Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                             <-------                               -------->HAHB4                                             <---------YAB1                               --------->ATHB12                                         <--------HAHB4                               <--------ATHB1                                           --------->YAB1                              <---------YAB1                                           <---------YAB1                              <---------ATHB12                                       <---------ZAT6                          ------>ZmHOX2a(1)                                        <---------TOE1(2)                         --------->TOE1(3)         <---------DAG2             <---------ARR11(3)  <-- ------AHL20(2)          --------->TOE2(3)------->TEIL                       --------->RVE1(1)    --- ----->AHL20(2)    <-----------GT1       <---------CCA1(2)   ------->TEIL--------->AHL20(2)--------->YAB1 >TEIL      <---------TOE1(3) --------->ICU4  -------->P <---------TOE2(3)   --------->CCA1(1)    <--   tttttagttaagttaagctattttcttccttaatgattcaaatgtatctaccaatttttgatgtattttgttcaaaaaaatatcgtagtattattatgaa  22906100                                           --------->ANAC46                                           --------->ANAC58                                           --------->ANAC58                                        <---------ATHB12                                      --------->WOX13(1)                                    <---------YAB1                                  --------->ATHB51                                  <---------ICU4                                                 ----                                  <--------HAHB4                      --------->DAG2       <---------AHL20(2)     <---------At4g35610         <---------YAB1                 <---------HSFB2a(2)    <--------HAHB4     --------->At4g35610         --------->ICU4                 --------->HSFB2a(2)    --------->YAB1 ------>ICU4                   <---------ICU4             <---------DAG2               <---------ICU4 --YAB1                        --------->YAB1             <----------DOF2             <---------YAB1 -------ATHB51                <---------ATHB12            --------------->AGL15       --------->ICU4 ------>AHL20(2)              --------->ICU4              <---------------AGL15   <---------KAN4(2) -------AHL20(2)          --------->AHL20(2)        ----------->HVH21---------->DOF2--------->YAB1   ataattcatctgaatacccattatctaaaaaaatcattattaatcaagccaaggctgacactttttttagaaaaaggggtttcgaataatcattttatgt  22906200                                       --------->AHL20(2)                  --------->TOE2(3)    <---------AHL20(2)        --------->AHL20(2)           <----------DOF2                                 ---------->DOF2        <---------AHL20(2)          ------>ZmHOX2a(2)                              <---------AHL20(2)       <---------AHL20(2)         --------->ARR11(3)                               --------->AHL20(2)    <---------AHL20(2)            <---------ARR11(3)             ----------->GT1<---------ICU4    --------->AHL20(1)      --------->DAG2                      --------->DAG2 <---------YAB1    --------->AHL20(2)  --------->AHL20(2)        <---------AHL20(2)           --------->ICU4   --------->AHL20(2)  --------->AHL20(2)         --------->AHL20(2)        <---------ZAT6 ------->GT1<-----------GT1---------->DOF2     <----------DOF2---------->DOF2--------->YAB1        --   agcaaaaaaattattttcaacataaataaaaaagttgatctttaattgtcttttaattacctagaaaaggtttatttagtgataattaaaagtagagaga  22906300                                                       ---------->DOF2                                                   <---------ICU4                                             <----------DOF2                                          --------->ARR11(3)                 <-----------HVH21                                     --------->ALFIN1<---------YAB1 ------>MYB46(1)             <----             ---------->DOF2      --------->DAG2   --------->YAB1   ------>MYB83          --------->ATHB12            --------->AHL20(2)   ---------->DOF2--------->YAB1     <---------ALFIN1<---------ZAT14 ------->GLK1(2)         ----------->GT1  <---------ARR11(3)    --------->PCF2     --------->ZAT14  -   gaatatttgacaaataaaagagagagagagtgacaaaaagtggagacctttcatcatcaaaggagagacccacttcaaatgtcactgcagaatcactggt  22906400           <-------GAMYB          <------MYB46(1)          <------MYB83         <---------MYB46(3)        <---------ANAC46      --------->MYB55(2)      <---------MYB46(3)     <---------DEAR3(1)                             >>>>>>>>>TBF1     <---------AtMYB61                           >>>>>>>>>TBF1                                     --     --------->ALFIN1                         >>>>>>>>>TBF1             --------->ALFIN1           --   <---------MYB46(3)                <---------------AGL15         ---------->DOF2              -----  <-----------RAV1(1)                --------------->AGL15        <---------YAB1                -----  <---------AtMYB61               <---------------AGL15         --------->YAB1             --------->ZAT14 -----ZAT6----------->GT1         --------------->AGL15        <---------YAB1  <---------DAG2   ----- -------->MYB52(2)              <---------At4g35610 *TSS   <---------WOX13(1)  <----------DOF2-------   gttagtggtggtgggttacatagtaagagctctctgctactagtagaagaagaagaagaagattgattataaaggtgttagctttttcaatacttcacac  22906500        <----------DOF2      --------->ANAC58  ---------->DOF2            --------->ANAC58 ---->MYB83           <---------ANAC55(2) ---->MYB46(1)        --------->ANAC55(2) ---->ANAC58          --------->ANAC58 ---->ANAC46          --------->ANAC58                                                      <-------- ---->ANAC58          ----------->GT1                <----------DOF2                       <---------ANAC58 -->ANAC46     <---------MYB52(1)        ---------->DOF2                                   <---------ANAC58   caaataaagcctttctcgttagataagtaacaagcatttactcaaaagcttcttcctttctcactctctctctctctctgtctcttcttgtttgctttag  22906600                 <----------DOF2               ------>NtERF2              <---------ANAC46             --------->RAP2.3(1)             --------->ATERF1(1)             <------NtERF2             ------>NtERF2            <---------ORA47(2)            <---------ATERF1(1)            <---------RAP2.6(1)            <---------RRTF1(1)            <---------RAP2.3(1)            ------>NtERF2            --------->LBD16           <---------RAP2.3(2)           <---------RRTF1(3)           <---------RRTF1(2)           <---------RAP2.3(3)           <---------DEAR3(1)          <---------At4g35610          --------->ATERF1(1)          <---------ABI4(1)          <---------LBD16                                   <-----------------AGL3          <------NtERF2                                   <---------ARR14(2)          --------->At4g35610                             --------->ARR14(2)         <---------RAP2.3(1)                   <---------ARR14(2)         <---------ERF1           --------->ARR11(3)    <------MYB83         <---------ATERF1(1)      --------->ARR14(2)    <------MYB46(1)        <---------RAP2.3(3)       <---------ARR11(3)   --------->MYB59        <---------DEAR3(1)        <---------ARR14(2)   <---------AtMYB61 --DOF2 <---------RRTF1(3)  <------ZmHOX2a(1) <---------GLK1(1) <----------DOF2   acttaagatggctgcggcgcattttagtaaggagagggtcttcagagggtttctggtttggttctgcttttggggactgatgtctctaacatgcgctggg  22906700                             <---------ZAT18                    <---------MYB52(1)                  <---------GLK1(2)                         ------>MYB46(1)           ------->TEIL            --------->ANAC58 --------->ZAT18                ------>MYB83    <---------TOE1(3)            --------->ANAC46 --------->ZAT14           <-----------GT1      <---------TOE2(3)            --------->ANAC58 <---------ZAT14  --------->ATHB12 <---------RAP2.6(3)   <---------CCA1(2)   agactcagtgtttcaaggcagaattttgaagtgcacaaacacttgaatcgattgaataaaccagccgttaagagcattcaggtttttgaatcttttttct  22906800                                                               ------>MYB46(1)                                                             --------->TOE2(3)                                                           -------->P                                                           ------>MYB83                                                           ------>MYB46(1)                                                          --------->MYB55(1)                                                         <---------MYB111(2)                                                         <---------MYB46(2)                                                         <---------MYB111(1)                                                         <---------MYB59                                                         --------->MYB46(3)                           <---------ANAC46         <-------GAMYB<---------WOX13(1)      <----------DOF2                        <----------DOF2            <---------MYB46(3)              --------->YAB1   <   --------->TOE2(3)   <---------DAG2       --------->ATHB12 <---------MYB59      <---------YAB1 ----  --------->MYB46(3)<-----------GT1  --------------------->WRI1------>MYB83     <---------ZAT6   <---   cttaacctccattttcgattttttgccttttgtgtatttgtttgtatgtttggctgttaccaacctaattgattcagtcttagtattatagctttctgag  22906900                         <-----------RAV1(1)                        <---------YAB1                    --------->ANAC55(2)              <---------YAB1             <---------MYB52(1)              --------->ICU4            <----------DOF2            <---------At4g35610 <----------DOF2              ----------->GT1 ---------AHL20(2)  <---------ANAC55(2) ------>ZmHOX2a(1)  ---------->DOF2 ----->ARR11(3)--------->ATHB12<---------ANAC58           <------ZmHOX2a(1) ------ARR11(3)<---------ICU4  <---------ANAC58      <---------REM1(1)    ----------->HVH21   attttatgagttggagatgattacttattgttggctttagtcctttagtaagaaaatgtaggaaagttagaaacttgtgacaactatgtgaaaattttga  22907000  Previous    Next  AGI:  At5g56530.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G55360.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G13510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22094.1); similar to Os07g0573400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060067.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72570.1); contains InterPro domain Protein of unknown function DUF239, plant (InterPro:IPR004314) Range:  from: 22906452    to: 22908995    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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