Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            <---------ALFIN1                                                                                         <---------MYB55(2)                                                                                         --------->MYB46(3)                                                                                        -------->P                        --------->ARR14(2)                                              ------>MYB46(1)                        <---------ARR14(2)                                              ------>MYB83                      <---------MYB46(3)                                              --------->AtMYB61                     <---------TOE1(2)                                         ------>ZmHOX2a(2)        --------->HSFB2a(1)              <---------ZAT14                      --------->CCA1(2)        <---------HSFB2a(1) ------>ZmHOX2a(1)                                 <------ZmHOX2a(2)       <---------ARR11(3) ------>ZmHOX2a(2)                                  <---------AGP1 --------MYB52(1) <---------MYB46(3)     --------->ZAT14                     <---------ARR11(3) ------ANAC58     --------->ATHB12      --------->ALFIN1         --------->At4g35610 --------->MYB46(3) ------ANAC58    <---------ATHB12  ------->TEIL                --------->YAB1--------->AGP1  -------- --DOF2--------->ARR11(3)<------ZmHOX2a(2)               --------->ANAC46    --------->ARR11(3)   cgtttttgaaatcttcccaatcgttggatcctataagtacctgtgcagcatcaaactttacacaatcagataaaactaagatctaaaaccaaccacttca  22983100                                                                              ------->TEIL                              --------->CCA1(2)                             <-------TEIL                             <---------ARR11(3)               --------->GLK1(1)                             --------->ARR11(3)               <---------GLK1(1)        ---------->DOF2 ------->AGL15    --------->MYB59<-------TEIL    --------->AtMYB61 --------->LBD16 <----------ID1   agtagcaaatgaaacagaattaggctaattagatatacatatagttagcgaccaattctaacagaaatccagagaaaatgcatttgggacaaagcagaca  22983200                                  <---------LBD16                              --------->GLK1(1)                                    ----------------->AG                              <---------GLK1(1)                                    ==================                    <----------DOF2             <------ZmHOX2a(2)                  ----------------->AGL1                   ------>ZmHOX2a(2)           <---------ARR11(3)               --------->GLK1(1)                   =======================HOX2a_HOX2a                   --------->ARR11(3)                  <------ZmHOX2a(2)====================HOX2a_HOX2a      --------->GLK1(2)                  ========================HOX2a_HOX2a              ------->GAMYB<---------GLK1(1)                 --------->ARR11(3)--------->HSFB2a(2)           --------->At4g35610                 --------->ARR14(2)------>ZmHOX2a(1)<---------GLK1(2)   <---------ARR11(3)                 <---------ARR14(2)--------->LBD16  --------->ARR11(3)  <---------ARR14(2)                 <---------ARR11(3)<---------HSFB2a(2)  <-----------GT1 --------->ARR14(2)        --------->YAB1  --------->ZAT6         --------->ARR11(3)<---------At4g35610   cactaggcattcaaaatgggatctttacactgaaatcctggaaatggaagatcagatttttcgattcaactgaaaatctgagaattccgaaatgggtttc  22983300                                                                        <---------HSFB2a(2)                                                                    --------->O2                                                                    <---------O2                                                                  --------------->AGL15                                                                  <---------------AGL15                                                                 ----------------->AGL1                      --------->KAN4(2)                         ------>MYB46(1)                     <---------HSFB2a(1)                     --------->At4g35610     <---------ANAC46                     --------->HSFB2a(1)                    <---------ARR14(2)       <---------ANAC58                     --------->HSFC1(2)                 <---------At4g35610          <---------ANAC58                     <---------HSFC1(2)                 --------->At4g35610          <---------bZIP60(2)                    ----------->ARR10            ---------->DOF2------>MYB83        <------NtERF2            <------ZmHOX2a(2)              ---------->DOF2  --------->ARR14(2)    --------->ALFIN1           <---------ARR11(3)           <---------HSFB2a(2)<------ZmHOX2a(1)   <---------DEAR3(1)           --------->ARR11(3)         ------------------------>ANAC81   --------->HSFB2a(2) =================================================================================MADS_MADS       <--   agagaaaacacaagatcgagcgaaaattctcaatctacaaatcgagaaagagaaagacagaggacctgccacttggagaagacggtgtcgtgtttagttc  22983400                                                         --------->GLK1(1)                                                      --------->DEAR3(1)                                                     <------NtERF2                                                    ------>NtERF2                                                  <------NtERF2                                             --------->ANAC58                                   <------NtERF2 ------>NtERF2                                  ------>NtERF2  <-----------HVH21                                 <---------DEAR3(1)--------->DEAR3(1)                                --------->ATERF1(1)<---------DEAR3(1)                               <---------ATERF1(1)--------->ATERF1(1)                           -----                              ----------->HVH21  <---------ATERF1(1)                          <------                              <---------DEAR3(1)<---------DEAR3(1)                           <-------GAMYB                             --------->ATERF1(1)--------->DEAR3(1)                          ---------                             --------->SPL7  --------->ANAC58                           ----------->HVH21            <----------DOF2<---------PCF2 --------->ARR14(2)                    --------->ARR11(3) -------MYB52(1)        --------->ALFIN1  <---------ARR14(2)          ---------->DOF2 <---------ZAT6-   gtttgtagtcttctcttttgaagacagtggggacgacggcgaaggaaacgccgtcgccgaattccatttcgataaaaccgatgatatagtgtgaccgtta  22983500        <---------ARR14(2)      --------->ZAT18                                <---------MYB52(1)      <---------ZAT18                               --------->At5g28300           --------------->AGL15    <---------At4g35610                         <---------ALFIN1                 <-----------------AGL3 ---------->DOF2                                --------->DEAR3(1)               ----------------->AGL2 ---->AHL20(2)                                  --------->AtMYB61              --------->ANAC46 ---MYB52(1)    <----------DOF2  <---------MYB52(1)----------->GT1        <-----------GT1        <--- -->GT1------>NtERF2           ----------->GT1 <---------ABI4(2)        <-----------GT1    ------->TEIL -------->AHL20(2)          <---------ZAT18    --------->MYB46(3)---------->DOF2 ----------------->AGL3   aattaaagcggacttggtcttttttctcagtgctcgttaatttagagacaccaccgttaaaaatgagaaaagtttttctcccctccaaaaatggatgttt  22983600                                                                                    ----------->GT1                                                                                  --------->SPL1(2)                                                                  --------->At5g28300                                                      <---------At5g28300         --------->SPL7    <    --------->HSFB2a(2)                               <---------DOF5.7(2)        <---------SPL1(1) <-   ----------------->AGL1                            <-----------GT1   --------->HSFC1(2)       <---- ------>ZmHOX2a(1)      <---------AHL20(2)--------->DAG2  <---------MYB52(1)    <---------SPL7  <---- --------GT1    <---------YAB1           ---------->DOF2 <-------GAMYB <---------HSFC1(2)      <-----   atccttccaaaatggatgatttttgttttattctgtccgaaggaaaagtttcaagttaccgttggaacggtgaagcttcttctgtacggtttattagtta  22983700                                                                                              <------                                                       --------->MYB52(1)                     <------                                            --------->At5g28300                          <---------MYB59                                           ----------->GT1                       --------->YAB1                                           --------->TOE2(3)               ==========================                                           ------->GAMYB--------->DAG2     --------------->AGL15       <---------AHL20(2)                  ================================================MADS_MADS ---------MYB52(1)                         --------->YAB1                  <---------------AGL15 ------GAMYB                           --------->MYB46(3)        --------->ARR14(2)     --------->ANAC55(2) -----DOF5.7(2)              ------------>CBF       --------->YAB1         <----------DOF2 <--------- -----At5g28300         --------->TOE2(3)  --------------->AGL15 --------->GLK1(2)      <---------ANAC55(2) ------GT1      <---------AHL20(2)--------->YAB1--------->ICU4   <---------ARR14(2)  <---------ARR14(2)   ccgttggattttttttttttaatctacattagtcaatgttgacaaccgtaattagcataagggagggaatctacattctttaatgagaatacttaacttt  22983800                                                   --------->ATHB12                                                 --------------->AGL15      --------->AHL20(1)                                                <-----------------AG        --------->AHL20(2)                                                =======================================MADS_MADS                                                <-----------------AGL2      <---------ARR11(3)                                                <---------ANAC58            --------->ARR11(3)                                                <-----------------AGL1      <---------AHL20(1)     <<<<<<<<<<WRKY26                           --------->ANAC55(2)         <---------AHL20(2)     <<<<<<<<<<WRKY38                      <---------DAG2                ------>MYB46(1)     <<<<<<<<<<WRKY43             <---------YAB1<---------ANAC58         ------>MYB83   ----------->GT1                <---------AHL20(2)                   --------------->AGL15 ---DAG2                       <---------AHL20(2)<---------------AGL15 <---------MYB59 ----DOF2             <----------DOF2      <----------DOF2          <-----------GT1 ================================================================MADS_MADS --------->AHL20(2) --GT1            <---------CCA1(2)   <-----------GT1         ----------->GT1                      <-   tcaattggtcaaattttcttctatctttgggatttttttattacacttttacttgatttggcaaatgttattaccaaatatattgatgagaaccagaaat  22983900                                                --------->ICU4                                                <---------YAB1                                               --------->TOE2(3)                                              <---------ICU4                                              --------->YAB1                                              --------->ATHB12                                              <--------HAHB4               <-----------GT1                                             <---------YAB1             <---------ICU4                                     <----------DOF2               --------->AHL20(2)         <------                         <---------ATHB12    <---------ATHB12  --------->AHL20(1)     ----------->GT1                     --------->MYB46(3)      --------->ICU4    <---------AHL20(1)     <---------ANAC58   --------->ANAC55(2)  ------>MYB46(1)    --------->WOX13(1)  <---------AHL20(2)     <---------ANAC58   <---------ANAC55(2)  ------>MYB83 ------>ZmHOX2a(1)         --------->AHL20(2) --------->CCA1(2) ----------HVH21   <-----------GT1  --------->TOE2(3)         --------->AHL20(2) --------->ARR14(2)<-   tggtcatgtgatattcgttttcaaccaatcttgtctatcctttgttaatcattagtattttagaataaattgaatatttacaaaatatgcgtaaaataac  22984000  Previous    Next  AGI:  At5g56780.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G56770.1); similar to effector of transcription [Brassica napus] (GB:AAT00536.1) Range:  from: 22981491    to: 22983467    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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