Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   -------DOF2                                                                       --------->ATHB51 --TGA1a                                                                           <---------ICU4 ->ANAC55(2)  <---------ALFIN1                                                     <--------ATHB1 ->TGA1a      --------->ANAC46                                                     <---------AHL20(2) ->O2   ----------->RAV1(1)                                                        --------->AHL20(2) --O2  --------->MYB46(3)                        <---------DAG2                   <---------YAB1 ->ANAC58     --------->ANAC58               --------->LBD16      <---------YAB1  --------->ICU4   <- ->ANAC58  ------->GAMYB  --------->YAB1 <-----------GT1  --------------->AGL15 --------->YAB1    <-- --ANAC55(2)  --------->ANAC58  <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)          <---------YAB1--------   tttattccaacaacacacacatctcttagcataaaacacatattttccccaatttttctgccatatatatgattttagaccataataatttcatcaaaag  22989300                                                                --------->ANAC58                                                                --------->ANAC58              --------->At4g35610                --------->ANAC58                                  --          <---------ALFIN1                       --------->ANAC58       --------->WOX13(1)         <-          ----------->RAV1(1)             --------->ARR11(3)    --------->ANAC46        --------->AHL20(2)       --------->PCF2        --------->ANAC58    --------->ANAC46      <---------AHL20(2)         ---      <---------WRKY18(1)    --------->ANAC58   <---------HSFB2a(2)    --------->AHL20(2)    -------- --------At5g28300        <---------ZAT18 <---------ARR11(3)  <---------ALFIN1          <---------AHL20(2) ---------GT1 <---------At4g35610    <---------REM1(1)     --------->ANAC46            --------->AHL20(2) -->DOF2 --------->MYB46(3)<---------ALFIN1     --------->HSFB2a(2)   --------->AHL20(2)--------->AHL20(1)   ttacagtttgacccacagctacagttgtcgcactccttgttgtagttcttctcgcaactataccacacacaaattaatcaaacaaacaaaaaaattagta  22989400                                        <---------GLK1(2)                                    --------->At4g35610                                    <---------At4g35610                                   ------->TEIL                                 <-------TEIL                                --------->ANAC58                               ------->MYC2                               ------->MYC3                            <---------ALFIN1                            ------->GAMYB                           --------->MYB46(3)                --------->ICU4 <-------MYC3    <---------YAB1       --------->WOX13(1)                       --------->ANAC46 ------->AHL20(2)       <---------WRKY38(1)                       --------->ANAC58 --------AHL20(2)      --------->WRKY18(1)            <---------ARR14(2) ------>ICU4   <---------TOE2(3)--------->ANAC58      --------->ARR14(2)                        ----- --->GT1      ---------->DOF2  <-------MYC2 <---------YAB1        --------->ANAC58          <--------   attaatatgatgagattaaagattagtcaaccacatgcatctgattctgatcagcatatatgcagaacaggccaaaatgtttttgtgtctactcactaac  22989500                                                          ----------->GT1                                                         <---------TOE2(3)                                                       ---------->DOF2                                                   --------------->AGL15                                                   <---------------AGL15                                                  ----------------->AGL3                                                  ===================================================               --------->YAB1                     <-----------------AGL2         --------->TOE2(3)                        ----------------->AGL1                  --------->At4g35610        --------->ANAC58                          ----------------->AGL2                  <---------ANAC58        --------->ANAC58                        --------->ANAC58                          <---------ANAC46        --------->ANAC46                        --------->ANAC58                          <---------ANAC58      <---------DOF5.7(2)            <---------------AtSPL8                           <-------GAMYB  --------->YAB1        ----------->GT1       ---------->DOF2                 <------ZmHOX2a(2) ---->ZAT6  --------->ANAC58         --------------->AtSPL8  ---------->DOF2 --------->ARR11(3) -MYB52(2)  --------->ANAC58    <---------AHL20(2)<-----------------AG      <------ZmHOX2a(1)   acaattgtaaacgtaagtcataagaagagtttattgaattttgtaccatgaagccattaaaggtaaagacgagagagaggatcaagggggttacctgcaa  22989600                            --------------->AGL15                           ----------------->AGL2                      <---------ALFIN1                                                 <---------WOX13(1)                  --------->ATERF1(1)                                                --------->ATHB12                  <------ZmHOX2a(1)                                                <---------WOX13(1)               <------ZmHOX2a(1)                                                  <------------CBF            <-----------RAV1(2)              ------>ZmHOX2a(1)                <----------DOF2            ======================RAV   --------->YAB1                     *TSS  --------->ATHB12    <---------ALFIN1  ----------->RAV1(1)    --------->LBD16            <---------ANAC58 <-----------GT1--------->ALFIN1  --------->YAB1<--------P     <---------CCA1(2)<---------YAB1 ===========================================MADS_MADS--------->GLK1(2)  <---------ANAC58 <-----------GT1   gagtcaccacatttgcaggaggagccacatccacaattagaatcatcctggttagaatcagtcccatttctcttacttgtctttgattgattaacttctg  22989700                                                                                     <---------DAG2                                                                            <-------TEIL   --------->YAB1                                                                           --------->ARR14(1)                                                                           --------->GLK1(2)                                                           --------->HSFB2a(2)       <----------DOF2                                                           <---------HSFB2a(2)   <------ZmHOX2a(2)                                                     --------------->AGL15--------->ARR11(1)                                                     <---------------AGL15--------->ARR14(2)                      <----------DOF2               =================================================                 --------->YAB1     ------------>CBF----------------->AGL3<---------GLK1(2)--------->ANAC46                <---------YAB1      --------->MYB46(3)   <---------AHL20(2)--------->CCA1(2)        <<<<<<<<<TBF1<---------ANAC58            --------->ZAT18          <---------ARR14(2)     <<<<<<<<<TBF1   <---------ANAC58    --------->YAB1<-----------TBP  ----------->ARR10  --------->ANAC55(2)   tagtttcttcttcttcttatgatgcttttgtgatttcaaccaatgggaatggccactatttatagaagaagagagagattcggatcactttatacataat  22989800                                                                                    <---------TOE1(3)                                                                                    <---------TOE2(3)                  --------->TOE2(3)                                               <---------AHL20(2)        <-----------GT1                      <---------YAB1              ---------->DOF2   --------->AHL20(1)                       <---------TOE2(3)          --------->ANAC58   <---------AHL20(1)                  --------------->AGL15           --------->ANAC58   --------->AHL20(2)                  <----------DOF2       <---------At4g35610 --------->AHL20(2)   <---------AHL20(2)           <--------HAHB4               --------->At4g35610 <---------AHL20(2)  --------->AHL20(2)            <---------ICU4               <---------ZAT2      <---------AHL20(1)  <---------AHL20(2)           <---------ATHB12              --------->ZAT2----------->GT1 ======================================================MADS_MADS<-------TEIL     --------->AHL20(1)   ccaaataaatttacgaataacatcaacttgcccatcattttctttttatgttagatttgttccagcttcattcaagaaagtaatttaatgttagagtttt  22989900                                                      <---------ANAC55(2)                                                   --------->ARR14(2)                                          -------->ATHB1                                          --------->ATHB12                     --------->ANAC58                                          --------->ATHB51                     --------->ANAC55(1)                                          <---------ICU4                       --------->ANAC58                                         <---------AHL20(2)                    --------->ANAC46                                         --------->ICU4                     <---------REM1(2)             ------------------------>ANAC81       <---------ARR14(2)     <---------SPL7        ------->GAMYB                    <---------ATHB51               --------------->AtSPL8     --------->MYB52(1)                  --------->AHL20(2)             --------------->AtSPL3      <     ----------->RAV1(1)           --------->TOE2(3)  ----------->GT1   <---------------AtSPL8   ---- --------->ANAC58                 ----------->GT1  --------->GLK1(2) --------->DAG2             ----- --------->ANAC58                 <----------ID1<---------ANAC46    ---------->DOF2     <---------ARR11(3)   agcaagacaacagagtatcaaacaaactaatagaaaacgtcaaattattggcgaatatgtaaaaaacaaaaaaagtcgtacacgcaagaagataactatc  22990000                      ------->GAMYB                      --------->RAP2.6(2)                      --------->DEAR3(1)                      ----------->HVH21                     --------->ATERF1(1)                     --------->DEAR3(2)                    <------NtERF2                    <---------At4g35610                    <---------ATERF1(1)                           <-----------GT1                    --------->At4g35610                        <---------AHL20(1)               --------->ANAC46                     <---------AHL20(2)         --------->YAB1------>NtERF2     <------ZmHOX2a(1)     <---------ARR11(3)    ------------>CBF--------->ZAT2      --------->ANAC58       --------->ARR11(3) ------------CBF    <---------ZAT2      --------->ANAC58--------->YAB1           --------->ARR11(3) -------->CBF--------->MYB52(1)---------->DOF2     --------->AHL20(2) ------>ZmHOX2a(1) ---->YAB1   <---------DOF5.7(2)      <-----------RAV1(2)      --------->AHL20(1)<---------ARR11(3)   gcaattgccaatagtaaacggcagccgacccaaaaaagaggcaggaaaacttatttaatgagaaatattttcctctgttttgaaatcttcttgtggtcat  22990100                                                                                                    <                                                                                                    <                                                                                       --------->ARR14(2)                                                                                       <---------ARR14(2)                                                                                      --------->GLK1(1)                                                 <---------AHL20(2)                   <---------GLK1(1)                                                --------->AHL20(2)                    --------->CCA1(2)                                               <---------YAB1            --------->AHL20(1)        --                                              --------->AHL20(2)         --------->AHL20(2)        <-             <------ZmHOX2a(1)              <---------YAB1               <---------ARR11(3)        <-            ----------->HVH21               <---------TOE2(3)           <---------CCA1(2)        <---           --------->LBD16                 --------->AHL20(2)       <------ZmHOX2a(2)<---------ARR14(2)          <-----------RAV1(2)              <---------AHL20(2)   <---------TOE1(2)    --------->ARR14(2)      ------>NtERF2  <---------WRKY38(1)   --------->YAB1      <-----------GT1       --------->ARR11(3)     --------->DEAR3(1)               --------->ICU4         <---------ANAC58        <---------ARR11(3)   <---------ATERF1(1)  --------->ANAC46 <---------YAB1      <---------ANAC58<-----------GT1     <---   ttggacgacgacccaggacatggtctacgctcttctactacttattaatattatatatgagtttcttacgatccatatattacatcagatatccgtttta  22990200  Previous    Next  AGI:  At5g56795.1    Description:  MT1B (metallothionein 1B) Range:  from: 22989268    to: 22989675    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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