Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               ----------->GT1                                          --------->CCA1(2)                                         <---------ARR11(3)                                         --------->ARR11(3)                      <---------AHL20(1)                                      ==========================================MADS_MADS    --------                                      --------------->AGL15          <------MYB83--------->AHL20(1)                                <---------YAB1                       ----------->GT1         --------                              <---------AHL20(2)              ----------------->AG<---------AHL20(2)      ----------->GT1        <---------AHL20(2)     <-----------GT1<--------P<---------AHL20(2)    ---------->DOF2    <XXXXXXXXXXXXXXXXXXXXMIR832-5P --------->ZAT6 <------MYB46(1)        <--------   ctaaacaaaagaaaaaaaacaatttcgattttttattttagtagatatagtaaataactctattaccaagttggtttattttatatatttgtcaataata  22902000 <---------ANAC46 <---------ANAC58                          <---------bZIP60(1) <---------ANAC58                     --------->YAB1                       <------MYB83           --- ->AHL20(2)         --------->At5g28300  --------->YAB1                    <------MYB46(1) <---------ZAT6 ->YAB1            ----------->GT1    <---------ICU4                 <---------YAB1      <---------At5g28300 -ATHB12   ------->TEIL    ----------->GT1 --------->bZIP60(1)<----------DOF2        <----------DOF2   tttgtgtgttttgaatctatgtggtaaattagtaatttgataatgacaacacaactatatatgtctttgctattatttggttttagacttttactgtaaa  22902100                  <---------AHL20(2)        <---------ICU4                                                           --------->AHL20(2)     <---------ICU4          --------->YAB1                                    --------->TOE1(3)     --------->YAB1   ----------->GT1                                          <----------DOF2  --------->YAB1 --------->AHL20(2)                              ------>ZmHOX2a(2) ------->DOF2    --------->YAB1                    <---------TOE2(3)           --------->TOE2(3)   <-   caaagaataataactacaataaaaatgtttataaaaacaaactacaagagattaagtttaatatagatcggtttgatacaactttaaatttgtaatcgat  22902200                                             <----------DOF2           --------->ATHB12              <---------GLK1(2)  <---------TOE2(3)         <---------YAB1          <---------ATHB12        <---------AHL20(2)       <-----------GT1   --------->WRKY12 ----------GT1  ----------->GT1   --------->AHL20(2)  ----------->GT1        --------->WRKY38(1)   ttatcaacacaaatcatttggaaaaaaaaaccccaattttttggattctttttattcagttaaacgtttttaaaccaagttgactcgtattattcaactg  22902300                         ------>MYB83                         ------>MYB46(1)              <----------DOF2         --------->ARR14(2)                                         --------->TOE2(3)         <---------ARR14(2)        ----------->GT1        <---------DAG2                 ------->GAMYB  <---------AHL20(2)     --------->MYB52(1)           <---------ALFIN1             <-----------GT1 --------->AHL20(2)    <---------MYB59     ----------->GT1<----------DOF2  --------->ANAC58      *TSS <---------AHL20(2) <------ZmHOX2a(1)     ----------->GT1<---------DAG2    --------->ANAC58    <-----   gaattaaatcgtatcggtttaaggaccgaaccgaataatgtgaaatggaaaaaatcccacctttttgttttcttaactcgctagtttacaacacacagag  22902400                                                                       --------->ABI4(2)                                                                       <---------MYB46(3)                                                                      <---------DEAR3(1)                                                                      <---------AtMYB61                                                                      --------->ALFIN1                                                                 <---------ALFIN1                                                                <------NtERF2                                                                <---------REM1(2)                                                               ------>NtERF2                                                              <---------bZIP60(1)                                                              ----------->HVH21                                                              --------->bZIP60(1)                                                             <------NtERF2                                                            --------->REM1(2)                      --                                                          --------->LBD16                          <-                                                         <---------ANAC46                        ----                                                         <---------ANAC58                    --------                                                         <---------ANAC55(1)                 <-------                           --------->YAB1                <---------ANAC55(2)              --------->RAP2.6(3)    ---------->DOF2 ---------->DOF2                      <---------ANAC58             <---------CCA1(2)  <---------ATHB12<---------YAB1          --------->CCA1(2)--------->ALFIN1      <---------At4g35610 -----ID1  <------ZmHOX2a(2)           <---------TOE2(3) --------->ANAC55(2)  --------->LBD16--------   acaaatcaaagagatcgattgtgaaagaatcaaaatttgttgagataagacatggtgttccgtggcgacacggtggtgtccgtagctcatatatcggctg  22902500                                   ------>ZmHOX2a(2)                                  <------ZmHOX2a(2)                                 <---------ARR14(2)                            <-----------HVH21                            ------>NtERF2                            <---------SPL7                           --------->RAP2.3(3)                           <---------ATERF1(2)                           --------->DEAR3(1)                           --------->ATERF1(2)        ----------->GT1                          --------->ATERF1(1) <---------ANAC46        ---------->ID1                          --------->RAP2.3(1)<---------LBD16         <-------GAMYB           <---------ARR14(2)  <---------DEAR3(2)    <---------ARR11(3)                          <---           --------->ARR14(2)<------NtERF2   <---------At4g35610    <---------MYB46(3)          <---- ------->ARR11(3)        --------->LBD16     --------->At4g35610    --------->MYB55(2)         ------ --------ARR11(3)        ------>NtERF2    <---------At4g35610       --------->MYB52(2)  --------->ZAT2 ------->ARR10      --------->ARR14(2)    --------->At4g35610     <---------MYB52(1)    ----------->RAV1(2) --->RAV1(2)        <---------ARR14(2)    <---------ZAT2   --------->REM1(1)         <---------At4g35610 --At4g35610      <---------MYB46(3)      --------->ZAT2 <-----------GT1       --------->At4g35610 ->At4g35610 <---------At5g28300 --------->ARR14(2)  --------->ARR11(3)        <---------At4g35610 <-   agatttttcagcgattacggtggattccgccgtcggatcgaatcagcagcggagagatgttacaactcgtttgttgttttccgcttcagcaactgggtcg  22902600             <---------HSFB2a(2)             --------->HSFB2a(2)            --------->GLK1(2)             --------->HSFC1(1)            <---------ARR11(3)           ----------->TGA1       <---------TOE2(3)             <---------LBD16                  <---------ICU4       <---------TOE1(3)           <---------ALFIN1                   --------->YAB1       <---------YAB1              --------->DEAR3(1)                --------->ICU4        <------ZmHOX2a(2)   <----------DOF2    <---------ARR11(3)   --------->ARR11(3)     --------->ICU4  <---------MYB46(3) ------ARR14(2)       --------->ARR14(2) ----------->ARR10     <------NtERF2     <---------YAB1 -----DEAR3(2)       <---------CCA1(2) --------->LBD16       <---------DEAR3(1)--------->YAB1 ----->ARR10 <---------HSFC1(1)    --------->AtMYB61     <---------AtMYB61    <---------YAB1 ------TEIL <---------LBD16     <---------ALFIN1      <---------YAB1 <---------YAB1<-------GAMYB    -   attcgttttatggttctggaactatatctgtgttccacctccggagattttgtattttgatggtcgtcgtgatgatgacgatgatggttatggatcatct  22902700                              <-----------GT1                           <---------ICU4                           --------->ATHB51                          --------->ICU4                          <---------YAB1                        --------->YAB1                          --------->LBD16                        <---------ICU4                        <---------LBD16                       <---------YAB1                       <---------ARR14(2)                     --------->YAB1                     ---------->DOF2      <-----------RAV1(1)                     <---------ICU4 --------->YAB1 ----------->HVH21    <---------YAB1              <                  --------->YAB1<---------YAB1   <---------ANAC58 --------->ARR14(2)               <-          <---------TOE1(2)<--------HAHB4 --------->ATHB12  --------->ARR14(2)                <------ --------->ID1<-----------GT1--------->ICU4      <---------ANAC58<---------MYB52(1)   ---------->DOF2   tcgtcgtcttcgaatgttactcatcatcataattactatcatcttcatttggagtgaccaaagttccggtttttctgatttgttgttgtaaagtttttat  22902800                                                                               <---------MYB52(1)                                                                              <-------GAMYB                                                                             <-----------RAV1(1)                      --------->ARR11(3)                              --------->YAB1            <---------ZAT14                              <---------ZAT6   --------->GLK1(2)        --            --------->ZAT18                              --------->ALFIN1<---------GLK1(2)     <-----     <---------MYB52(1)<------ZmHOX2a(2)         <---------ANAC46 <---------AHL20(2)           <----- -----------GT1       <---------ARR11(3)         <---------ANAC58--------->AHL20(1)            <----- ----------GT1    ---------->DOF2          <---------AHL20(2)    --------->AHL20(2)        <---------ANAC58 ---AHL20(2)--------->ZAT14    <---------YAB1    <---------ANAC58<---------AHL20(1)        <---------ANAC58   ttttcccgtttttgtgcagagaaagatcatgttttgattttgggtttaattccttgggagtgttgaatataatcagagtctgttgttttaaatccttgct  22902900  Previous    Next  AGI:  At5g56520.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G55365.1) Range:  from: 22902397    to: 22903141    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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