Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              --------->WRKY38(1)          <-------GAMYB         ------>ZmHOX2a(2)           <---------AHL20(2)       --------->ARR11(3)            --------->AHL20(2)     --------->AHL20(1)       <---------ARR11(3)           --------->AHL20(1)      <---------AHL20(1)              <--------    <---------WOX13(1)              --------->AHL20(2)      --------->AHL20(2)              <--------  <--------ATHB1                    <---------AHL20(2)      <---------AHL20(2)              <--------  --------->ATHB12                  <---------AHL20(1) --------->AHL20(2)                  ----------  --------->YAB1                <---------AHL20(2)     <---------AHL20(2)             <xxxxxxxxxxxxxx <---------YAB1             <---------ANAC46  ---------->DOF2                    --------->AHL20(2) <---------ATHB12          <------NtERF2  --------->DAG2 --------->YAB1     --------->At4g35610 -->ZmHOX2a(1)        --------->ALFIN1   ---------->DOF2<---------YAB1      <---------At4g35610 ---->TOE2(3)       <---------O2--------->AHL20(2)    --------->YAB1<---------AHL20(2)<-------TEIL   tcaatgatagatcgttgatcagaagtggcagcgtttaatttaataaagcaaaggaattttaataaaatgttttattgcagcaaaaaaatacatgtcgttt  22850800                                  <---------RVE1(1)                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                  <---------CCA1(1)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)              --------->ANAC46  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                --------->ANAC58  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)             --------->ZAT14  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)            <---------ZAT14  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <---------ZAT18  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  --------->ZAT6 -ANAC58                   <-----------GT1   --------->ZAT14 -ANAC46                 <---------AHL20(2)  <---------ZAT14       --------->ZAT6 -ANAC58         <---------ANAC46<---------ARR11(3)  --------->ANAC58   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) >ID1----------->GT1 --------->AHL20(2)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)           <-------TEIL xxxxxxxxsmallRNA(l2)<---------AHL20(2)<-----------GT1      <---------TOE2(3)     <---------ZAT6   --   ttcttcaatgtaaaatgcagcgtttaatttaactggatatttaacagtacagtagacggaatgaggttttcactaacaattttagagttcatgtgttttt  22850900               <---------ANAC46            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                 <--      --------->ARR11(3)                                                                        <----      <---------AHL20(1)                                                                        <----      --------->AHL20(1)                               <---------YAB1                           -----     --------->AHL20(2)                         ----------->GT1                  <---------ARR11(3) -  <---------AHL20(2)                          <---------ANAC46              ------------>CBF    ----- --------->AHL20(2)        ------------>CBF  <---------ANAC46          --------->AHL20(2)     ------- XXXXXXXXXXXXXXXXXXXX>MIR397B          <---------AHL20(2)         --------->TOE1(3)       ----------- ------->TOE2(3)          <-----------GT1  --------->ALFIN1       --------->TOE2(3)<---------------AGL15   tcattaaatatatcgttgagggtttttttcacaattcatatttagttggggggttttattactaaaaaccctaaaaaatacaataacttaagaggtaaga  22851000                                     <---------ARR14(2)                                    <----------TaMYB80                                    <---------GLK1(1)                                    --------->GLK1(1)    --------->AHL20(2)              --------->CCA1(2) --------->YAB1                    --------->ARR11(3)        <----------DOF2 ----------CBF                     <---------ARR14(2)        <---------DAG2 -----AHL20(1)                  <---------TOE2(3)   <---------ANAC55(2) -----ARR11(3)                  <---------TOE1(3)   --------->ANAC55(2)                            <- ---->ARR11(3)           --------->ARR11(3)         --------->ANAC58      --------->GLK1(2)        -- ---------->GT1       <---------GLK1(2)           <-----------GT1     --------->TOE2(3)   <---------- ---->AHL20(1)     --------->YAB1  --------->ARR14(2)       <---------ANAC58            --------->ICU4 ---->ARR10    ---------->TaMYB80 <------ZmHOX2a(1) --------->ANAC58 ------>ZmHOX2a(2)  <---------YAB1 >GT1<---------AHL20(2)--------->GLK1(2)     ---------->DOF2<---------ANAC58         ------------>CBF   tattgataaaatttgggaatatcagaatatgttgaaggatatactgagaaagttacgaaatggctttttgatccataatctaacttagtcaatattgaat  22851100                   --------->ARR11(3)                   <---------ARR11(3)              --------->ANAC58              --------->ANAC58              --------->ANAC46 --------ARR11(3)  --------->GLK1(2) ------->ARR11(3)  <-----------ARR10 --CBF    <---------ALFIN1      ------------>CBF      -------->ATHB1               ------------>CBF   agattttagttcccacacgaaaatctcgctaaaacccaatgctatatttgtttgaattattcaaatttagacgactaaacacagttccaatggctaatgc  22851200                                                                  <---------TOE1(2)                                                             --------->ARR11(3)                                                        ------>ZmHOX2a(1)          ------->MYC3     <                               ----------->RAV1(2)     --------->TOE1(3)           <-------MYC2    <-          <---------ZAT18      <---------At4g35610     --------->TOE2(3)           <-------MYC3    --      --------->ATHB12        ------->TEIL        <<<<<<<<<TBF1   <---------TOE2(2)------->MYC2<-----   <----------DOF2 <---------CCA1(2)         <----------DOF2 <---------ARR11(3) <---------AtLEC2 ----   cacttctttcattgccctcgcttatcttcttgcatctggttcgaactctttcttcttccttaaaatcttatgttttctctgtgcatgtgtctgagcgatt  22851300                                           --------->ATHB12                      <-------TEIL                                           <---------ICU4                      --------->ARR14(2)    <---------AHL20(2)                    --------->ICU4                <---------ANAC58   <---------AHL20(2)           <---------AHL20(2)                --------->AHL20(1)   --------->AHL20(2)       <---------CCA1(1)                     <---------AHL20(1) ---------ICU4  <---------WOX13(1)        <---------YAB1          <---------AHL20(2)              <-- --------YAB1 <---------ICU4<---------RVE1(1)                     --------->AHL20(2)             ---- ------->ICU4 --------->ATHB12  --------->AHL20(2)          <-----------GT1    <---------ARR14(2)---- ----WOX13(1)<---------YAB1<---------ARR11(3)     --------->MYB52(2)    <---------ANAC58      <------ ----->YAB1  --------->ICU4--------->ARR11(3)<---------WOX13(1)  --------->AHL20(2)       <---------ZAT6   gataattaaatgtccatgattgttttatagatatttatatgtccatgattgtttgtttcagtttacattatattgtttgcatatacattttagtgtttac  22851400                                           --------->AHL20(2)   <---------ALFIN1                        <---------AHL20(2) --------DOF2                       <---------AHL20(2)            <----------DOF2 ----->TOE2(3)                  <---------AHL20(2)             <-----------GT1            <xxxxxxxxxx ----->TOE1(3)                 <---------AHL20(2)         <---------AHL20(2)             <---------AHL20(2) -----GT1                 <---------AHL20(2)         <---------ATHB12            ------->TEIL   ctttaccacttccaaatgaaaactgaatttttttttattttttttttaatttcaaatgatttttttttcttttgctattgttgaatctcatataatcgca  22851500                                                                                      <-----------HVH21                                                                                     ================                                                                                     ================                                                                                     <---------O2                                                                                     <---------ANAC46                                                                                     --------->O2                                                                                     ================                                                                                     <---------TGA2(1)                                                                                     --------->TGA1a                                                                                     --------->bZIP60(1)                                                                                     --------->TGA2(1)                                                                          --------->TOE2(3)                                                                          --------->TOE1(3)    <-----                                                                       <---------CCA1(2)       <-----                                                              --------->ANAC46       <---------bZIP60(1)                                               --------->YAB1 --------->ANAC58       <---------TGA1a                                              <---------AHL20(2)  <----------DOF2  --------->MYB52(1)                         <---------TOE2(3)<---------ATHB12    --------->ANAC58     <---------TGA2(2)           ----------->GT1     <---------TOE2(3) <---------YAB1------>NtERF2      ----------->TGA1 xxxxxxxxxxxxxsmallRNA(se3) --------->CCA1(2) --------->AHL20(2)  =============================bZIP_DOF   aacacatatatcgtagttaaaacaattgagatttaggcttctctatcatttattattcaactagacgcctttcaaatcttaaaactgacgtcaaacactt  22851600                                                       <---------ANAC58                                                       <---------ANAC46                                                       <---------ANAC58                                                   --------->ABI4(2)                                                   <---------MYB46(3)           --------------->AGL15                  <---------DEAR3(1)           <----------DOF2                        --------->ALFIN1            --------->ANAC58       ---------->ID1       <----------ARF1   <---------ZAT14                 --------->ANAC46 =========================bZIP_DOF        <---------ICU4      --------->ARR14(2) =====================bZIP_DOF         <---------DOF5.7(2)    --------->GLK1(2) =====bZIP_DOF <----------DOF2       --------->DOF5.7(2)      <---------ARR14(2)                    < -----DOF2 <---------------AGL15    --------->TOE2(3) <---------MYB46(3)      --------->ANAC58    <-- ----DAG2 <-----------------AGL1   ----------->GT1<---------AtMYB61      --------->ZAT18 --------->ZAT18   ttttgttttgtttctttctttggcaaatgggagagaagcgttaatgactacggtggtgcttgggaatcggcaatgtgtacaagccatggattgcacaaac  22851700  Previous    Next  AGI:  At5g56368.1    Description:  Encodes a defensin-like (DEFL) family protein. Range:  from: 22851190    to: 22851871    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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