggagaatttctccaacctcggcttcttcc  23079500                            --------->ANAC46                           --------->DEAR3(1)                          --------->DEAR3(2)                          --------->MYB46(3)                        --------->MYB52(1)                      <---------MYB52(2)                      --------->MYB46(3)                <---------ETT(2)           --------->TOE1(3)             --------->DEAR3(1)         --------->ARR14(2)       <---------ARR14(2)------->TEIL   <---------ARR14(2)       --------->ARR14(2)--------->MYB52(1)--------->TOE2(3)      <---------GLK1(1)------->GAMYB  <---------DEAR3(2) ---------->GT1 --------->ETT(2)     --------->ETT(1)<---------At4g35610    ---------->DOF2   gaatgtgaaaatcccccgtcgacaacgaaccggccatggtcggaaccctaaattctgcttctcagcgagaacaagagacaaagtgagccaagaagttttt  23079600                                  <-----------HVH21                                 ----------->HVH21                                ------->MYC3                                -------->ABF1                                ------->MYC4                                <-------MYC3                                <-------MYC2                                <-------MYC4                                ------->MYC2                               --------->ANAC55(2)                               <---------O2 <---------ANAC58                               <---------TGA1a                               --------->O2 --------->ANAC55(2)                        --------->TOE1(3)   <---------ANAC58                   --------->At4g35610      <---------ANAC55(1)                   <---------At4g35610      <---------ANAC55(2)            --------->DAG2     --------->TGA1a<---------CCA1(2)           ==============================bZIP_DOF                                                ----           ---------->DOF2     <---------ANAC55(2)  <---------ARR14(2)      --------------->AGL15<---         <------ZmHOX2a(1)     ==========================================bZIP_DOF<xxxxxxxxxxxxxxxxxxx        --------->LBD16 --------->TOE2(3)   <---------ANAC46                <---------------AGL15----      <---------LBD16 ------>NtERF2      --------->ALFIN1     <----------DOF2  <---------YAB1    <---   ======================================bZIP_DOF--------->YAB1        <---------ANAC58     <--------   <----------DOF2----------------------->TaNAC69(2)--------->ARR14(2) <---------ANAC58  >>>>>>>>>>>>   tttttctttcaggaaaaggaatgctgccttaacacgtgtcagagtggcgtatcatatactgggcctttcatgggcctgcttatatttgtaaacccattgt  23079700                                                                <---------ICU4 ----->ZAT14                                                   ------>ZmHOX2a(1) ------ZAT18                                                  <---------MYB59               <-------- xxsmallRNA(si3)       <---------CCA1(2)                  <----------DOF2                 <----------DOF2 ----->ZAT18     <-------TEIL                  <---------ARR11(3)                   --------->AHL20(2) ------ZAT14  <---------ANAC58              >>>>>>>ZML2  <---------ANAC58           <---------AHL20(2) ----CBF      <---------ANAC58     <------------CBF      <---------ANAC58      ------------>CBF   <-- >>>>>LFY    <-------TEIL       ------------>CBF  <----------DOF2  <-----------GT1 <---------ATHB12   gtactcttgttgatgtgcgttcgtcttatcttatcccaattgagttctagttctttgtgtctttcctaatttccctactattccaattaattctttatga  23079800                                                                             <--------P                                                                            <---------ANAC58                                                                         <---------ANAC46                                                                   <---------AHL20(2)                                                                   <---------ARR11(3)                                                                   --------->ARR11(3)                                                                   --------->AHL20(2)                                                                   --------->AHL20(1)                                 --------->At4g35610          <---------YAB1<---------ANAC46                                 <---------At4g35610         --------->TOE2(3)<---------MYB46(3)                           ---------->DOF2                  --------->YAB1  <-------GAMYB -ICU4 --------->YAB1   --------->At4g35610      <----------DOF2   <---------AHL20(1) --------DOF2           <---------At4g35610 ------->TEIL   <---------ATHB12 <---------ANAC58   cttttcaaataataccctaagttctgagctaaagcatctcacgatgaacttctttaactaaatcatcaatatattgtgggttgttcgtaacaatttttct  23079900                   <---------YAB1                  --------->AHL20(1)                  <---------AHL20(1)                  <---------AHL20(2)                  --------->AHL20(2)              --------->YAB1              <---------ICU4              <--------HAHB4             <---------YAB1                                                 ----------->RAV1(1)             --------->ICU4  <------NtERF2                               --------->ANAC58           --------->YAB1    --------------->AtSPL8                      --------->ANAC58    <---------WOX13(1)  <---------TOE2(3)    --------->ATHB12           --------->DAG2              < <---------YAB1 <---------YAB1              <---------YAB1             ---------->DOF2            <-- <---------ATHB51--------->AHL20(2) --------->ANAC46      <---------ANAC46 <----------ID1      <xxxxx   tcgataattgatatcatcattatattaaggcatcgtacaaacaattttcattgctaagttgtttgtttttgtataaagcaacaaattcccaactattgtt  23080000  Previous    Next  AGI:  At5g56990.1    Description:  similar to cysteine protease inhibitor [Arabidopsis thaliana] (TAIR:AT5G56910.1); contains InterPro domain Cystatin-related, plant (InterPro:IPR006525) Range:  from: 23078296    to: 23079537    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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