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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
<------
ZmHOX2a(2)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
YAB1
--------->
YAB1
<-----------
GT1
<---------
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(1)
<---------
YAB1
--------->
AHL20(2)
--------->
DAG2
----
RAV1(1)
<---------
AHL20(2)
---------->
DOF2
gtatatgagacatttacacatatcgttggaaaaactgcaattaattttaatttcgatcaaactcccagttaaaaaaaaaaaaagtattattttcaatgta
22825500
===================
RAV
<---------
At4g35610
--------->
At4g35610
--------->
WRKY18(1)
<---------
WRKY12
<------
MYB83
----------->
RAV1(2)
<---------
AtMYB61
--------->
YAB1
<-----------
HVH21
--------->
HSFB2a(2)
----------->
GT1
<----------
DOF2
--------->
ANAC46
<---------
WRKY45
<---------
ANAC58
<---------
ANAC55(2)
-
<---------
ANAC58
--------->
ANAC58
<---------
WRKY38(1)
<----
<---------
ANAC46
--------->
ANAC58
<---------
WRKY12
<---------
<-----------
RAV1(1)
<---------
LBD16
<-----------
HVH21
----------->
GT1
--------->
WOX13(1)
--------->
ICU4
<------
MYB46(1)
----------->
RAV1(1)
---------->
DOF2
<
aaactatcaatctatgtggcttttggaattataaacacgggaggtcaaatggtcaactgagccccataatatgaggtctaagtttcaaaagtaaaaccct
22825600
<---------
ANAC58
<---------
ANAC55(2)
--------->
ANAC55(2)
------>
MYB46(1)
<---------
ANAC58
------>
MYB83
<---------
ANAC55(1)
<---------
ANAC58
<---------
ANAC46
<---------
ANAC58
<-----------------------
TaNAC69(2)
<---------
MYB59
-------->
AHL20(2)
<---------
ANAC58
---------->
DOF2
------
DOF2
<---------
AHL20(2)
<---------
ANAC58
<---------
TOE2(3)
--
GT1
--------->
AHL20(2)
<---------
ANAC46
---------->
DOF2
----------
---------
AHL20(2)
--------->
REM1(2)
<---------
At4g35610
<---------
YAB1
<-----------
GT1
ttttaaatagcataaaattgcgtgaagaagttggcactctcgatgctgcttgctcgttaccaaattggagtttattaaagtaaagttttacaaattgtac
22825700
-
---------->
DOF2
<---------
ZAT18
<-----
<-------
TEIL
--------->
AHL20(2)
---------
<------
ZmHOX2a(2)
--------->
ZAT14
---------
--------->
ARR11(3)
<---------
ZAT14
------------>
CBF
<--------
<---------
ARR11(3)
<---------
YAB1
<---------
ICU4
<---------
AHL20(2)
==============
HOX2a_HOX2a
<---------
ICU4
--------->
AHL20(2)
--------->
AHL20(2)
------>
ZmHOX2a(1)
<---------
AHL20(2)
--------->
YAB1
--------->
AHL20(2)
----->
AtSPL8
--------->
AGP1
--------->
AHL20(2)
<---------
At4g35610
--------->
AtLEC2
--------->
YAB1
tactatctcctaatagatccataaaacaatttaaaaattactagtgtagtttagctaataaaaatcacttgcaatgcaagtgtttgattaaaaataattt
22825800
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(1)
<---------
AHL20(2)
--------->
YAB1
---
<---------
YAB1
--------->
HSFB2a(1)
---
-------->
YAB1
--------->
HSFC1(2)
<---------
ICU4
<--
----
AHL20(2)
<---------
HSFC1(2)
--------->
YAB1
----------->
RAV1(1)
<-----
>
AHL20(2)
<---------
HSFB2a(1)
*
TSS
<--------
>
AHL20(1)
<----------
DOF2
<---------
AHL20(2)
<---------
CCA1(2)
<-----------
ARR10
-
AHL20(2)
<-----------
GT1
----------->
TBP
------>
ZmHOX2a(1)
<---------
CCA1(2)
aagtataattttttttcttttgcagaaatttcttctatatataatcatcccatctcctcataactc
acaacaacattgaaacccatttcttcgcctttaa
22825900
------>
ZmHOX2a(1)
<---------
ANAC58
<---------
ANAC58
<----------
DOF2
<---------
ANAC58
<---------
PCF2
------>
TOE2(3)
<---------
MYB46(3)
--------->
ANAC46
------>
TOE1(3)
--------->
ALFIN1
--------->
ANAC58
-------
MYB59
<-----------
RAV1(1)
--------->
ANAC58
<---------
ATHB12
------
GT1
<---------
ANAC46
<----------
DOF2
<---------
At4g35610
------>
ZmHOX2a(1)
--
DOF2
<---------
