Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <----------DOF2                    <------                                                          <---------ANAC58                    <------    --------->AHL20(2)                   <----------DOF2  <---------ANAC58          --------->ANAC58 -------->AHL20(2)              --------->ATHB12  <---------AHL20(2)                --------->ANAC58 ---------AHL20(2)          <---------AHL20(2)    --------->AHL20(2)               --------->SPL7 -------->ICU4             <---------AHL20(2)   --------->CCA1(2)              <---------------AtSPL8 ----->GT1                 --------->AHL20(2)  <---------ARR11(3)              <---------------AtSPL3 -->DOF2     <---------TOE2(3) <---------ATHB12--------->ARR11(3)----------->GT1 <---------SPL7 <----   aaaaaattatacattaagaaaaacaagaattaaatcatttgggctgtaagatttaaatgggcttgaattgataaatataagatggtacggcccattgctt  22924100                --------->ZAT2                                                                   <---                ----------->RAV1(2)               <----------DOF2                                <---                <---------ZAT2                   <-----------------AGL3                          ----   ----------->GT1  <------NtERF2      <---------WOX13(1)                                        ---- ---ANAC58      --------->At4g35610 --------->ICU4<---------------AGL15                         ----- ---ANAC58 ----------->HVH21 ---------->DOF2 <-----------GT1                        ----------->GT1 -----CCA1(2)   <---------At4g35610 <---------YAB1--------------->AGL15   <---------ANAC46      -----   atctctggtatatttgacagctggcgctaagaaaagtcttaattgattttctctttttttggtatcggaaaacgttttgtgtaaattggataaacgaatt  22924200    <---------DAG2                             <---------ALFIN1    <----------DOF2                  --------->AHL20(1) <-----------GT1                     <---------AHL20(1)                    ------->TEIL ------AHL20(2)                  <---------AHL20(2)                  <---------AHL20(2)            <- ------AHL20(1)                  --------->AHL20(2)           --------->ANAC58                     -- ----->AHL20(2)        <---------MYB46(3)    <---------ALFIN1 --------->ANAC58           <---------AHL20(1) ----->AHL20(1)        <---------DEAR3(2) <-----------GT1     --------->ANAC46           <---------AHL20(2) ---->YAB1  <-----------GT1     --------->AHL20(2)<----------DOF2   --------->AHL20(2)   --------->AHL20(1) ---->AHL20(2)       ---------->ID1<---------TOE2(3)--------->AHL20(2) <---------TOE2(3) --------->AHL20(2)   atattacttttttttttcgatttgtcggtttgaaattaatatttttcccacactttaaatgtataagcaaattaatgtatttgatatcgaatttattaag  22924300                                                <---------AHL20(1)                                                --------->AHL20(1)                                          <---------AHL20(2)                                          --------->AHL20(2)                                     --------->AHL20(2)                          --------->MYB52(1)         --------->ZAT18             <---------AHL20(2)  <--------P  <---------ARR14(2)       <---------At4g35610       ----------->GT1<---------AHL20(2)   --------->ARR14(2)    ---------->DOF2          <---------PCF2    --------->YAB1    --------->HSFB2a(2)              --- --------ANAC46              <---------PCF5    <---------AHL20(2)<---------HSFB2a(2)<---------LBD16 --------->GT1               --------->TCP20   --------->AHL20(2)--------->HSFC1(1)<---------ANAC46--   agcgtataaagctcacaaattcaattcaatgggaccagtttaatttaaattatattggggtagttttcgagaataggcataaataacgggggagtaatga  22924400                        --------->At4g35610                             ------>NtERF2                        <---------LBD16                           ----------->RAV1(2)                        <---------At4g35610              <------------CBF             <---------ETT(1)                       --------->MYB52(1)              <---------AHL20(2)       --------->MYB52(2)           <-----------HVH21 <---------ARR14(2)        --------->AHL20(1)     <---------MYB52(1)          ----------->GT1    --------->ARR14(2)        --------->AHL20(2)    <---------MYB52(1) ------->DOF2         ---------->CDC5                  <---------AHL20(1) <---------LBD16 ------->DAG2   ---------->DOF2           --------->WOX13(1)<---------ZAT14<------NtERF2     <-------   aaaagttggaaatggtcacaaagcttagcggaatccagacaagtctatcaaatcgaatttattgtactgcctgaggcccggtttgtttccgaccagtgtt  