Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            -----------                                                                               <-------TEIL                                                                              <--------P  --------->YAB1           --------->ICU4                               --------->TOE2(3)  <---------TOE2(3)       <-           <---------YAB1                 ------>ZmHOX2a(2)                <---------TOE1(3)      <-- ------->ANAC55(2)<-----------GT1        <------ZmHOX2a(2)         --------->ANAC58   <---------AHL20(2) ----------------AGL1                 <---------HSFB2a(1)          <---------ALFIN1 --------->ANAC55(2) --------GT1 <---------ARR11(3) ---------->DOF2   --------->YAB1   --------->ANAC58 <---------ANAC55(2)   tacatgatcaggcatgattttaactgctaaactaaaaagaacgatcgtacaagaataacatttatacacacacacttaaggttgatatgtaattgtaaat  23008300                                                       ----------->RAV1(1)                                                    --------->ANAC46                                                    --------->ANAC58                         <------MYB83                                                    --------->ANAC58                         <------MYB46(1)                                                <---------REM1(1)              >>>>>>>>>>WRKY26 >GT1     <--------P                      <-----------RAV1(1)     ------>ZmHOX2a(2)   ---------->DOF2 --------At5g28300      <---------At4g35610  <---------MYB46(3) --------->ARR11(3)  --------->ANAC58 ---------GT1  ---------->DOF2          --------->ANAC55(2)     <---------ARR11(3)  --------->ANAC58   ttaccttgaggggttgagaaagatggagatgatcagcgtgataagtgttgttgtaggcaacatgttgatcttcttgagagttgatcaagaaagggaggta  23008400                                                                 --------->YAB1                                                                <---------YAB1                                                                --------->ICU4                                                              --------->YAB1                                                             --------->ICU4                                                             <---------YAB1                                                           --------->YAB1   <---------REM1(1) =======                                                          --------->ICU4 --------->ICU4       ------>ZmHOX2a(2)                                                          <---------YAB1 <---------YAB1      ========                                                        --------->YAB1 --------->YAB1        <------ZmHOX2a(2)                                                       --------->ICU4 <---------YAB1        ---------                                                       <---------YAB1 --------->ICU4        <--------                                                     --------->YAB1 --------->YAB1         <------ZmHOX2a(1)                                                     <XXXXXXXXXXXXXXXXXXXXMIR414     ================HOX2a_HOX2a                                                    --------->ICU4 <---------YAB1    <------ZmHOX2a(1) <------ZmHOX2a(1)     >>>>>>>>>TBF1                <---------YAB1 --------->ICU4    ===============HOX2a_HOX2a   agaggagagcgatgaaatggacgaagaagaagatgaagaattagaagggacttgatgatgatgatgatgatgatgatgatgaagcgaggaagaggatcca  23008500                                              ------>ZmHOX2a(2)                                             <------ZmHOX2a(2)                                            --------->AGP1         --------->DAG2                     <---------AGP1        ---------->DOF2         --------->ARR11(3) <------ZmHOX2a(1)              <---------ARR11(3) =======HOX2a_HOX2a<---------ANAC58         --------->ARR11(3) =======HOX2a_HOX2a<---------ANAC58    <---------MYB52(1) --------->YAB1 >ARR14(2)     <---------MYB46(3) ------>ZmHOX2a(2)      ----------->GT1                           -- -ARR14(2)    <--------P<---------AtMYB61   <---------ARR11(3)             --------->YAB1 <---------ATHB12   agaggatagaaaaagggttgttcgtgatggttttgatcttcgttaagatctatcgagtaatgaaaatttgaatccattgatgagataaacaaatgaagac  23008600                                                       ---------->DOF2                                                   <------NtERF2                                                  ----------->GT1                                                 --------->ANAC46                             -------                                                --------->RAP2.6(3)                          *TSS                                          <---------YAB1                   <---------YAB1 ---------->DOF2                                          <------ZmHOX2a(2)      --------->ANAC58    <----------DOF2           ---------->DOF2               --------->ARR11(3)      --------->ANAC58    ------>ZmHOX2a(1) -------->DOF2 ---------->DOF2           <---------ARR11(3)      --------->ANAC46  ------>ZmHOX2a(2)   acaaagagagagagaaagaaagctaagatgagagattgagagagatcatagacggcaaaaagagtccaagctatactatgtttgatcctttttaaaggca  23008700                                                     --------->ARR11(3)                                                --------->AHL20(2)          <---------ANAC58                                        <-------TEIL <---------AHL20(1)     <---------ANAC58                                    <---------AHL20(1)                      <---------ANAC46  <------                        <-------MYC3<---------AHL20(2)                      --------->ANAC55(2)            --------->ANAC58       --------->AHL20(2)<---------ARR11(3)     <---------ANAC55(2) --------->At4g35610    ------->MYC3--------->AHL20(1)            <---------AHL20(2)   <---------ZAT6 ----->CBF  --------->ANAC58       --------->YAB1    --------->AHL20(1)     <---------ANAC55(1)   ---   atgagatgagacacgagccaaacacacatggtctctattatattcatatataaaatatatcagtttaataaatggtttacgtgagtctagagttagggta  23008800                                   <---------HSFB2a(2)                           --------->At5g28300                                      <---------LBD16 <                          ----------->GT1                               <----------DOF2             - ---ZAT18               <---------ZAT14          --------->AHL20(2)   <---------TOE1(2)   <---------- ------>ICU4            --------->ZAT14      ----------->GT1         ------>ZmHOX2a(1)--------->LBD16   cttatgtctctgtatacatcaacttgtacagtgaattttagaagacatggataaaatactgttttaaaatcctactttcggacaagtccggatgtcatac  23008900           <---------AHL20(2)           --------->AHL20(2)          --------->AHL20(2)          <---------AHL20(2)      <---------AHL20(2)     --------->AHL20(2)     <---------AHL20(2)<----------DOF2 <--------ATHB1<-----------GT1                                                                    <-- --------->YAB1<---------AHL20(2)                                                               ----- ---------ATHB12       ------>ZmHOX2a(1)               --------->DAG2                          <----- -------->ICU4<---------AHL20(2)               ----------->GT1                            --------->DAG2 -HVH21   <---------AHL20(1)          <-----------GT1 ---------->DOF2                    ---------->DOF2   caatgattttaatttttttaatgtcctttttatatgtttttttctaatttagaaaaaaaagctctaaacttctagttttctcaaatgaccataaagtatt  23009000                  --------->AHL20(1)                  --------->AHL20(2)                  <---------AHL20(2)                  <---------AHL20(1)                 --------->AHL20(2)        --------->ARR14(2)        <---------ARR14(2)    <-------TEIL <---------AHL20(2)   ------->GAMYB                                           <------   --------->GLK1(2)        <-------MYC2                                        <---------ANAC58   --------->CCA1(2)        <-------MYC3        <------ZmHOX2a(2)               <---------ANAC58 -------YAB1  --------->ATHB51     --------->MYB52(1)   --------->ICU4  ---------->DOF2       <------ ---->YAB1    <---------ICU4------->MYC2  --------->TOE1(2)          ----------->GT1---------->ID1  < ----YAB1  --------->TOE2(3)------->MYC3--------->ARR14(2)--------->TOE2(3) ---------->DOF2   <------   atgagattcgaatccataattttatttgcatatgctataacggacatgcgatccagtaatccttgatgagctagtaaagaaagcttgttgtttttttctt  23009100                                                                          ---------->DOF2        <---------TOE2(3)    --------->MYB52(1)                         <---------YAB1  --------->ATHB12       --------->AHL20(2)                         --------->TOE2(3) ---ANAC46              <---------AHL20(2)      --------->YAB1   <---------AHL20(2) ---ANAC58              --------->AHL20(2)   --------->YAB1      <-----------GT1     --------->AHL20(2) ---------WOX13(1)--------->CCA1(2)   --------->YAB1          <---------ICU4   ----------->GT1    --- ---ANAC58     ----------->GT1       --------->ICU4    ----------->GT1  <---------TOE2(3)   ------->TEIL   ggattgatttaagaaaatggatacaaataaataactgaaatgatcagtaatagtaaatggtcaatatttacattaagaaagttgaaaatatatgtatatg  23009200  Previous    Next  AGI:  At5g56860.1    Description:  GNC (GATA, NITRATE-INDUCIBLE, CARBON METABOLISM-INVOLVED); transcription factor. Identical to GATA transcription factor 24 [Arabidopsis Thaliana] (GB:Q5HZ36;GB:Q8VZC1;GB:Q9LV39); similar to CGA1 (CYTOKININ-RESPONSIVE GATA FACTOR 1), transcription factor [Arabidopsis thaliana] (TAIR:AT4G26150.1); similar to unknown [Populus trichocarpa] (GB:ABK95624.1); contains InterPro domain Zinc finger, NHR/GATA-type; (InterPro:IPR013088); contains InterPro domain Zinc finger, GATA-type; (InterPro:IPR000679) Range:  from: 23006491    to: 23008693    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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