Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     --------->ANAC58                   --------->ANAC58                   --------->ANAC46                                        <---------ATHB12     ------>ZmHOX2a(2)                                             --------->AHL20(2)    <------ZmHOX2a(2)                                          --------->AHL20(2)   --------->YAB1<--   --------->ARR14(2)                                         --------->AHL20(2) --------->WOX13(1)   <---------ARR14(2)   --------->ICU4                    --------->AHL20(2)  ------->TEIL       ---- ->GT1             ----------->GT1                    --------->YAB1     --------->WOX13(1)    ------   tttcagatcggaccctagtccaagtaaaaatggaaatgtagttgaattagtctctataaaaaaaataaaaaaaatcaatgaatcaattagaaaattgaaa  22919600                                         <-----------HVH21                                        --------->bZIP60(1)                                        --------->TGA1a                                        <---------ANAC55(2)                                        <---------O2                                        --------->O2                                        --------->ANAC46                                        --------->ANAC58                                        --------->ANAC58                                         <---                                        <---------TGA1a                                        <-----                                        <---------bZIP60(1)                                    <-----                                        =====================================bZIP_DOF         <------    <----------ID1                    <---------ALFIN1                                      ---------    ----------->GT1           <----------DOF2                                              --------->AHL20(2)  ---------->DOF2   ---------->DOF2  ------>ZmHOX2a(1)                                  --------->YAB1  ================================================bZIP_DOF                             <---------ATHB12 --------ID1        ==============================bZIP_DOF                             <---------ATHB51 ------->GT1    --------->YAB1====================bZIP_DOF        <----------DOF2  ------------>CBF ---->DOF2   ----------->GT1  <---------DAG2            <---------TOE2(3)--------->ATHB12  --------->YAB1   aggaaaaagaaaaactagtaataaaagtaagactttttcctcacgtcaaacaaaaattaagaaatatacttttgttgatttgtttttcaataataatatt  22919700                                                                                            <--------                                                                                          <---------MYB52(1)                                                                                        <---------ANAC46                                                                                        <---------ANAC58                                                                                        <---------ANAC58                                                                                   -------->HAHB4                                                                                   <--------ATHB1              --------->YAB1                                                       <---------ICU4     <---------At4g35610                                                          --------->ICU4 ------AHL20(2)                                                 <-----------GT1   <---------ATHB51 ----YAB1     -------->HAHB4                         --------->AHL20(2)         --------->YAB1 ----AHL20(2) <---------ICU4                        --------->AHL20(2)         <---------YAB1 ---AHL20(1) <---------YAB1    <---------YAB1   --------->AHL20(2)            <---------AHL20(2) >AHL20(1) --------->YAB1 -------->ATHB1--------->YAB1     --------->AHL20(2) --------->AHL20(2)   attttgcatcagataataatagcatgaattattctcatcgaatcacaaaaaaaaataaaaaaaaaataacaagactaaattttaataattccgtcttttc  22919800                               <---------AHL20(2)                               --------->AHL20(2)                               --------->AHL20(1)                   --------->KAN4(2)                  <----------TaMYB80                  --------->HSFB2a(1)                  --------->KAN4(1)                  <---------HSFB2a(1)                  <---------KAN4(1)                 --------->ARR14(2)              --------->LBD16 --------->AHL20(2)             <---------HSFB2a(2)                            ------>MYB46(1)                   <------      --------->YAB1          <---------AHL20(2)            ------>MYB83                      -------      <---------ICU4     ------------>CBF                 <---------MYB59                     <------     --------->ICU4--------->ARR14(2)              --------->At5g28300                   <---------TOE2(3)     <---------YAB1<---------ARR14(2)              --------->LBD16                       <---------TOE1(3)   --------->YAB1<---------KAN4(2)              <---------At5g28300                 --------->MYB52(2)  <---------YAB1<---------GLK1(2)       <---------AHL20(2)--------->TOE2(3) <----------DOF2<------ZmHOX2a(1) --DOF2      --------->HSFB2a(2) <------------CBF ------->GAMYB <-----------GT1   <---------MYB52(1)   tcttgtgataattatccagaatattctcacaattaaattgatttttttgtaaccgtgaaacctaatttacctaaggctctttttgttagttaaggatata  22919900                                                                                          --------->O2                                --------->ARR11(3)                                        --------->TGA1a                    --------->KAN4(1)                                                     <---------TGA1a                    <---------KAN4(1)                                                     --------->bZIP60(2)                   <---------KAN4(2)------>ZmHOX2a(1)                                     <---------O2             <-------GAMYB      <---------ARR11(3)                                        --------->ANAC46            --------->MYB111(1) --------->ARR14(2)                                        --------->ANAC58           <--------P--------->KAN4(2)                                                    --------->ANAC58     <---------ARR14(2)  <---------At5g28300                                    <----------DOF2     --------->ARR14(2) <-----------GT1                             ================================bZIP_DOF ---ARR11(3)<---------MYB46(3)  <---------ARR14(2)                  <----------DOF2  <---------ZAT18 -->ARR11(3)--------->MYB111(2)<---------CCA1(2)        <---------ARR14(2)      ====================bZIP_DOF ---AHL20(1)--------->MYB55(2) <---------GLK1(1)        --------->ARR14(2)<<<<<<<<<TBF1 <---------ALFIN1   tttctcatatatggttgttagaatattcactgtatatcctctgtataagttacgaccatatatgagaaaacttttcttcttcctttgcacacacgtccca  22920000                                    <---------HSFB2a(2)                                    --------->HSFB2a(2)               <---------ZAT14                                  ------>NtERF2                     <---------At4g35610                                 >>>>>>>>>AtERF-4                   <---------ZAT2                                 >>>>>>>>>AtERF-3                   --------->At4g35610                               <---------ZAT2                       --------->ZAT2                               --------->ZAT2                    ------->GAMYB                               --------->At4g35610             ------>MYB83  --------->CCA1(2)                       --------->ATHB12                       --------->MYB52(1)                       --------->YAB1                         ----------->RAV1(1)              <-----------GT1  <---------At4g35610           --------->AtMYB61      --------->At4g35610     ----------->GT1 --------->GLK1(2)           --------->DAG2------>MYB46(1)      <---------At4g35610   aaacagagagcaaaattcaccagaatcatggagagctgccagaagaaacaaaaattggagacaccaacagagctcagtgatatgcctgatgacttaatct  22920100                                                                   <---------HSFC1(2)                  <---------ANAC58           ------->MYC3          --------->HSFB2a(1)                  <---------ANAC58           <-------MYC3 <---------ARR14(2)              <---------ANAC58              <---------ANAC55(2)    <---------HSFB2a(1)              <---------ANAC58   <---------ARR14(2)       --------->ARR14(2)    <---------GLK1(2)            --------->ARR14(2)      <---------GLK1(2)          --------->ARR14(2)  --------->AHL20(1)            <------ZmHOX2a(1)     --------->YAB1    <----------DOF2  <---------AHL20(1)      ---------->DOF2   --------->ANAC55(1)    --------->HSFC1(2)  <---------ARR11(3)<---------MYB52(1)    <---------ALFIN1--------->GLK1(2)         <---------ARR14(2)   tcaaaatattctcgttccttccgttttttaaagaggatttagcaacacgtttcatatcagaatatgggaagggtctttggaatccagacccgaatgccat  22920200                                                                                       <---------At4g35610                                                                                 <---------ANAC58                                                                                 <---------ANAC46                                                <----------DOF2                  <---------ANAC58                                               ------>ZmHOX2a(2)            --------->STY1(2)                                             ------->TEIL                 <---------HSFB2a(2)                                             <---------AGP1               --------->HSFB2a(2)                                             --------->ARR11(3)        --------->GLK1(2)         ------->TEIL               <---------ANAC46                  --------->ARR14(2)      <---------YAB1   <---------ANAC58      <---------ARR11(3)       <---------GLK1(2)--------->At4g35610   <---------YAB1      <---------ANAC46      <---------ARR14(2)       <---------ARR14(2)   --------->ICU4      <---------ANAC58      --------->ARR14(2)     ----------->ARR10 ------->TEIL <-   atttgatgatgaatcactcgatatgacttgtatgagttttgtatatggatctttgatgtccaaggatgctcagattctagatagcttgcatctcaagctt  22920300                                                                        --------->ARR14(2)                            <-----------GT1                             <---------ARR14(2)                    --------->GLK1(1)        <-------GAMYB       --------->ZAT2  --------------------                   --------->ARR11(3)       ----------->GT1      <---------At4g35610             <---------ANAC58 <---------ANAC58                   --------->At4g35610             <---------ANAC58 <---------ANAC58                   <---------ZAT2  <----------DOF2 -----ZmHOX2a(1)   <---------ARR11(3)   --------------------->WRI1      --------->GLK1(2)           <   aggaaatactatattgcttcagatatcaattttcttgttcaacttggggttaatcgatctatgagagagctgagaatcgacttctttggaaaaaccctag  22920400                                                                                   <---------ANAC46                                                                                   <---------ANAC58                 <---------ARR14(2)                                                <---------ANAC58              <---------ANAC58                                                <---------MYB46(3)              <---------ANAC58                                                --------->MYB52(2)          <---------ANAC58                                                    <------MYB83          <---------ANAC46                                                  <--------P     --------->ALFIN1                                                    --------->LBD16     <-----------RAV1(1)               --------------->AtSPL3           --------->LBD16   <---------ANAC58             ---------->DOF2            <---------ARR11(3) <------MYB46(1)   <---------ANAC46         ------->GAMYB                  --------->ARR11(3)<---------AtMYB61   <---------ANAC58         --------->TOE2(3)         <---------AHL20(2)<---------ANAC46 <---------At5g28300     <---------ALFIN1             --------->AHL20(2)<---------LBD16 ->WRI1   <---------ANAC58  --------->TOE1(3)    <------ZmHOX2a(2)     <---------LBD16 -----------GT1  --------->ARR14(2)    --------------->AtSPL8       <-----------HVH21<---------MYB52(1)   aattaccgtgttgcttgagtacctgcacaaccctaaaagttttggtactcgatcatttaaatatcatgtctgtcccgggttggtttcgtttgccatcagt  22920500  Previous    Next  AGI:  At5g56570.1    Description:  Identical to F-box/FBD/LRR-repeat protein At5g56570 [Arabidopsis Thaliana] (GB:Q9FJV1;GB:Q45GE5); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G56560.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74740.1); contains InterPro domain FBD (InterPro:IPR013596); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 22919962    to: 22921822    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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