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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
WOX13(2)
<---------
WOX13(2)
<---------
AHL20(2)
--------->
AHL25(3)
--------->
AHL25(1)
--------->
AHL12(3)
<---------
AHL12(3)
<---------
AHL25(1)
--------->
AHL20(2)
--------->
AHL25(3)
<---------
AHL25(2)
<---------
AHL20(2)
--------->
AHL25(2)
--------->
YAB1
<---------
AHL12(2)
<---------
AHL20(2)
--------->
AHL12(3)
<---------
AHL25(3)
<---------
AHL25(2)
--------->
AHL25(2)
<---------
AHL25(1)
<---------
AHL12(3)
--------->
AHL25(1)
<---------
AHL20(2)
<---------
AHL20(1)
<---------
AHL12(1)
--------->
AHL20(2)
--------->
AHL12(3)
<---------
YAB1
<---------
AHL25(2)
<-----------
GT1
--------->
AHL25(3)
--------->
AHL25(2)
--------->
AHL12(1)
--------->
AHL20(3)
<---------
AHL25(3)
<---------
AHL20(3)
--------->
AHL25(2)
<---------
AHL25(2)
--------->
AHL25(1)
<---------
AHL20(2)
<---------
AHL25(1)
--------->
AHL25(3)
--------->
AHL25(3)
--------->
DAG2
<---------
WOX13(2)
--------->
DOF5.7(1)
--------->
WOX13(2)
<---------
WOX13(2)
<---------
YAB1
----
RAV1(1)
--------->
DOF5.7(1)
<------
ZmHOX2a(2)
---------->
DOF2
gtatatgagacatttacacatatcgttggaaaaactgcaattaattttaatttcgatcaaactcccagttaaaaaaaaaaaaagtattattttcaatgta
22825500
----------->
RAV1(2)
===================
RAV
<---------
At4g35610
<---------
WOX13(2)
<---------
WRKY12
<------
MYB46(1)
<---------
AtMYB61
<---------
AHL12(2)
--------->
WRKY18(1)
--------->
YAB1
<-----------
HVH21
-
<----------
DOF2
<---------
ANAC55(2)
<---
<---------
ANAC58
--------->
ANAC46
<---------
WRKY45
<----
<---------
ANAC58
--------->
ANAC58
<---------
WRKY12
<----
<---------
ANAC46
--------->
ANAC58
<---------
WRKY38(1)
<-----
<-----------
RAV1(1)
<---------
LBD16
<-----------
HVH21
<---------
--------->
WOX13(1)
--------->
ICU4
<------
MYB83
--------->
At4g35610
----------->
GT1
--------->
RVE1(2)
--------->
HSFB2a(2)
----------->
GT1
----------->
RAV1(1)
---------->
DOF2
<
aaactatcaatctatgtggcttttggaattataaacacgggaggtcaaatggtcaactgagccccataatatgaggtctaagtttcaaaagtaaaaccct
22825600
<---------
ANAC55(2)
<---------
ANAC58
<---------
ANAC46
<---------
ANAC55(1)
------>
MYB83
--------->
WOX13(2)
------>
MYB46(1)
-------->
AHL20(2)
<---------
ANAC58
------
DOF5.7(1)
--------->
ANAC55(2)
<---------
ANAC58
---------->
DOF2
-----
DOF5.7(1)
<---------
ANAC58
<---------
ANAC58
<---------
TOE2(3)
------
DOF2
<---------
AHL20(2)
<---------
ANAC58
<---------
YAB1
<-----------
GT1
----
DOF5.7(1)
<-----------------------
TaNAC69(2)
<---------
MYB59
---------->
DOF2
--
GT1
--------->
AHL20(2)
<---------
ANAC46
--------->
WOX13(2)
---------
AHL20(2)
--------->
REM1(2)
<---------
At4g35610
<---------
WOX13(2)
----------
ttttaaatagcataaaattgcgtgaagaagttggcactctcgatgctgcttgctcgttaccaaattggagtttattaaagtaaagttttacaaattgtac
22825700
<-----
<-------
<--------
<--------
<--------
---------
<--------
<--------
---------
---------
---------
<--------
---------
--------->
AHL20(2)
--------->
AHL12(1)
<---------
AHL12(1)
<---------
AHL25(1)
--------->
AHL25(2)
<---------
AHL25(2)
--------->
AHL25(3)
<---------
AHL20(2)
<---------
AHL25(3)
<---------
AHL12(3)
--------->
AHL12(3)
--------->
AHL25(1)
------------>
CBF
--------->
AHL25(2)
<-------
TEIL
<---------
AHL20(2)
--------->
RVE1(2)
<---------
AHL25(2)
<------
ZmHOX2a(2)
<---------
ICU4
<---------
AHL12(3)
<---------
GATA12
<---------
AHL12(3)
--------->
AHL25(3)
<---------
ARR11(2)
<---------
AHL25(1)
<---------
AHL20(3)
<---------
ARR11(3)
<---------
AHL12(2)
--------->
