Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                                 ----                                                           --------------->AGL15                 ----                                                           <----------DOF2                       ----                                                           ==========================================                                                           <---------------AGL15                <----                <---------AHL20(2)                        <-----------------AGL2               ------                <-----------TBP                      <---------MYB52(1)           ----------->GT1<---         <-----------GT1                            --------->TOE2(3)     ------------>CBF     ------      <---------ICU4                               ----------->GT1       ----------->RAV1(1)  <------      --------->YAB1                              <---------TOE1(3)  <---------WRKY45         -------      <------------CBF                            <---------TOE2(3)  <---------WRKY38(1)      ------- ------------>CBF   <-----------GT1              --------->MYB52(1)  <---------WRKY12       --------- -----------GT1 --------->AHL20(2)      --------->ICU4  <---------YAB1  --------->MYB46(3)  --------- ------->GT1  <-----------TBP    <---------YAB1  <---------DOF5.7(2)--------->WRKY18(1)--------->ICU4   agtaacaatattgactatatatatactgtatcagtatgagtgaaaattagataacgttattctttttttggtcaacaacaatataggtgaaaattagata  22888300     <-----------TBP                                     <---------ARR14(2)   <----------DOF2                                     --------->LBD16   ==========================================MADS_MADS<---------ANAC55(1)   --------------->AGL15                              --------------->AGL15   <---------DAG2                                     --------->ANAC55(2) --------MYB52(1)                                     <---------ANAC58 ----->ANAC58                                         <---------ANAC55(2) ----->ANAC55(2)                    ----------->GT1   <---------ANAC58 ----->ANAC58                  <----------DOF2        <---------ANAC46 ==================MADS_MADS <---------------AGL15   <---------LBD16 ---TEIL                     --------------->AGL15 <-----------GT1 --->CCA1(2)                 =========================================MADS_MADS ------ANAC55(2)   --------->ARR11(3)         <---------RVE1(1) --->ARR14(1)      <---------AHL20(1)         <---------CCA1(1) ---ARR14(2)       --------->AHL20(1)        --------->ARR11(3) -->ARR14(2)       <---------ARR11(3)    ---------->DOF2 --------->ARR14(2) -->ARR11(1) <---------AHL20(2)<---------DAG2<---------ARR11(3)                     --------->ZAT6 -->ARR10<-----------TBP    ------>ZmHOX2a(2)--------->AHL20(1)            <---------AHL20(2) >MYB59--------->AHL20(2) --------->ARR11(3) <---------AHL20(1)           --------->AHL20(2)  <------   cgttactttttatatataaaaaatatttgatctctttttggttaaaagatatttttccgtattttgaagacttagattaaatgtttacagtaagtcaaat  22888400                                                                               --------->ZAT14                                                                         --------->YAB1                                                                         <--------ATHB1                                --------->At5g28300                     <---------ATHB51                   --------->ANAC58                                     <---------ATHB12                   --------->ANAC58         <---------bZIP60(1)     <------NtERF2                <------ZmHOX2a(2)           --------->bZIP60(1)    --------->ANAC46       <---------YAB1          ----------->GT1                     ------>NtERF2   --------->ICU4 ---CCA1(2)    --------->ARR11(3)           <---------TGA2(1)  --------->ANAC46<---------ZAT14  -----   ctcatattttttatagagatcaagtcagtaagacagtaactatgtgatgtaatgacattccctacatgcccccaataatactgcaatgttttctatccac  22888500                          <---------AHL20(1)                                     <------MYB46(1)                          --------->AHL20(2)                                 --------->MYB52(2)                          <---------ARR11(3)                               <---------MYB52(1)                          <---------AHL20(2)                              <---------------AGL15                          --------->ARR11(3)                              --------------->AGL15                      <---------AHL20(2)                     --------->AHL20(2)  ----------->GT1        --------->At4g35610                                  <---------AHL20(2)  <------MYB83--------        ------>ZmHOX2a(1) --------->AHL20(1)                --------->AHL20(2)  --------->MYB59        <---------At4g35610                   --------->WRKY18(1)         =========================== ---->ANAC46         --------->AHL20(2)      <-----------HVH21       <<<<<<<<<TBF1       <-----------GT1   ataagttgtcctctgaaatttcatttaatatattgttttttttttggggtcaaacaatttgatttaatttcttcttcgttatttggtaaaattacaggtc  22888600                    --------->ANAC58                    --------->ANAC58                    --------->ANAC46             --------------->AGL15             <---------------AGL15              --------->ARR11(3)          ------>ZmHOX2a(1)                     <---------AHL20(1)      <---------ARR11(3)                     --------->YAB1      <---------ICU4      --------->ARR11(3)          --------->ANAC55(2)           <---------YAB1      <-----------GT1          <------ZmHOX2a(2)--------->AHL20(1) <---------YAB1   ---------->DOF2 <---------ANAC55(2)         --------->YAB1 ->ANAC46 ============================HOX2a_HOX2a <------------CBF   <-------TEIL        *TSS ============================MADS_MADS      <---------YAB1   <---------YAB1            ------->TEIL   gctattaatatccttctaataaaagccatatggatcacatgatgttatgatatattgaaacttatcataaatacatagatgagtgaatgaatgcttcaaa  22888700                  ---------->DOF2             <---------ANAC46             <---------ANAC58             <---------ANAC58           <---------AHL20(2)       -------->ATHB1                                           <-----------GT1                   <--       <---------ICU4                                      <----------DOF2                   <-------       <--------HAHB4                                      <---------DAG2                    --------       --------->AHL20(2)                                 <---------ANAC58            <---------LBD16       <---------AHL20(2)                                 <---------ANAC58          <---------ALFIN1       --------->YAB1                                <----------DOF2            --------->At4g35610 <       --------->ATHB51                             ------>ZmHOX2a(2)        ------>ZmHOX2a(1)   ----      <---------ATHB51             <----------DOF2--------->ARR11(3)         ========================      --------->ICU4----------->GT1========================HOX2a_HOX2a  <---------ANAC58     <-------      <---------ATHB12             ------>ZmHOX2a(1)================================HOX2a_HOX2a------    --------->WOX13(1) <-----------GT1            <---------ARR11(3)    <---------ANAC58--------->LBD16   cattgtcaattattttcttgtaaagttacaaaatgtccttttggctaagtttgatcttttgctttttcacatttgcttcctcatctccaccggatgatcc  22888800                                                         ------>ZmHOX2a(1)                                                       ----------->RAV1(2)                                                    <----------DOF2                                                   <----------DOF2                                                   <---------DAG2                                                 ------>NtERF2                                                <---------DEAR3(1)         <---------ARR14(2)                     --------->DEAR3(1)         --------->ARR14(2)                    --------->ATERF1(1)     --------->At5g28300                       --------->RAP2.3(1)    ----------->GT1                           <---------ATERF1(1)  <---------At4g35610                         <---------RAP2.3(1)                            --------  --------->At4g35610                        --------->ANAC46                                -------- ---------HVH21                         <---------------AtSPL3                              --------- --ARR11(3)                     ----------->HVH21--------->ABI4(2)                       <---------ANAC58 ->ARR11(3)                    --------->At5g28300<------NtERF2                       --------->ALFIN1 ---------WRKY12           <---------AtLEC2  <---------DEAR3(1)                      <--------------- -->ZmHOX2a(1)            --------->ZAT14   --------->SPL7                         --------->DAG2 =HOX2a_HOX2a             <---------ZAT14  --------->SPL1(1)                     ---------->DOF2 --ARR14(2)               --------->ZAT18 <---------SPL7 ----------->HVH21     --------->At4g35610 <- >ZmHOX2a(2)   --------->ARR14(2)      <------------------SPL14          ---------->DOF2 <---------ANAC58   tgtcaactgtgaattcggaaacacaatgtgcacggtgacgaactcgtacggcgcctttcctgaccgctctatatgcaaagcagcaaaggtggagtaccca  22888900                                             --------->LBD16                                             ------>NtERF2--------->LBD16                                             --------->ORA47(1)                                            --------->DEAR3(1)<---------ANAC58                                            <---------ATERF1(2)                                            --------->RAP2.6(2)                     <---------ZAT14        <---------RAP2.6(2)                             <--------           --------->At4g35610             --------->ATERF1(1)<---------ANAC58         --------->HSFB2a(2)      --------->At4g35610         --------->MYB46(3)     <---------ANAC58              <---------HSFB2a(2)      <---------At4g35610        ------>NtERF2<------NtERF2 <---------ARR14(2)     <---------GLK1(2) ->ANAC58  <---------At4g35610--------->At4g35610        <---------ANAC58         --------->ZAT2 ->ANAC58  <---------ZAT2     <------NtERF2--------->DEAR3(2) ----------->GT1     <---------ZAT2 <--- >ZAT18<----------CDC5        <---------At4g35610    ---------->DOF2 --------------->AtSPL8 --------- ------WRI1--------->ZAT2 <---------MYB46(3)--------->ATERF1(2) ----------->HVH21 --------->At4g35610 -----ZmHOX2a(1)     --------->ZAT14   ---------->DOF2  <---------LBD16           <---------At4g35610   aggacggaggctgagctggtctctatagtggctgcagccactagagccggccaaaaaatgcgggtcgtgactaggtactctcacagcttccccaagctgg  22889000                                                                     --------->SPL7                                                                 <---------LBD16                 <---                                                               ======================================                                                               -------->P                        <---                                                               ------>MYB46(1)                   <---                                                             --------->AtMYB61                   <---                                                             <---------MYB46(2)                  ====                                                             <---------MYB111(2)                 ----                                                             <---------ALFIN1                    ----                                                             --------->MYB46(3)                 <----                                                             --------->DEAR3(1)              <-------                                                             <---------MYB111(1)             --------                                                             <---------MYB55(2)       <-------GAMYB                                                            --------->MYB46(3)        ===============                                                         --------->MYB46(3)      ----------->HVH21 --    --------->ICU4           --------->ANAC58         ----------->HVH21        <----------DOF2<------ -ZAT2     ---------->DOF2   --------->ANAC58      --------->ALFIN1--------->LBD16   <---------MYB46(3) ------ANAC46               <---------ICU4        <-------MYC3 ------>MYB83    ====================== >ZAT2  ----------->GT1  --------->YAB1           ------->MYC3--------->MYB55(1) --------->WRKY12<---   tttgtactgatggtaaagacgggactctcataagcaccaagtttctaaaccatgtggtgaccaccaacccggaggccaagactttgacggttgagagcgg  22889100       <---------TOE2(3) ------ANAC58 ======MYC_MYB ------ANAC58 ------TGA1a ------ANAC46                                                                     <------MYB46(1) ================================bZIP_DOF             --------->ANAC46           <---------MYB46(3) ----->TGA1a                                          --------->ANAC58          <--------P ----->O2                                    <----------DOF2                   <-------GAMYB --NtERF2                                   <---------ANAC58                <---------At5g28300 --At4g35610                <---------At4g35610       --------->ANAC58     --------->MYB52(1) ->At4g35610                --------->ZAT2  <---------ANAC58              <---------SPL7    <-------- ======MYC_MYB              --------->At4g35610    <---------SPL7   <---------MYB46(3)    --------->ATHB12 --------->HVH21      ---------->DOF2   ------>ZmHOX2a(2)          <---------ANAC46      --------->ICU4 ---DEAR3(1)--------->At4g35610        <---------At4g35610      <---------AtMYB61--------->MYB55(2) < ======bZIP_DOF   ------>ZmHOX2a(2)   <---------AGP1 --------->SPL7--------->ALFIN1   <------ZmHOX2a(1) ------O2   <---------At4g35610       --------->ARR11(3) ------->TEIL<------NtERF2<------MYB83    <--   cgtgactctaaggcaactgatcgaagaagcagctaagtttgatctggctttgccatacgcaccgtattggtggggacttacggttggaggaatgatgggg  22889200  Previous    Next  AGI:  At5g56490.1    Description:  FAD-binding domain-containing protein. similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G46750.1); similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G32300.1); similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G46760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24313.1); contains InterPro domain FAD-binding, type 2; (InterPro:IPR016166); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain Plant-specific FAD-dependent oxidoreductase (InterPro:IPR010030) Range:  from: 22888689    to: 22890670    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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