Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->TOE2(2)                 --------->TOE1(2)                ----------->RAV1(2)             <---------ANAC58                                                    --------->AHL20(1)          ------>ZmHOX2a(1)                                                     <---------AHL20(2)      --------->ARR14(2)                                        <---------YAB1--------->YAB1<--------      <---------ARR14(2)                                       <---------ARR11(3)<---------AHL20(2) ----------->RAV1(2)           --------->YAB1                  --------->ARR11(3)--------->AHL20(2) ------>TEIL <---------ANAC58 ----------->GT1       <---------MYB46(3)      --------->AHL20(2) -----------AtSPL8  ----------->HVH21              <---------WOX13(1)   ----------->GT1    --------->YAB1 ---------->AtSPL8------>ZmHOX2a(1)              --------->ATHB12--------->YAB1 --------->AHL20(2)   tgtacctgaatcctggcttcctgcgaccagtaatgaaaatagatgaagaattgattgttagtgaatatcatagtaagaaaaaataatttgaaataaaaat  23058000                                                                --------->ANAC58                                                                --------->ANAC58                                   ----------->HVH21            --------->ANAC46                              ----------->HVH21               ---------->DOF2                           --------->AHL20(1)            <---------ANAC46                     --------->MYB52(1)                  ----------->GT1                   <---------MYB52(2)               <---------ANAC46                   <---------MYB46(2)               <---------ANAC58  <---------REM1(1)<---------MYB111(1)              <---------ANAC58                 <---------AtMYB61 -AHL20(2)--------->ICU4   <---------ARR11(3)    <---------MYB52(1)     <----------DOF2          ----   ggtgttgtagtaatgcttctaactaacaatatatgacctgatagaagagacgttgtgtgtcgttaaaagcaagtctttgactctcttgtggtcgaatttc  23058100                                    ------->PIF4                                    ------->MYC2                                    <-------MYC2                                    ------->MYC3                                    <-------PIF5                                    ------->PIF5                                    <-------PIF4                                    <-------MYC4                            <---------ANAC58                            <---------ANAC58                            <---------ANAC58                          <---------AHL20(2)                           --------->ATHB12                           <-----------GT1                          <---------YAB1                          <---------AHL20(2)                     --------->ANAC58                            <---------AHL20(1)                     --------->ANAC58                     <---------YAB1<---------ANAC58                     --------->ANAC46          --------->YAB1 --------->AHL20(2)               ------ ----------->AGL15  ------->TEIL    <-------MYC3  <-----------GT1--------->AHL20(1)   --------->TOE2(3)   tacgtatggaagattgttcatgaacgccatgcttggcacatgcctaaaattataacatttttgattatatattttcttgttactaaaacataaatattgg  23058200                                          <---------------AGL15                                          --------------->AGL15                                         <-----------------AGL1                                         <-----------------AGL3        <---------ARR14(2)                                         ============================================================                --------->ANAC46         <-----------------AGL2        --------->ARR14(2)             --------->ARR14(2)          ----------------->AG    <---------WOX13(1)   <---------AHL20(2)                    ----------------->AGL1 --------->ARR14(2)         ------>ZmHOX2a(1)   --------->AHL20(2)                   <-----------GT1         <---------ARR14(2)   --------->ANAC58 ----->GT1   <---------ARR14(2)        <-----------GT1     --------->MYB52(1)        --------->ANAC58   taaatataaattgcatatacgactcaaattgatgaacaagtttacccattttggagcgggataacggattggcgatactcatggaacaagctcctagcta  23058300                                        --------------------->WRI1             <----------ID1            --------->ATHB12         >>>>>>>>>TBF1             --------->HSFC1(2)    --------->LBD16                <---------HSFC1(2)   <---------HSFB2a(2) --------->HSFB2a(1)                                  --------->At4g35610   --------------->AGL15  <-------TEIL<-------TEIL                          <---------ZAT2   <---------HSFC1(1)  <---------HSFC1(2)                                   <---------At4g35610   <---------------AGL15 --------->ARR14(2)                           --------->At4g35610   --------->HSFC1(1)  <---------HSFB2a(1)                       <---------AHL20(2)           <------   --------->HSFB2a(2) --------->HSFC1(2)       <-----------GT1 --------->AHL20(2)            ------- ==================MADS_MADS    <---------At4g35610        --------->YAB1   --------->ZAT2<-------TEIL   aacttccagaagaagaagacgaagaaggttcttcagaagcttcattgtaatatccatccattgatattaaatagctgcagctcaaaatcaaatgcatcat  23058400                                                                                                   --                                                                                                  ---                                                                                                  <--                                                          <---------AtLEC2                        ---                                                      <---------ANAC46                            ---      --------->AHL20(2)                             --------->ALFIN1                             <--      --------->YAB1                                 <-----------RAV1(1)                        -----   --------->YAB1                            <---------ANAC55(2) <---------ANAC46    <---------HSFB2a(2) ---ICU4                        <------------CBF   <-----------RAV1(1)               --------->HSFB2a(2) -->YAB1               --------->TOE2(3)----------->GT1  <-------TEIL         ---------->DOF2 <------ZmHOX2a(1)   gagattaataaaaaaaaaacatttacattagagagattgaacatgttacatatatgtggtgcatgtaatgtgtatagatgtaaaggtcgagaacgaggaa  23058500       <---------YAB1     <---------ICU4    <---------YAB1                                                                             <-----    --------->ICU4                                                                             <----- <---------YAB1                                                                                <----- --------->ICU4                                                                                <----- ------->CCA1(2)                                                                 --------->LBD16    < ------>ARR11(3)                                                            ----------->HVH21  <----- -------ARR11(3)                                 --------->TOE2(3)          --------->MYB46(3)<------ ------>ARR14(2)                                --------->ANAC58       <---------At4g35610  <-------- ------>ARR11(1)                                --------->ANAC58       --------->At4g35610  --------- -------ARR14(2)                       ---------->DOF2        ---------->DOF2 --------->MYB52(1)----- ------>ARR10           <------ZmHOX2a(1)     --------->MYB52(1)  <------------CBF    <-----------GT1   gatatgattattacttagaaggtcgaggaaaatagtaagaccaaagacaaacgtaaacacatccaaaagattgagctagcgaccggattaactggttccg  23058600                                                       <----------DOF2                                                      <---------ANAC58                                                      <---------ANAC46                                                      <---------ANAC58                                               <---------ANAC58              --------->ARR14(3)                                               <---------ANAC58              <---------GLK1(2)                                               <---------TGA1a               <---------ARR14(3)       <------ZmHOX2a(2)                       --------->TGA1a               <---------ARR14(2) ----ANAC58                                    <---------ANAC46              --------->ARR11(3) ----ANAC46                                    ===================bZIP_DOF   <---------ARR11(3) ----ANAC55(1)                                 =================================MYC_MYB ----LBD16                                     --------->O2             ------->GAMYB ------------CBF                               <---------O2          --------->MYB52(1) ----ANAC58                                  <---------ANAC55(2)     ----------->RAV1(1) ---LBD16                                 <------ZmHOX2a(2)         --------->ANAC46 -ARR14(2)                               <---------ARR11(3)       --------->YAB1 >ARR14(2)                 ------->TEIL  --------->ARR11(3)<-----------GT1 ----------->ARR10       -- ---->LBD16   <---------MYB52(1)--------->AtLEC2 --------->ALFIN1 --------->ANAC46    <------------CBF   ggtattgggatcatccgttaagaagaatgcatccatgtaagaagatcacgcgtgtggcttttttccaaacacaacagaagattttgagaattgaagatga  23058700                       --------->ATHB12                      <-------TEIL                ---------->DOF2            --------->ATHB12           <---------YAB1                                         ----------->GT1           --------->ICU4           --------->ANAC58             ----------->GT1       <------ZmHOX2a(1)            --------->ANAC58     --------->ALFIN1 ------->YAB1 <---------YAB1 <---------------AGL15     --------->CCA1(2)    --------------->AtSPL8   agaataagaggagatgattaaagcttcattgctgtattaagccagagagagagggagagatggagggagggaaaattattcgttccatatttttgttttc  23058800                      <---------YAB1                   <---------ARR11(3)                   --------->ICU4                   --------->AHL20(1)                   --------->ARR11(3)                   <---------AHL20(1)              ----------->GT1      --------->DAG2             <---------TOE2(3)    ---------->DOF2           --------->MYB52(1)----------->GT1                  ---------->DOF2          ---------->DOF2           ---------->DOF2  --------->ALFIN1              ---------->DOF2        <---------GLK1(1)      --------->AHL20(2)---------->DOF2            <------ZmHOX2a(1)             --------->GLK1(1) --   ttatttcaaaaaataaaggaaaatattaaagtggagaaaagtagagagaagaaggagcccaaaagaaagagaatgagagagagatttcagaaagagagag  23058900  Previous    Next  AGI:  At5g56960.1    Description:  basic helix-loop-helix (bHLH) family protein. similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT5G57150.1); similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT5G57150.3); similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT5G57150.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO65340.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 23055929    to: 23058400    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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