AHL12(3)
--------->
AGP1
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL12(2)
--------->
ARR11(2)
<---------
ZAT14
--------->
AHL12(3)
--------->
AHL12(2)
--------->
ARR11(3)
<---------
ZAT18
--------->
AHL20(3)
--------->
AHL20(3)
------>
ZmHOX2a(1)
--------->
AHL20(2)
--------->
YAB1
--------->
YAB1
==============
HOX2a_HOX2a
--------->
ZAT14
<---------
AHL20(3)
--------->
AHL20(2)
--------->
RVE1(2)
---------->
DOF2
<---------
YAB1
<---------
WOX13(2)
--------->
YAB5
-
----->
AtSPL8
--------->
GATA12
<---------
ICU4
<---------
At4g35610
--------->
AtLEC2
--------->
AHL12(2)
tactatctcctaatagatccataaaacaatttaaaaattactagtgtagtttagctaataaaaatcacttgcaatgcaagtgtttgattaaaaataattt
22825800
<---------
AHL12(2)
<---------
AHL25(3)
--------->
AHL25(1)
<---------
AHL25(1)
--------->
AHL25(2)
<---------
AHL25(2)
<---------
AHL12(3)
--------->
AHL12(3)
<---------
AHL20(2)
--------->
AHL12(3)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(1)
--------->
AHL25(1)
<---------
AHL25(1)
<---------
AHL25(3)
--------->
AHL25(3)
--------->
AHL25(2)
<---------
AHL25(2)
<---------
AHL12(1)
--------->
AHL12(1)
--------->
AHL12(2)
<---------
AHL12(2)
--------->
AHL12(2)
--------->
AHL12(3)
<---------
AHL25(2)
--------->
AHL25(2)
<---------
AHL20(3)
--------->
AHL20(3)
--------->
AHL25(3)
<---------
YAB1
----
AHL20(2)
--
AHL12(2)
-
AHL12(3)
-
AHL25(2)
-
AHL25(3)
<---------
ICU4
>
AHL25(1)
<---------
YAB5
<--
-
AHL12(1)
--------->
YAB1
---
-
AHL25(1)
<---------
AHL20(2)
---
>
AHL20(1)
<---------
HSFC1(2)
--------->
KAN1
<-----
>
AHL20(2)
<---------
HSFB2a(1)
----------->
RAV1(1)
<--------
>
AHL25(2)
--------->
HSFC1(2)
--------->
YAB1
*
TSS
<--------
-
AHL20(2)
--------->
HSFB2a(1)
<---------
CCA1(2)
<---------
DOF5.7(1)
>
AHL12(1)
<-----------
GT1
<---------
AHL12(2)
<---------
KAN1
<-----------
ARR10
-------->
YAB1
<----------
DOF2
----------->
TBP
------>
ZmHOX2a(1)
<---------
CCA1(2)
aagtataattttttttcttttgcagaaatttcttctatatataatcatcccatctcctcataactc
acaacaacattgaaacccatttcttcgcctttaa
22825900
<---------
DOF5.7(1)
<---------
DOF5.7(1)
<----------
DOF2
<---------
DOF5.7(1)
------>
ZmHOX2a(1)
<-----------
RAV1(1)
<---------
ANAC58
<---------
DOF5.7(1)
<---------
ANAC58
<---------
PCF2
-------
MYB59
<---------
ANAC58
------>
TOE1(3)
<---------
MYB46(3)
--------->
ANAC46
--------->
KAN1
------>
TOE2(3)
--------->
ALFIN1
--------->
ANAC58
<---------
ATHB12
------
GT1
<---------
ANAC46
--------->
ANAC58
--------->
GATA12
-
DOF5.7(1)
<---------
ANAC58
<----------
DOF2
--------->
At4g35610
------>
ZmHOX2a(1)
--
DOF2
--------->
AHL12(1)
<-----------
GT1
<---------
At4g35610
--------->
TOE2(3)
ccttacttgaatttttgtgtgggtcctttttttttctttctccaagccatt
gtaagctccaatcttccacattctatctcttcttcctcattttcttcca
22826000
--------------->
AGL15
<---------
YAB1
----------------->
AGL3
<
<---------
AHL12(3)
--
<---------
AHL20(2)
<---------
ANAC58
--------->
DAG2
<-
<---------
AHL25(1)
--------->
DAG2
--------->
DOF5.7(1)
<-
--------->
AHL12(3)
---------->
DOF2
--------->
DOF5.7(1)
<--
--------->
AHL20(1)
<---------
YAB1
---------->
DOF2
-----
--------->
AHL25(3)
<---------
YAB5
<---------
KAN1
-----
<---------
AHL20(1)
--------->
ANAC55(2)
<------
ZmHOX2a(1)
------
--------->
AHL12(3)
<---------
AHL20(2)
<---------
ANAC58
--------->
DOF5.7(1)
<-----
<-------
TEIL
<-----------
GT1
--------->
YAB1
<---------
ANAC46
<------
NtERF2
----------->
GT1
tacatacacacatatatatttctgttaccatttaagtgatcataaagttttcttgtgtag
gaataaaaaggcagagaaa
atggagttttttggtaaaatg
22826100
<---------
WRKY12
<---------