ANAC58
<-----------
GT1
--------->
At4g35610
--------->
TOE2(3)
ccttacttgaatttttgtgtgggtcctttttttttctttctccaagccatt
gtaagctccaatcttccacattctatctcttcttcctcattttcttcca
22826000
<---------
AHL20(2)
--------------->
AGL15
<---------
ANAC58
----------------->
AGL3
<---------
ANAC58
<-
<---------
YAB1
--------->
DAG2
<--
<---------
AHL20(2)
---------->
DOF2
--------->
DAG2
-----
--------->
AHL20(1)
<---------
YAB1
---------->
DOF2
------
<---------
AHL20(1)
--------->
ANAC55(2)
<------
ZmHOX2a(1)
<-----
<-------
TEIL
<-----------
GT1
--------->
YAB1
<---------
ANAC46
<------
NtERF2
----------->
GT1
tacatacacacatatatatttctgttaccatttaagtgatcataaagttttcttgtgtag
gaataaaaaggcagagaaa
atggagttttttggtaaaatg
22826100
<---------
WRKY38(1)
<---------
WRKY12
<------
MYB83
<---------
ANAC46
<------
MYB46(1)
<---------
MYB46(3)
--------->
ZAT6
--------->
WRKY18(1)
<-------
GAMYB
<------
MYB46(1)
--------->
ATHB12
----------->
GT1
<------
MYB83
<---------
AHL20(2)
--------->
YAB1
<------
MYB46(1)
--------->
MYB59
<---------
YAB1
<---------
YAB1
<------
MYB83
<--------
P
--------->
ANAC58
--------
ICU4
--------->
YAB1
<---------
MYB46(3)
<-----------
HVH21
<
-------
YAB1
--------->
ICU4
--------->
ALFIN1
--------->
ATHB12
--------->
ANAC46
<-------
---->
YAB1
<---------
YAB1
<---------
ANAC58
--------->
MYB55(2)
--------
----->
GT1
--------->
YAB1
<---------
ANAC46
<---------
MYB46(3)
----------->
RAV1(1)
<
----
YAB1
<---------
YAB1
<---------
ANAC58
<---------
AtMYB61
--------->
ANAC58
<------
ZmHOX2a(1)
ataatttcattgagtcttatgatgatgataatgtggaagagcgtggatggttacagtagtggttgggtcaatgctcgagccacattctatggaggagctg
22826200
<------
NtERF2
------>
NtERF2
<---------
HSFB2a(2)
--------->
HSFB2a(2)
----------->
RAV1(2)
----------->
GT1
---------
ANAC58
----------->
HVH21
<-----------
GT1
--
At4g35610
<---------
ANAC58
<----------
DOF2
<---------
YAB1
->
At4g35610
----------->
GT1
------>
ZmHOX2a(1)
<---------
YAB1
----------->
HVH21
---------
ANAC58
<---------
ANAC58
<---------
DAG2
<---------
YAB1
<-
atgcttctggcaccatgg
gtaatttgcttactcctctctgacactttatagttatatcattcttattttctgaccaatataacttcaaacttcaaatttc
22826300
<---------
AHL20(2)
<---------
YAB1
----------->
HVH21
--------->
AHL20(2)
<---------
TOE2(3)
----------->
GT1
<---------
AHL20(2)
<---------
TOE1(3)
<---------
MYB46(3)
--------->
AHL20(2)
---------->
DOF2
--------->
ALFIN1
<---------
ICU4
--------->
ANAC46
<---
<------
ZmHOX2a(1)
--------->
ATHB12
--------->
ICU4
------->
TEIL
<------
--------
TOE1(2)
<---------
YAB1
--------->
AHL20(2)
<---------
CCA1(2)
<---------
YAB1
ttaggaattttaaagtttttattagtgagtggtgacaattaatatgctactaattaatatgctacataagtttgtatctacacaagtcttatttttgtgt
22826400
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AGI:
At5g56320.1
Description:
ATEXPA14 (ARABIDOPSIS THALIANA EXPANSIN A14). Identical to Expansin-A14 precursor (EXPA14) [Arabidopsis Thaliana] (GB:Q9FMA0;GB:Q0WLD1;GB:Q8L9W7); similar to ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15) [Arabidopsis thaliana] (TAIR:AT2G03090.1); similar to expansin [Pyrus pyrifolia] (GB:ABQ45887.1); contains InterPro domain Expansin 45, endoglucanase-like (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A (InterPro:IPR005132); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Expansin; (InterPro:IPR002963); contains InterPro domain Pollen allergen/expansin, C-terminal (InterPro:IPR007117)
Range:
from: 22825867
to: 22827463
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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