Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              <---------ANAC46                                                                           <---------At4g35610                                                                        --------->REM1(2)          ---------->DOF2                                               --------->ZAT14       <----------DOF2         --------->GLK1(1)              ------->GAMYB<---------LBD16 ------ARR11(3)         --------->YAB1                 <---------YAB1   <---------ZAT14 ----->ARR11(3)  <------ZmHOX2a(1)    --------->YAB1 ----------->GT1   --------->ALFIN1   atctaaatgctttaaagaaggagcattgatcacaaatccatgatcagtttttggattgtgataaccccctactgtgtagcggatgtttaagctctgcaac  22871400                                              <---------ZAT18                                              <---------ZAT14                                          <---------DEAR3(1)                                       <---------ALFIN1                                     --------->RAP2.3(3)                                   ------>NtERF2   --------->ANAC58                                   <---------ZAT18 --------->ANAC58                                  --------->DEAR3(1)                         --------->ANAC58                                 --------->ATERF1(1)          --------------->AGL15                                 <------NtERF2--------->ZAT14<-----------------AGL1               ---------->DOF2   <---------At4g35610    <---------ATHB12     --------->ANAC58    --------->ANAC58             --------->At4g35610--------->MYB46(3)----------->GT1       ---------    --------->ANAC58         <-----------HVH21--------->ZAT18<-----------------AG ---------->DOF2 <--   gatggcacacaaattgcgaaagtcttcacattgtcagcgccccatcggtgcacaaccaatgtttcaagaatagggaaacaagacaaaagcctctcaacgg  22871500                            ----------->GT1     --------->LBD16                      <---------HSFC1(1)        ----------->GT1                                     -                      --------->HSFC1(1)     --------->MYB52(1)                                     -           <---------ARR11(3)           --------->MYB52(1)                                         --     <---------ANAC58 <---------HSFB2a(2)  ----------->HVH21                   ----------->GT1    ---     <---------ANAC58 --------->HSFB2a(2)  <---------SPL7                 ------>ZmHOX2a(1) --------- >MYB52(1) --------->ARR11(3)          ----------->HVH21                 --------->TOE2(3) ---------- --------DOF2 <----------DOF2   --------->AHL20(2)                  ------->TEIL      --------->AHL20(2)   ttttatcgcttgagaactttacatctagaagagataaattcttgacggaccggaaacaagttgtcgaatgaacatcctcaatggtcaatttcataaagcg  22871600                                                         <-----------HVH21  <----------ID1                                      <---------At5g28300 -------->ANAC58                                      ------->TEIL -------->ANAC58                          ----------->RAV1(1) ------->DAG2           --------->LBD16 --------->At4g35610     --------->WRKY18(1) ------->DOF2      <----------DOF2   --------->At4g35610 <---------RAP2.6(3)                <-------- >DAG2     ----------->GT1           <---------At4g35610 <-----------TGA1                   --------- >DOF2     --------->ALFIN1       ---------->DOF2 <---------------AtSPL3                 --------->YAB1   taaagccacaagggtgtgaaactttccgaaaaactctaaagctgcagcactatatgtaccgtcatagtcaagcgtcggaatcaatttccaaacagaaccc  22871700                                                                     <---------ATHB12                                                      <-----------ARR10                                                      --------->ARR14(3)                                                      --------->GLK1(2)                                                      --------->ARR11(3)                                <----------DOF2       --------->ARR14(2)  --------->MYB46(2)                       --------->ANAC58               <---------ARR11(3)  --------->MYB59                       --------->ANAC58               <---------ARR14(3)<---------MYB52(1)                       --------->ANAC46     <---------AHL20(2) --------->ANAC58 -ARR14(2)        --------->REM1(2)         --------->AHL20(2) --------->ANAC58       --------->YAB1 >ARR14(2)---------->DOF2  <---------At4g35610  --------->YAB1 --------->ANAC46  <---------ATHB12   catcgtttggacaaaagacttgtagacgcagcaacttttatcggaattaatgacaaaatcttcaccagcaaatcgttaggcaaatcactgatatttctca  22871800                                                               <---------ICU4                                                          --------->TOE1(3)                     -----                                                          --------->TOE2(3)                     -----                      <------------CBF                 --------->ARR14(2)                >>>>>>>>>TBF1                  <---------------AGL15                <---------ARR14(2)            --------->At4g35610                  --------------->AGL15             <------ZmHOX2a(1)           <---------GLK1(1)  --                 <-----------------AGL1         --------->TOE2(2)             --------->YAB1   ------                 <-----------------AGL3         --------->TOE1(2)          <------------CBF   -------   tgttgaaacaacctttggttcttctattggaatttggaagacatagaaaacctaggagaacctcaaaatgacatagacattgatatcagaagaagaaaaa  22871900                                                                                        <----------DOF2                                                                              <---------ANAC58                                                                              <---------ANAC58                                                                             --------------->AtSPL8                                                                             <-------TEIL                                                                             --------------->AtSPL3                                                                          <---------HSFC1(2)      --------->TOE2(3)                                           ---------->DOF2      --------->TOE2(3) <---------MYB52(2)                                             --------->ZAT18      -------->P ---->ANAC58                                          --------->AHL20(2)  <---------HSFB2a(1) ---->ANAC58                                     <---------HSFB2a(2)    ---------->DOF2<---------DAG2 -------->DOF2           <---------ARR14(2)   <-----------------------TaNAC69(2)    <-----------GT1 --->DAG2                --------->ARR14(2) --------->WRKY12--------->DAG2--------->HSFC1(2) --->DOF2   --------->YAB1               <---------YAB1    ---------->DOF2--------->HSFB2a(1)      <-   gcaaagaaccgtaatcatatatatcaggtttcgccttgatattacgatgacctagaaaaaataaagtgcaaagagaaagttcgtactaacctttttgtta  22872000            <---------At5g28300          <---------MYB52(1) --------->At4g35610                                   ----------->GT1     <---------ARR14(2)      ------>ZmHOX2a(1)                                  <------------CBF    -     --------->ARR14(2)--------->ANAC58                                        --------->ATHB12   <--     <---------ARR11(3)<---------HSFB2a(1)               <-----------TBP      <---------YAB1    -----     --------->GLK1(2) --------->ANAC58               ----------->GT1        <----------DOF2   <----- ----------GT1         --------->HSFB2a(1)    --------->TOE2(3)        <-----------GT1     ----------   tatacagtatctgttactgccaagaacgctcctctgaatgggtcgaaaccctagttttgttatatagctagtttcacatctttattggtaaaacagtatt  22872100                                                                                   <---------AHL20(2)                                                                        <----------DOF2                                                                       ------>ZmHOX2a(2)                                                                      <------ZmHOX2a(2)                                                                      <---------RVE1(1)                                                                     <---------AGP1--------->YAB1                                                                     --------->AGP1--------->AHL20(2)                                                              <---------AHL20(2)  <---------YAB1                                                             <---------YAB1     --------->YAB1                             ----------->GT1             --------->AHL20(1)    --------->AHL20(2)   <                         <---------ARR11(3)              <---------AHL20(1)    <---------YAB1      <- -------->YAB1           --------->ARR11(3)        --------->ANAC58  --------->ARR11(3)        <----- -------TOE2(3)       <--------P       <----------ID1    <---------ARR11(3)--------->AHL20(2) ------- ---->ICU4          ----------->GT1  <---------------AtSPL8 <---------AHL20(2) <---------AHL20(2)  -- ----YAB1         ------>ZmHOX2a(2) --------->DAG2 --------->ANAC46  <---------ARR11(3)     <-------- ->GT1        ----------->HVH21    ---------->DOF2 --------->ANAC58 <---------CCA1(2)       ---------   aatgaaaactctatgtgtgatcgggtaaatcttgtaaaaaagggacaaaactcaagcaatatttttatttagatcttttatataattatatatagatttt  22872200                                                                                             <-------                                                                                       <---------AHL20(2)                                                                                      --------->AHL20(2)                                                                                      <--------------                                                                                    --------->YAB1                                                                                   <---------YAB1                          ------->TEIL                                            <---------AHL20(2) ---------AHL20(2) <----------DOF2                                 <---------ICU4 --------->AHL20(2) --------AHL20(1)  <---------DAG2                                  --------->YAB1 --------->AHL20(1) ----AHL20(2)--------------->AtSPL8                               <---------YAB1 --------->YAB1 -->AHL20(2) <---------TOE2(3)                                    --------->ICU4<---------YAB1 ------->AHL20(1)------->TEIL                   --------->ICU4  --------->YAB1--------------->AGL15-- -ARR11(3)<---------AHL20(2)              --------->YAB1     ----------->GT1 <---------YAB1  -------- >ARR11(3)--------->AHL20(2)        <---------TOE2(3) <---------TOE2(3)    <-----------GT1  ---------   atatatttgcattttaatgtactttatgcacatttgttaagaaataagaactaattaagctagaagtaataataagtttaccattataataaatagggaa  22872300  Previous    Next  AGI:  At5g56430.1    Description:  F-box family protein. Identical to Putative FBD-associated F-box protein At5g56430 [Arabidopsis Thaliana] (GB:Q9FM88); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G56440.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63564.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain FBD (InterPro:IPR013596); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 22870549    to: 22871801    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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