22924500                                                                                              <------                                                                                            <--------                                                                                            ---------                 ------------>CBF                                                          ------->TEIL         --------->ANAC58                                                              <---------TOE2(3)         ----------->GT1                                      --------->ZAT14         <---------DOF5.7(2)    ----------->HVH21      --------->ANAC58                   <---------ZAT14       --------->DOF5.7(2) --ZAT6  --------->ANAC58  --------->ANAC58  *TSS   <---------ALFIN1               <----------DOF2   caacttctgacaagaaaaaaacaatagccaagaaaaaaaaactaaattagtttcccactctcgctgtagagagagagagagagagctttaacgaagcttt  22924600                                                                                  <---------ARR11(3)                                                                            <---------HSFB2a(2)                                                                            --------->HSFB2a(2)                                                                         >>>>>>>>>AtERF-3                                                                         >>>>>>>>>AtERF-4                                                                       --------->At4g35610                             <---------DAG2                            --------->ZAT2 ----DOF2         --------->DAG2        ---------->DOF2                <---------At4g35610         <- -HSFC1(2)       ---------->DOF2   --------->ZAT6               >>>>>>>>>TBF1     --------->ARR11(3) >HSFC1(2) ----------->GT1   <----------DOF2                 >>>>>>>>>TBF1------>NtERF2---------->DOF2   tgttttttgtagagagagaaaaagcttcaaacttttttcactaaaagagagaattaactcgaagaagaagaagagctgccagaagataataaagcttcct  22924700                   --------->ANAC58             --------->ANAC58             --------->ANAC58  ----------->GT1                                                  <----         <---------TOE2(3)   <---------ZAT14                                                <--------       ---------->DOF2---------->DOF2          <---------ANAC46                           <---------At4g35610  <---------ANAC46 --------->ANAC58            <---------ANAC58 <-----------ARR10      <---------At4g35610 ---------DOF2   ---------->DOF2               <---------ANAC58<---------CCA1(2)    <---------At4g35610   tctttcgagtaaaggaagcaaaagcaaagtgtgtagttactcagcaatggcgagagacttcaagcttatcttctccatttcaattctgcttctgcttcta  22924800                                                                              --------->KAN4(1)                                                                 --------->At4g35610   ---------->ID1                                               ----------->GT1 -----TOE1(2)                     <---------At4g35610           ----------->RAV1(1) --DOF2                           --------->At4g35610      ---------->DOF2   <---------KAN4(2)   ggtttgtctctctctgtctctactactcacttcaagagctgtctgagactttgttctgaaatagagcagcaaaattaagaacattcaatggtttccaatt  22924900                                                   --------->YAB1          --------->DAG2                                         <---------ZAT14         <-----------TGA1                                      <---------At5g28300       <---------ANAC58                 <---                     <---------MYB52(1)  --------->ZAT14        <---------ANAC58     <---------GLK1(2)                --------->ANAC46     <-----------GT1 ---------->DOF2      ---------->DOF2    <-------   tcaattcttgttgaatagactccattaccttcttctaatttactgtagagctatcaaaagaaaatttcgtcagaaaaaaagtcaattgattctgtctttt  22925000  Previous    Next  AGI:  At5g56590.1    Description:  glycosyl hydrolase family 17 protein. Identical to Putative glucan endo-1,3-beta-glucosidase 13 precursor [Arabidopsis Thaliana] (GB:Q9FJU9); similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT4G29360.1); similar to beta-1,3-glucanase [Medicago sativa] (GB:ABD91576.1); similar to beta-1,3-glucanase [Medicago sativa] (GB:ABD91577.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490); contains InterPro domain X8 (InterPro:IPR012946); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 22924545    to: 22926785    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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