Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         ----------->GT1   <---------YAB1 ---------->HVH21                                                      ------>MYB83 ---------->TGA1                                                 <---------At4g35610 -------ANAC55(2)                                         <---------YAB1                            - -------TGA1a                                         <---------GLK1(2)------>MYB46(1)             -- ------>ANAC55(2)                                     --------->ARR14(2)                          --- ------>O2                                            <---------ARR14(2)     ----------->GT1 <------- -------O2             --------->ZAT18            <---------At4g35610  -------->P    <---------TOE2(3) ------>TGA1a          <-------TEIL      ------->TEIL<------ZmHOX2a(1)------>ZmHOX2a(1)  <---------ETT(2)   acgtgacgattgtgaaacaaggatgtgcattggagggactatgtatttgttcagaggattctcattgtgctcctaccaaaggttatttatgtagaccagg  22890600                                                    ---------->DOF2                                                   --------->YAB1 ---------->GT1                                   <---------ATHB12        <---------MYB52(1) ------->DAG2                                  ------>ZmHOX2a(1)        ----------->GT1 ------->DOF2                           ------>ZmHOX2a(1)        ------>ZmHOX2a(1)               ---- ----RAV1(2)--------->GLK1(2)          --------->TOE2(3)   <---------AtMYB61             --------->TOE2(3)   taaagtttatagagaagctagagtttgtactcgtgtaagttcctaaatcctaatcaaagttttggtcctcagttctgttatatatcaaaaacctcattcc  22890700                                                                              <-----------HVH21                                                                            ------->MYC2                                                                            <-------MYC2                                                                            <-------MYC3                                                                            ------->MYC3                                                                            -------->ABF1                                                                            <-------MYC4                                                                            ------->MYC4                                                                           <--------ABF1                                                                           --------->TGA1a                                                                           --------->ANAC55(2)                                                                           <---------ANAC55(2)                                           --------->ANAC58                --------->O2                                           --------->ANAC58                <---------O2                                     <---------WOX13(1)                    <---------TGA1a          =                                  <---------YAB1                           ==========================                    --------->ZAT14--------->ATHB51                   ----------->HVH21             -                    <---------ZAT14--------->ATHB12                 <---------ANAC58               --                    <---------ZAT18<---------ICU4                   --------->ANAC55(2)         -----      <----------DOF2             --------->ICU4                    <---------ANAC55(2)     --------- -->ZmHOX2a(1) <---------ZAT14  --------->YAB1                      <---------ANAC58   --------->ICU4   tctctctgctttaagagaacagagcagtctctgttcataattgacaagcgaaaacgacgttgtattgaattcgtgacacgtgtcaaacaatgagtagtta  22890800                  --------->REM1(2)                ------->MYC4                <-------MYC4                ------->PIF5                <-------PIF5                <-------MYC2                ------->MYC2                ------->MYC3                ------->PIF4                <-------PIF4                <-------MYC3               --------->TGA1a               --------->O2               <---------O2               <---------TGA1a               =========================MYC_MYB               --------->ANAC58      <------MYB83               <---------ANAC55(2)   <------MYB46(1)             <---------ALFIN1    <------MYB83           --------->ANAC58     --------->MYB46(2)                         <---------At4g35610     <-----------HVH21          --------->MYB111(2)                        <-------GAMYB ========================bZIP_DOF<------MYB46(1)             --------->GLK1(2) ==========bZIP_DOF      <---------ZAT14   <---------TOE1(3)--------->ARR14(2)                      - --------->DOF2--------->ANAC58 --------->MYB111(1)         <---------GLK1(2)        --------->MYB46(3) ------->YAB1<------------OsbHLH66 --------->ALFIN1      --------->HSFB2a(2)       --------->MYB52(1) ---->WOX13(1)<---------TOE1(2) <---------AtMYB61        <---------HSFB2a(2)     --------->MYB46(3) - -->GT1    --------->ANAC58    <--------P  <---------TOE2(3)<---------ARR14(2)   ------>ZmHOX2a(2) --   atcaaagtgtcactcgcacgtgaagagagtagagtaggtgggtttagggtttaagtgttccagattcttccaaattcagttgatccaacggctcagactt  22890900                                                           ------>MYB83                      --------                                                           ------>MYB46(1)                   <-------                                                         ------->GAMYB                    --------->YAB1                        ------>ZmHOX2a(1)                <---------MYB59          <---------AHL20(2)                        --------->HSFB2a(2)              --------->AtMYB61    --------->AHL20(2)                --------->ANAC46                        --------->MYB46(3)    <---------AHL20(1)       --------->TOE2(3)<---------HSFB2a(2)            --------->ANAC58       <---------AHL20(2) -------->TOE1(3)    <------ZmHOX2a(2)                 --------->ANAC58       --------->AHL20(1) -------->TOE2(3)   --------->ARR14(2)       --------->ZAT18                 --------->AHL20(2)    <- --------->RAV1(2)  <---------ARR14(2)    <---------MYB52(1)      <----------DOF2 --------->AHL20(2)   aacctgaaacctttgaagacgcgatcctcgaacttcaccagtccgtttgcactatgcaaccaaacacactttgtatcgaataaattaaacaaaaatcata  22891000  ------------>CBF ->YAB1                                                                          ------>ZmHOX2a(2) --ICU4             <----------DOF2 --------->ANAC58                    <---------CCA1(2) ---------DOF2   *TSS               --------->ANAC58                 --------->MYB46(3)   actttacaatcgcataaatcgactttcatcttcttcacaagaaaacctctctcagtcgctaaaacccttgaaccatctcttgatcgctagcttctaagta  22891100                                                      <---------GLK1(1)                                                      --------->GLK1(1)                                                     --------->ARR14(2)                                                     <---------GLK1(2)                                          <---------ANAC58                                    --------->DAG2   <---------ARR14(2)        <---------ICU4                    <------ZmHOX2a(2)     <---------ANAC58                     --------->ATHB12            --------->ATHB12       ---------->DOF2  <---------At4g35610       <---------YAB1            --------->YAB1    ----------->GT1       --------->At4g35610       --------->ICU4      ---            <--------HAHB4   --------->MYB59   <----------DOF2            <---------------------WRI1            <---------ICU4   <---------TOE2(3)<---------ANAC58    --------->ATHB12          <--------           <---------ATHB12  <---------TOE1(3)<---------ANAC58   <---------YAB1--------->YAB1  <-----   agtgtatagttgaatcatttcgatcaaagtttaggtaaaaagttgtttgctttcagatacccttgttttgatttgtgtcgatgattacaaagttttactt  22891200                                                                                                 ----                                             <---------YAB1                                 <--------            <---------TOE1(3)   --------->ANAC58                                           --------->TOE2(3) ------>ATHB12                  --------->ANAC58                       ----------->GT1     ---------- ---GT1 <----------DOF2  <-------TEIL ---------->DOF2                ----------->GT1     -------->P -----DOF2  <---------TOE2(3)   --------->ANAC46       ------>ZmHOX2a(2)                 ------->TEIL   tgatttgtgtctttagggtttattagattcattcaagctataaagttttgattttgatctgtttttgcagagagtgaaaaaccatggcatcaacctttag  22891300                                                                              <---------HSFB2a(2)                <-------TEIL     ------>ZmHOX2a(1)                            --------->HSFB2a(2)        <---------WRKY12         =====================================HOX2a_HOX2a      <-----------HVH21       ------>ZmHOX2a(1)                            <----------DOF2  --------->bZIP60(2)        <---------ALFIN1                           --------->ARR11(3) ----->ANAC46 <------------------------ANAC81                  ------>ZmHOX2a(2)    <------ZmHOX2a(1) --DOF2 <<<<<<<<<WRKY18    <---------ATERF1(1)                 ============================HOX2a_HOX2a ----------->WRI1    <----------DOF2               <----------DOF2      <---------ARR11(3)   cgcaacgtcgtcaatgggttcatctttggctcctccttcgaatcgattgtcatcttttgtttcgatctcatcaagctcttttggaaggactcagagtatt  22891400                    ------>ZmHOX2a(1)                   --------->TOE2(3) --------->ANAC58        --------->ANAC58             --------->ANAC58           <---------DEAR3(1)        --------->ANAC58       <---------RAP2.6(2)           ----------->HVH21      ---------->DOF2         <---------LBD16            <------ZmHOX2a(1)     <------ZmHOX2a(1)     --------->CCA1(2)          <---------ICU4         <---------HSFC1(2)  --------->At4g35610    --------->AHL20(2)           --------->YAB1         --------->HSFC1(2)   gctcagaggaaagcaaggtttcctaaaatatatgcggctaagcaattgcatttcaataaggacgggactgcgattaagaagcttcaagtgagtctattct  22891500  Previous    Next  AGI:  At5g56490.1    Description:  FAD-binding domain-containing protein. similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G46750.1); similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G32300.1); similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G46760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24313.1); contains InterPro domain FAD-binding, type 2; (InterPro:IPR016166); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain Plant-specific FAD-dependent oxidoreductase (InterPro:IPR010030) Range:  from: 22888689    to: 22890670    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g56500.1    Description:  ATP binding / protein binding / unfolded protein binding. similar to CPN60B (CHAPERONIN 60 BETA), ATP binding / protein binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT1G55490.1); similar to chaperonin, putative [Arabidopsis thaliana] (TAIR:AT3G13470.1); similar to CPN60B (CHAPERONIN 60 BETA), ATP binding / protein binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT1G55490.2); similar to RuBisCO large subunit-binding protein subunit beta, chloroplast precursor (60 kDa chaperonin subunit beta) (CPN-60 beta) (GB:P08927); similar to unnamed protein product [Vitis vinifera] (GB:CAO22112.1); similar to unknown [Pop Range:  from: 22891017    to: 22894622    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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