Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    <---------ARR11(3)                                                  --------->ARR11(3)                                            <-------TEIL                                        -----                     --------->MYB52(1)--------->YAB1<----------DOF2                   --------->AHL20(2)               --------->ICU4          --------->AHL20(2)                              <---------AHL20(2)     <---------ARR11(3)       ---------->DOF2--------->ANAC46                ---------->DOF2  <------     --------->ARR11(3) <----------ID1 <---------AHL20(2)                 --------->YAB1      -------   ttctgaagctcttggtcataactaaacggacaaaaagacaattatatacgtagacctttggttttattttggtctattgtaaagtttgtttaaatttccg  22752700                                                                           <---------YAB1                                                                         <---------ICU4                                                                         --------->YAB1                                                                         -------->HAHB4                                                                        --------->ICU4                                                                      <---------ICU4      <---------MYB52(2)                                           --------->YAB1      --------->MYB46(3)                                      --------->At4g35610                   <   <------ZmHOX2a(1)        ---------->DOF2                  --------->ARR11(3)   --------->DAG2 <--- ---->LBD16   <---------LBD16                                <---------ARR11(3)  ---------->DOF2 ---- -----------AGL1      <---------YAB1            <-----------GT1    <---------ANAC55(2)       <------- ---------->AGL1  <----------DOF2              --------->AHL20(2)  --------->ANAC55(2)     --------->ICU4   agtgaggaacaaacatcgcggtttatgtttgaaagttgaaactctctaatttactagtaccaagagcttacataattatgaaataaagttggaataatgt  22752800        --------->MYB52(2)        --------->MYB59      <---------MYB52(1)     <-------GAMYB    --------->MYB55(2)    <---------MYB46(3)                                                                              <    <------MYB83                                                                               ------    <------MYB46(1)                                                                 <----------ID1---  <--------P                                                                --------->YAB1     ------ -----------RAV1(1)                                           <---------------------WRI1       ------ ----TEIL--------->At4g35610                               <---------HSFB2a(1)      ----------->GT1-- --->TEIL<---------At4g35610   --------->REM1(1)  <---------YAB1           ----------->GT1     ------ --------AtSPL8           ----------->GT1        --------->YAB1   --------->ANAC46---------->DOF2 <--   acatgttggttagctacttgtttacattcagttacaactcgtagttaacaatattactgaaatgttcgacgtaaacaatgaaaaaaaagaaaaaaacacg  22752900 ------NtERF2 --->ANAC55(1)                                                       --------->ICU4 ------>ARR14(2)                             <---------YAB1     ----------->GT1 --->ANAC58                               --------->ARR14(2)   <---------TOE2(3) --->ANAC58                               <---------ARR14(2)--------->AHL20(1) ---->NtERF2                            --------->WOX13(1) --------->YAB1 --->ANAC46                         --------->MYB59    <---------AHL20(2)          <----------DOF2--- -------ARR14(2)             <-----------------AGL1    --------->AHL20(2)      <----------DOF2 ------   gctccgaattgttgttcatacttctcaatcggtctaattaggcaattacgcttaaaattaaaaataatgtaattctttcttctttctttcaaaacaatta  22753000                                                                              <---------ZAT2                                                                            <-----------RAV1(2)                                                                    <-------GAMYB<-------TEIL                                                                   <---------DEAR3(1)                                                                   <---------ANAC46                                                                  <------NtERF2  --------->ZAT18                                                                  --------->ATERF1(1)                                                                 <---------ORA47(2)                                                                 <---------DEAR4(2)                                                                 <---------RAP2.3(1)                              --------->ZAT14                    <---------ERF1  <---------ZAT18                              --------->REM1(2)                  <---------ATERF1(1)                         <---------ZAT14                         ------>NtERF2<---------At4g35610                         --------->ZAT14                        <---------RAP2.3(3)                      <---------At5g28300                       --------->ATERF1(1)          --------                --------->AHL20(1)                              <---------RAP2.3(2)        <---------LBD16                --------->ARR11(3)         --------->ANAC46     <---------RAP2.6(2)      --------->ARR14(2)                <---------AHL20(1)         --------->ANAC58     <---------DEAR3(1)   <---------TOE2(2)      ----------->GT1<-----------GT1       --------->ANAC58    --------->ATERF1(1)   <---------TOE1(2) ------>TOE2(3) <---------ARR11(3) <----------ID1              <---------ABI4(1)--------->ALFIN1 --->AHL20(2)  --------->YAB1 <---------ZAT14                 --------->ALFIN1--------->At4g35610  <-   cattagtttagtaacaaaaatattcactgcagtgaagacgacaaaacgccatcgttttgggaaggggcggcgttgaagacaggtgcgcatgtttccgcgt  22753100                                                                                       <---------AHL20(2)                                                                                       <---------ICU4                                                                                       -------->HAHB4                                                                               <---------AHL20(2)                                                                               --------->AHL20(2)                                                                          <---------AHL20(1)                                                                          <---------AHL20(2)                                                                          --------->AHL20(2)                                                                      <---------AHL20(2)                                                                     <---------YAB1   --------->ICU4                                                                    <---------AHL20(2)<---------YAB1     --------->At4g35610                                       <---------AHL20(1)   --------->YAB1     <---------At4g35610  ------->TEIL     <---------SPL7      --------->AHL20(2)  --------->AHL20(2) ->LBD16       --------->LBD16           *TSS                  <---------AHL20(2)  <---------YAB1 <-- --------YAB1<---------LBD16     --------->YAB1    <----------DOF2<---------YAB1   <---------AHL20(2)   tattctaagctgtaatccggacaaaatgtatgtaatagtcatcgacggaccatcttttattctattttatttttattttatttatataattattctctct  22753200                                                           ========================HOX2a_HOX2a                                                           ------>ZmHOX2a(2)                                                          =========================HOX2a_HOX2a                                                          <------ZmHOX2a(2)                                                          <---------GLK1(1)                                                          --------->GLK1(1)                                                         <---------ARR14(2)           ---------->DOF2                                                         --------->AGP1             ------>MYB83                                                         <-----------ARR10          ------>MYB46(1)                                                         <---------AGP1            ----------->RAV1(1)                                                         --------->ARR11(3)       ------->GAMYB                                                         --------->ARR14(2)      <---------MYB52(2)                                                         <---------ARR11(3)      --------->MYB46(3)<-            <---------ANAC58                            --------->At4g35610 ------>ZmHOX2a(1)      --            <---------ANAC58                            <---------CCA1(2) =====================RAV <- --------DOF2                                      <---------GLK1(1)      ----------->RAV1(2)      --   ctttcatcttcgtggtttgccatagctcttcttgaatcaaggtcgtcttcttgaaatcagatctcttcgtgacttctcctgtaaccaacaaagaaccatg  22753300    ------>ZmHOX2a(1) --------At4g35610                                                                                 <- ------->GLK1(1)                                                              <-------TEIL<-------TEIL --------GLK1(1)<----------DOF2                   <----------DOF2         <---------------AtSPL8<---- ------->At4g35610      <----------DOF2    <----------DOF2         <-------TEIL       <-------TEIL <-   gagctcctctctagagctcttttcttctttcttctactctcagttctttcttctttctcttcttcaagtttcatttcaggtacacacatacatacacact  22753400                                --------->MYB52(2)                            <------MYB46(1)                           <---------AtMYB61         <---------HSFB2a(2)<------MYB83              ---------->ID1         <---------HSFC1(1)--------->MYB59  --------->TOE2(3)         --------->HSFB2a(2)<---------MYB46(3)     <-----------GT1                  ------->TEIL<---- ---------->ID1        <---------MYB46(3)  --------->YAB1                          <---------CCA1(2)< --------ANAC58        <------MYB83        <---------ICU4             --------->At4g35610       <---- ------DOF2            <------MYB46(1)    <---------YAB1              <---------At4g35610      ------ --------ANAC58    <-----------RAV1(1)    --------->ICU4      <---------YAB1       <---------GLK1(2)<   ttcgtcttattctcgaacaaattgttggtttggttagatgggtcatcatcaattttctcgttttcttattgcagatggggtcttcgaatctcagagtttg  22753500                                                                                                 ----                                                                                           <--------ATHB1                                                                                           -------->HAHB4                              --------->ANAC58                                             <---------ICU4                              --------->ANAC58                                             --------->ATHB12                             --------->DAG2                                               --------->ICU4 --MYB83                    ---------->DOF2                       <-----------GT1         <---------YAB1 ---------ANAC58         --------->ANAC58                        <---------ZAT14          <---------ATHB12 --MYB46(1)    <---------ANAC58                                 <----------DOF2          <---------TOE2(3) --->MYB59     <---------ANAC58                     ------>ZmHOX2a(1)       --------->AHL20(2)   ---- ---------ANAC58         --------->ANAC58  <---------CCA1(2)<---------CCA1(2)   <-----------GT1  ----   gttcttggcagaaacttgcttcagaccaagaaaagcaagtttcttaaatctctcctcttcccataactttactgttttttatatactttctaatgattcc  22753600  Previous    Next  AGI:  At5g56160.1    Description:  transporter. similar to SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [Arabidopsis thaliana] (TAIR:AT1G55690.2); similar to SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [Arabidopsis thaliana] (TAIR:AT1G55690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45191.1); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); contains InterPro domain Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273); contains InterPro domain Phosphatidylinositol transfer protein-like, N-terminal (Inter Range:  from: 22749200    to: 22752816    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g56170.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G26466.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69731.1) Range:  from: 22753141    to: 22754537    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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