Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                --------->YAB1                                   <---------AHL20(2)                       <---------TOE2(3)                                --------->YAB1                           <----------DOF2                  <----------DOF2  --------->AHL20(2)                   <---------ANAC58          <------MYB46(1)    --------->YAB1                             <---------ANAC58 ---------HSFB2a(2)         <---------AHL20(2)                      <---------MYB52(1)  ---------->ID1 -------->HSFB2a(2)        --------->AHL20(2)              <---------AHL20(2) --------->TOE2(3) >YAB1    <------MYB83     <---------AHL20(2)              --------->AHL20(2)----------->GT1       <-   ttttagaaaatttggtttctctttttttttttaataataaaactaaacagtctctaaaaatttatattcggtttgcttaatgttaattttgttgttaacc  22974700                 <---------ANAC58                 <---------ANAC58              <---------MYB52(1)           ------>MYB83           ------>MYB46(1)         --------->AtMYB61                                                  <---------At5g28300         <---------ALFIN1                                                  <-----------GT1         --------->DEAR3(1)                                            --------->AHL20(2)        <---------At4g35610          <---------AHL20(2)                <---------AHL20(2)        --------->At4g35610   --------->YAB1                          --------->AHL20(2)        --------->ZAT2     --------->YAB1                             <---------AHL20(2)       ------->TEIL       <---------ATHB12                            --------->AHL20(1)      <---------ALFIN1    --------->ICU4                              <---------AHL20(1)  --------->LBD16 ----------ARR10 --------->ANAC55(2)--------->AHL20(2)         <-----------GT1        <-----------GT1   aaaacttcgcacctcccttacttatccaattatcaacatttaatatttgtttacatttatacaattatccaatttatttacagcaatttttccgaattag  22974800                                                                         <---------AHL20(2)                                     <---------ICU4                      --------->AHL20(2)                                    --------->ICU4               --------->WOX13(1)                                  --------->AHL20(2)            <---------AHL20(2)                                  --------->YAB1                --------->AHL20(2)                        <---------ZAT2                         --------->AHL20(2)            ----------->GT1   >>>>>>>>>GT-1                --------->AHL20(2)       <---------YAB1   <---------At4g35610              --------->HSFB2a(2)                        -       <---------MYB52(1)  ----------->GT1     --------->YAB1  <---------AHL20(2)            <-------      <-------GAMYB     --------->ZAT2     --------->YAB1<---------HSFB2a(2)              <---------AHL20(2)   tattcgactgttattggtgaaattcgagctggttaataatatttatcaaaaataagtttctataaataaatcaaattaaaaatgtttcttattttaagtt  22974900             <-----------HVH21          <---------ANAC58          <---------ANAC58          --------->ANAC55(2)      <---------MYB52(1)          <------NtERF2      <-----------HVH21          ------>NtERF2                                            ---------->DOF2     <---------SPL7             <---------ANAC46                                         ------------  <---------At5g28300         --------->LBD16             <---------AHL20(2)        ----------->GT1 <---------WRKY18(1)         --------->ATERF1(2)   --------->LBD16           ---------->DOF2 <-----------GT1       --------->ZAT6             --------->ANAC46         --------->ANAC58        -- ---------->HVH21   <-----------GT1              <---------LBD16           --------->ANAC58        <- --TOE2(3)<---------ANAC46 --------->MYB52(1)   <---------At5g28300 ----------->GT1------------------   ttttgaccgttcgcgtgtcatgttacgactaccggcgtctatggagaaatcaccgcaaaatttatagagagagtaaaacgaaagagaagaaaaaaaggaa  22975000                             --------->ARR11(3)                             <---------ARR11(3)           <------NtERF2            --------->ANAC58 ------------>ANAC81   --------->LBD16               --------->DAG2                --------->ANAC58 --------->GT1        <---------HSFB2a(2)          ---------->DOF2          ---------->DOF2    ------ ---------ID1         --------->HSFB2a(2)     ----------->GT1            --------->At4g35610--------- ------>ANAC81  <----------DOF2            <------ZmHOX2a(1)  <----------DOF2    ---------->DOF2   aacgaaaaaaaaacgtttctttttccagagaggtcttaagagagaggagagagaaaaggcatcgctttgtatataagctaaagaaaagccaaaaaacaat  22975100                                                                                <---------RAP2.6(2)                                                                                <---------ANAC46                                                                               --------->RAP2.6(3)                                                                              <---------ATERF1(1)                                                                             ----------->HVH21                                                                             ----------->TGA1                                                                            <-----------HVH21                                                                          <---------DEAR3(1)                                                                         <------NtERF2                                                                         --------->ATERF1(1)                                                                        ------>NtERF2                                                                        <---------ATERF1(1)                                                                       <---------DEAR3(1)                                                                       ----------->HVH21                                                                       --------->DEAR3(1)                                                                      <------NtERF2                                                                      --------->ATERF1(1)                                                  <------NtERF2       --------->RAP2.3(1)      <------MYB46(1)                            --------->LBD16     <---------ATERF1(1)         <---      <------MYB83      ---------->DOF2          ------>NtERF2       ------>NtERF2   ---------->CDC5    --------->ALFIN1>>>>>>>>>TBF1               --------->LBD16      <---------RAP2.3(1)      -------    <--------P   ------------------------>ANAC81<---------LBD16     <---------DEAR3(1) --------->At4g35610   *TSS          >>>>>>>>>TBF1      --------->ARR11(3)            ------->GAMYB--------->ATERF1(1)  < --->GLK1(2)  >>>>>>>>>TBF1         <---------ARR11(3)           --------->MYB46(3) ---------->DOF2 < --->CBF    ------------------------>ANAC81    <---------LBD16 --------->MYB52(1)------>NtERF2<------   ctagaggttgggagaagaagaagaagaaaagagaagaagctcttgttatcccggcgttcttaaaacaacgacggcgacggtgacggctaagcggaagagc  22975200                                     --------->DEAR3(1)                                     <---------DEAR3(1)                                     <---------ETT(2)                                     --------->ETT(2)                              --------->ATERF1(1)                             ------>NtERF2                             <---------ATERF1(1)                            --------->RAP2.3(2)                            --------->RAP2.3(3)                           --------->ATERF1(1)                           --------->ORA47(2)                           --------->DEAR4(2)                           <------NtERF2                           --------->RAP2.3(1)                          <---------ATERF1(1)                          <---------RAP2.3(1)                          ------>NtERF2                         --------->DEAR3(1)                        --------->ATERF1(1)                        --------->RAP2.3(1)                       <---------RRTF1(1)                       <---------RAP2.3(1)          --------->MYB52(1)--------->DEAR3(1)         <---------ATHB12<---------DEAR3(1)         ----------->HVH21--------->ABI4(2)     ----------------->AGL1--------->RRTF1(1)                                                      -- -------DOF2          <---------RAP2.3(2)                      <------NtERF2                     ---- -->ARR11(3)          --------->ANAC46          --------->KAN4(1)                               <---- ---------MYB46(3)    <---------RAP2.3(3)       <---------KAN4(1)                  --------->TOE2(3) -----------RAV1(1)  <---------At5g28300       <---------KAN4(2)                <-----------GT1------ ---ARR11(3)         --------->SPL7--------->LBD16--------->GLK1(2)          <----------DOF2   <-----   ttttgttgccaatgacggactcttacggcgccgtctccgtcgacgttggaacaatctatcttggtggcaaggtttcattctttaacctttgaactcggat  22975300                                                                                     --------->ALFIN1                                                                                    ------->MYC3                                                                    <---------LBD16 <-------MYC3        <----------DOF2                                        --------->ATHB12    <---------O2   ---------->DOF2                        <---------ANAC46   <---------MYB52(1)    --------->O2 ------->LBD16                            <---------ANAC58  =================================MYC_MYB -->ZmHOX2a(2)                  --------->TOE2(3)           <-------GAMYB          --------->TGA1a --ZmHOX2a(2)                   --------->TOE1(3)      ======================================bZIP_DOF --->ARR14(2)                   --------->YAB1         <----------DOF2             ================== ----ARR14(2)         <---------LBD16     <---------ANAC58 <-----------RAV1(1)     <---------TGA1a  <   ccgaataaagctttgatttttgtttctgggtttatcttaaacttgcttaaatctaatctttctgttgatttggggaagaacagacatgtgggcattgtta  22975400                                                                                                   <-                                                                           <---------GLK1(1)     ----                                                                          --------->ARR14(2)    <----                                                                          <---------ARR14(2)  -------                                                                   <---------ANAC58           <------           ----------->GT1                                         <---------ANAC58       <---------AHL20(2) --------->ATHB12             <----------DOF2                      <---------ANAC46       --------->AHL20(2) =============================bZIP_DOF                         <----------DOF2          <----------DOF2 -------TEIL       ---------->DOF2                          --------->GLK1(2)----------->GT1 <-------   gattcatttgtttttgtaaaaaaaagactcatcttttgtttgaatcaaatgttcttggagaaattctttgcttgtggatttgtgaaacttcttttattat  22975500                                                                        <---------YAB1                                                                      <---------ICU4                                                                      --------->YAB1                                ------>ZmHOX2a(2)                    --------->ICU4                               <---------HSFB2a(1)                   <---------YAB1                               <------ZmHOX2a(2)         <---------ARR11(3)                               --------->HSFB2a(1)       --------->ARR11(3)                              --------->ARR11(3)        --------->CCA1(1)                              <---------ARR11(3)        <---------GLK1(1)   <-------TEIL       <---------YAB1                    --------->GLK1(1) --------YAB1        --------->KAN4(2)                  <---------RVE1(1) ----->YAB1         --------->KAN4(1)                   --------->RVE1(1) -----YAB1          <---------KAN4(1)                   <---------CCA1(1)                       ----- -->YAB1           <---------KAN4(2) <<<<<<<<<TBF1     --------->ARR11(3)             ------>ZmHOX2a(1) ---ICU4  <---------HSFB2a(2) <---------ARR14(2)       <---------ARR11(3) <---------AHL20(2)<-------- --YAB1   --------->HSFB2a(2) --------->ARR14(2)   ---------->DOF2<---------YAB1     --------->TOE2(3)   tatgattcatttccagatgggattattcttgggatcttcttcttctctctattcaaagatatcttcttcttattattattttgtattccttattctttgt  22975600  Previous    Next  AGI:  At5g56750.1    Description:  Ndr family protein. similar to Ndr family protein [Arabidopsis thaliana] (TAIR:AT2G19620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65385.1); contains InterPro domain Pollen specific protein SF21 (InterPro:IPR015511); contains InterPro domain Ndr (InterPro:IPR004142) Range:  from: 22975103    to: 22978142    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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