WRKY38(1)
<------
MYB83
--------->
WOX13(2)
<------
MYB46(1)
<---------
WOX13(2)
<---------
ANAC46
--------->
ATHB12
<---------
MYB46(3)
<---------
AHL20(2)
--------->
ZAT6
--------->
WRKY18(1)
<---------
YAB1
--------->
YAB1
<-------
GAMYB
--------->
MYB59
---------
WOX13(2)
--------->
YAB5
--------->
YAB5
<--------
P
------->
AHL12(1)
<---------
YAB1
<------
MYB83
--------->
MYB55(2)
--------
ICU4
--------->
YAB1
----------->
GT1
<------
MYB46(1)
--------
AHL12(1)
--------->
YAB5
<------
MYB46(1)
<------
MYB83
--------->
KAN1
-------
YAB1
--------->
ICU4
<---------
MYB46(3)
<-----------
HVH21
<
---->
YAB1
<---------
YAB1
--------->
ALFIN1
--------->
ATHB12
--------->
ANAC58
<-------
---->
YAB5
--------->
YAB5
<---------
ANAC58
<---------
MYB46(3)
----------->
RAV1(1)
<
----->
GT1
--------->
YAB1
<---------
ANAC58
<---------
AtMYB61
--------->
ANAC58
--------
----
YAB1
<---------
YAB1
<---------
ANAC46
<---------
YAB5
--------->
ANAC46
<------
ZmHOX2a(1)
ataatttcattgagtcttatgatgatgataatgtggaagagcgtggatggttacagtagtggttgggtcaatgctcgagccacattctatggaggagctg
22826200
<------
NtERF2
------>
NtERF2
--------->
HSFB2a(2)
----------->
HVH21
<---------
HSFB2a(2)
--------->
KAN1
----------->
RAV1(2)
<---------
ANAC58
--------->
YAB5
---------
ANAC58
<---------
ANAC58
----------->
GT1
<-----------
GT1
--
At4g35610
<---------
WOX13(2)
<----------
DOF2
<---------
YAB1
---------
ANAC58
--------->
WOX13(2)
<---------
DAG2
<---------
YAB1
->
At4g35610
----------->
GT1
------>
ZmHOX2a(1)
<---------
YAB1
----------->
HVH21
<-
atgcttctggcaccatgg
gtaatttgcttactcctctctgacactttatagttatatcattcttattttctgaccaatataacttcaaacttcaaatttc
22826300
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL25(1)
--------->
AHL25(1)
<---------
AHL25(3)
<---------
AHL12(1)
--------->
AHL12(1)
--------->
AHL20(2)
<---------
AHL25(3)
<---------
AHL20(3)
<---------
AHL12(3)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
WOX13(2)
<---------
AHL12(3)
<---------
WOX13(2)
<---------
AHL25(3)
----------->
GT1
<---------
WOX13(2)
<---------
YAB1
----------->
HVH21
--------->
WOX13(2)
<---------
TOE2(3)
<---------
MYB46(3)
<---------
ICU4
<---------
TOE1(3)
--------->
ALFIN1
--------->
ICU4
--------->
ANAC46
---------->
DOF2
--------->
ATHB12
--------->
KAN1
------->
TEIL
<---
<------
ZmHOX2a(1)
<---------
YAB5
--------->
AHL25(1)
--------->
KAN1
--------->
ARR11(2)
<------
--------
TOE1(2)
<---------
YAB1
--------->
AHL12(2)
<---------
AHL20(3)
<---------
CCA1(2)
<---------
YAB1
ttaggaattttaaagtttttattagtgagtggtgacaattaatatgctactaattaatatgctacataagtttgtatctacacaagtcttatttttgtgt
22826400
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AGI:
At5g56320.1
Description:
ATEXPA14 (ARABIDOPSIS THALIANA EXPANSIN A14). Identical to Expansin-A14 precursor (EXPA14) [Arabidopsis Thaliana] (GB:Q9FMA0;GB:Q0WLD1;GB:Q8L9W7); similar to ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15) [Arabidopsis thaliana] (TAIR:AT2G03090.1); similar to expansin [Pyrus pyrifolia] (GB:ABQ45887.1); contains InterPro domain Expansin 45, endoglucanase-like (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A (InterPro:IPR005132); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Expansin; (InterPro:IPR002963); contains InterPro domain Pollen allergen/expansin, C-terminal (InterPro:IPR007117)
Range:
from: 22825867
to: 22827463
Orientation: Forward
Links:
TAIR
MIPS
AIP
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publications
when using AthaMap.
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