Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           --------->GLK1(1)                                                        <---------ARR14(2)                                                 <---------MYB52(2)                                                 <---------MYB46(2)                                                 <---------MYB111(1)           --------->YAB1                        --------->MYB46(3)--------->ANAC58            <-----          <---------YAB1          --------->ATHB51      --------->ARR14(2)        --------->DAG2 <---        <---------CCA1(2)         --------->ATHB12 --------->MYB52(1)            ---------->DOF2 ----   <-----------GT1   <---------ANAC46       ----------->GT1        --------->ANAC46      --------->ANAC46 ->ZmHOX2a(1) --------->AHL20(2) <---------YAB1------->TEIL        --------->ANAC58      --------->ANAC55(2)   gatatttatcgtatcataaaatagtgtgtaaacacattattgaagaatgtaactaacggatatatatacactcaatctgaaaataaagttcacgcgtctt  22834400                                                                              <---------YAB1                                                                        <---------ARR11(3)     <----------DOF2                        --------->AHL20(2)--------->ARR14(2)     --------->TOE2(3)                <---------AHL20(2)      <---------ARR11(3) -----DOF2                            <-----------GT1         <---------ARR14(2) ------AHL20(2)                    <---------ICU4           ----------->ARR10--------->TOE2(3)  <---- ----->AHL20(2)         --------->TOE2(3)   <---------AHL20(2)--------->ARR11(3)  --------->AtLEC2   taattttctttaatctaagaagtcaacatcaaacgaatatttacatataatttacatagaagaagatactacttgatattctcaatgcaactagaatata  22834500                         ------>MYB83                         ------>MYB46(1)               --------->YAB1                                                                --------              <---------AHL20(2)                                            --------->At4g35610 -----              <---------YAB1                                                <---------At4g35610 <----             --------->AHL20(2)       --------->YAB1              <---------ANAC46        -----------             --------->AHL20(1)      <---------YAB1           <-----------RAV1(2)   <--------P ------ ---TEIL     <---------AHL20(1)   --------->ICU4            --------->AtMYB61    <---------ZAT6------   catacaactagtcaatataataaaaccaaacaagtagttatgaaaactcgattaaacgaagaccacaggcgttgaatcagctactggtagattagtaata  22834600                                                                           <---------AHL20(2)                                                                          --------->AHL20(2)                                                                          <---------AHL20(2)                                                                       --------->YAB1                                                                       <---------ICU4                                                                       <--------HAHB4                                                                       --------->ATHB51    --------->TOE1(3)                                                  <--------ATHB1    --------->TOE2(3)                                                  -------->HAHB4 ->YAB1                                                               <---------YAB1      <---------AHL20(1) ---->AHL20(2)                          --------->YAB1                <---------ATHB51    --------->AHL20(1) -----AHL20(2)                 ---------->DOF2    --------->DAG2      --------->ICU4      --------->AHL20(2) >GT1                         --------->AHL20(2) ---------->DOF2      --------->AHL20(2)  <---------AHL20(2) --->AHL20(2)         --------->ANAC58  <--------HAHB4              --------->YAB1 ----------->GT1 --->ICU4             --------->ANAC58 <---------YAB1             <---------WOX13(1)   --------->YAB1   aataaacctcaaaattagtgaaggaagcaaaataaaagactataattaacaaaaagtcttaaaacttgattaataattaaatgaaagattaataaaatgc  22834700                                                                      <---------MYB46(3)                                                                     <--------P                                                                    <-------GAMYB                                                                   <------MYB46(1)                                                                   <------MYB83                                                                  <------MYB46(1)                                                                  <---------MYB46(3)                                                                  <------MYB83                                                               <-------GAMYB                                              ----------->GT1 <---------MYB46(3)                                              <---------MYB46(3)<--------P                                            <---------ANAC46 --------->ALFIN1                                         --------->ALFIN1   ------->PIF5                --------->DAG2  <---------MYB52(2)         <---------bZIP60(2)               ---------->DOF2 --------->ANAC58            <---------ANAC58          <------ZmHOX2a(1)    --------->ANAC58 <--------P <---------ANAC46                         <         <----------ID1        --------->ANAC46<-------GAMYB<-------PIF5                <-----------GT1      ---------->DOF2    <------ZmHOX2a(1) <---------ANAC46<---------ANAC58           *TSS        <--   <---------TOE2(3)    ----------->GT1 --------->ALFIN1 <------ZmHOX2a(1)   <----------DOF2   <-----   taattaagaaaaggacataaagtaagaggaaacaaggaacgagttggggggttagaagaggacgtggttgggttgttttcttttgttttgtttccttcca  22834800        <<<<<<<<<TBF1     <<<<<<<<<TBF1            <<<<<<<<<TBF1   <------------------------ANAC81 ----------DOF2          <----------DOF2                           ---------->DOF2 -------DAG2         <----------DOF2                    --------->ATHB12            <---------LBD16<- ----ALFIN1        ------>ZmHOX2a(1)                   <---------ATHB12        <----------DOF2     --   ctctttcttcttcttcatttcctctttctttcttcttccttctccattttttctctaatcgttggacaaaaaagattgagcctttttctgggttttattt  22834900                                          <---------ARR11(3)                                          --------->GLK1(2)                                          --------->ARR11(3)                 --------->ANAC58        --------->RVE1(1)                                      <----            ---------->DOF2 <---------ARR11(3)         ==============================================    <---------TOE2(3)       <---------GLK1(2)  <---------TOE1(2)                                -----  ---------->DOF2--------->ANAC58      --------->AHL20(2)    --------->DAG2        <---------YAB1<--- --------HSFB2a(2)     <------ZmHOX2a(1) --------->CCA1(1)  ---------->DOF2   <---------TOE2(3) <---- ------->HSFB2a(2)    <XXXXXXXXXXXXXXXXXXXXMIR426      --------------->AGL15---------->DOF2 <--------   tctataaaggaatcgaaagaagcaaggacagattttaaaaaaaaaatcttgggttttcaagaaaaagtagagacattttaaaggtatgatttttatgttt  22835000 <---------ANAC46 -----MYB46(3)                                                     <---------YAB1 =================================================================MADS_MADS ---->MYB52(2)                                     <---------AHL20(2)    ------------------------>ANAC81 ----GAMYB                 <----------DOF2       <----------DOF2<---------AHL20(2)     --------->DAG2 -------RAV1(1) <---------LBD16                 ===================================================== -YAB1 ----------->GT1   <---------YAB1         <-----------------AGL3 ---------->DOF2---------->DOF2   gttgtgggcatgtaaatttctgggtttatctttgtctcatgtattgtgtttctttatttgagaaaatttatgacaaaggaagaaaacaaaaagctagaaa  22835100                                               --------->GLK1(2)                                              --------->ARR14(2)                                              --------->ARR11(3)                                              <---------ARR11(3)            <---------TOE2(3)        <----------DOF2                          <---------LBD16            <---------TOE1(3)       ------>ZmHOX2a(2)                     <----------DOF2      <----------DOF2    <-----------GT1      <---------ARR14(2)       ---------->ID1      <---------------AGL15       <---------ARR11(3)                  <-----------GT1      --------------->AGL15   <----------DOF2 <---------GLK1(2)     <-----------GT1        <--------- =====================MADS_MADS   --------->ARR11(3)         <---------At4g35610     <---------AHL20(2)   tttgattcctttttaagggttttgttttctctctttgatcttttacaagattctgggttcttcagatgtttttctccttttctgggtttaattctttttg  22835200                                    ------>ZmHOX2a(1)                       <---------ICU4                                            <---------ARR11(3)                     <---------ARR11(3)                                   ----------->GT1                     --------->GLK1(2)                               <---------AHL20(2)                     --------->ARR11(3)  <----------DOF2 <---------ANAC58 <------MYB46(1)              ----------->GT1<----------DOF2        --------->ARR11(3)  <---------WOX13(1)         <-             <---------TOE2(3)   <-----------GT1    <---------ARR11(3)--------->ATHB12 <---------AHL20(2)   <-----------GT1  --------->RVE1(1)    <---------DAG2  <---------ANAC58 <------MYB83 --------->AHL20(2) -DOF2     <---------AHL20(2)<---------DAG2     ---------->DOF2      <---------YAB1   --------->AHL20(2)   ggttttatccaaatttatgtaaaaatcttgactttttcctctcctttttcaaaagatgttcttgtctgaatttgattggtcaaaatcatttaatttggat  22835300  Previous    Next  AGI:  At5g56340.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT4G26400.2); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT4G26400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22124.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 22834786    to: 22836883    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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